Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01637 ATGTTTTTCAAGAGTCACCGCAACAATGGCGGACTTGGCGCACTCGAATTCCATATTCTGATCCTACGGCCACCATCTCAACAACACCACCAAATGTGCGGGGAGGACTTGCCTAATATTCATAATTATTTCATGGATTCGTATTTCGGAAACACCGTGATGAAGTTGGCTTTGAAAGAAGACCCTGAAGAGCATCGTATTGCATTGTTTATCTTGCTTCTCTGTGCTTGTATTGTACTTGGGCATCTTCTTGAAAAAAGTCGTTGGATAAATGAATCAGTCACTGCCATTTTCATTGGTCTTTTCACTGGAACTCTCATCTTAGTAACCACCAAAGGCAGAAACTCACATATACTAGTGTTTAGTGAAGAACTTTTCTTCATTTATGTTCTTCCACCTATAATTTTTAATGCCGGGTTTCAGGTGAAAAAAAAGCAGTTCTTTCGAAACTTTCTAATGATCATGTTGTTTGGGGCTGTTGGTACTGTGATCTCATTTTTCATCATTTCACTCGGTTCGCTCCATTTATTCAAGAAATTTGATATTGGCTTCTTAGACGTGGGTGATTATTTCGCCCTTGGAGCAATCTTATCAGCCACAGATAGTGTTTGTACCTTGCAGGTGCTTAATCAGGATGAGACTCCTTTACTGTATAGTCTAGTCTTCGGTGAAGGTGTGGTTAATGATGCTACTTCTGTCGTACTTTTCAAAGCATTCCAGAGATTCAACCTCTCTGACGTCACCTCTTCCAACGCCATCCAGCTTCTTGGAAACTTTTTCTATCTATTTTTTACAAGCACCTTGCTGGGAGTAATTGTTGGGCTTTCCAGTGCATACATCATAAAGAAACTGTACTTTGGCAGGCACTCAACTGATCGGGAGGTTGCTTTGATGATTTTGATGCCTTACCTTTCGTATATGATTGCTGAATTGTGCTATCTAAGTGGCATTCTTACTATGTTCTTTTGTGGGATTGTCATGTCTCATTACACTTGGCATAATGTGACTGAAAGTTCACGAGTTACAACCAAGCATACTTTTGCAACATTGTCATTTGTTTCCGAGATTTTCATCTTCTTATATGTTGGTATGGATGCCTTGGATATTGAGAAGTGGAAAGTTGTTGGCCAAAGGCCTTGGACATCGGCTGGAGTGAGTCTAATACTGCTTGGTTTAGTCCTTGTTGCGAGAGCAGCTTTTGTATTTCCACTCTCTTTTATATCGAACTTGACTAGAAAGTCTCAAACTGACAAAGTTGGGTTTAAGCAGCAGGTTACAATTTGGTGGGCTGGGCTCATGAGAGGTGCTGTATCTGTGGCCCTTGCTTATAATCAGTTTACAAGGTCAGGGCACACACAACTGCAAGGGAATGCGATTATGATTACTAGCACAATCACAATTGTCCTCATCACTAATGTGGTGTTTGGACTACTAACACAACCTATTGTGAGGCACATGCTTTCCCTGCATGATACACAAATAGATGGCATAATGCTAGCAGATTCTCCACTTAAGTCCCTGAATGATCCTCTTATGCCTGGTGTCGATGATTCCGAATCTGATATTGGAGGAACAAACATTCCCCGACCTACCAGCTTGCGGATGCTGTTGACAACTCCAACTCGTTCTGTCCATTACTATTGGCGGATGTTCGATGATCGGTATATGCGACCTGTTTTTGGTGGAAGAGGTTTTGTACCTTTCATCCCTGGTTCACCAACTGAAAGGTATATCCATTGA 1740 41.44 MFFKSHRNNGGLGALEFHILILRPPSQQHHQMCGEDLPNIHNYFMDSYFGNTVMKLALKEDPEEHRIALFILLLCACIVLGHLLEKSRWINESVTAIFIGLFTGTLILVTTKGRNSHILVFSEELFFIYVLPPIIFNAGFQVKKKQFFRNFLMIMLFGAVGTVISFFIISLGSLHLFKKFDIGFLDVGDYFALGAILSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAFQRFNLSDVTSSNAIQLLGNFFYLFFTSTLLGVIVGLSSAYIIKKLYFGRHSTDREVALMILMPYLSYMIAELCYLSGILTMFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVSEIFIFLYVGMDALDIEKWKVVGQRPWTSAGVSLILLGLVLVARAAFVFPLSFISNLTRKSQTDKVGFKQQVTIWWAGLMRGAVSVALAYNQFTRSGHTQLQGNAIMITSTITIVLITNVVFGLLTQPIVRHMLSLHDTQIDGIMLADSPLKSLNDPLMPGVDDSESDIGGTNIPRPTSLRMLLTTPTRSVHYYWRMFDDRYMRPVFGGRGFVPFIPGSPTERYIH* 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22338932 22347521 - Chy1G016370.1 Chy01g01637 218818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01637 579 PRINTS Na+/H+ exchanger signature 125 136 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy01g01637 579 PRINTS Na+/H+ exchanger signature 139 153 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy01g01637 579 PRINTS Na+/H+ exchanger signature 154 162 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy01g01637 579 PRINTS Na+/H+ exchanger signature 194 204 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Chy01g01637 579 Pfam Sodium/hydrogen exchanger family 70 484 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Chy01g01637 579 PANTHER SODIUM/HYDROGEN EXCHANGER 54 578 IPR018422 GO:0006812|GO:0015299|GO:0016021
Chy01g01637 579 Gene3D - 187 238 - -
Chy01g01637 579 PANTHER SODIUM/HYDROGEN EXCHANGER 54 578 - -
Chy01g01637 579 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 66 518 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01637 Chy-Chr1:22338932 Chy02g01126 Chy-Chr2:7962646 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01637 - K14724 csv:101206431 1019.22