Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01665 ATGAGGAGAAAATCCAAAACCCTAAGAACCACGATGGGGGCGAGGAGGAAGAGGATGAAAGGGACAGTGACGAGGCACTTGCAGGTTCACTTAGGGAAAGTTTCCCTTGCTCCTCTTCACCTCCACAGCTCCTCTTCCTCCGCTCTTTGCTTCCCGAACTTGCCTGAATCTGAGCCTCCCTCCACGGTCAACGTTTCTGATCCGCTTCCTTCCTCATCTCATAACTTTGAGGACAGAGATTTCATTCTTAGCCAAGACTTCTTCTGCACCCCTGATTATATCACCCCGGATAATCAAAATTTGTTGAATGGAGTGGATAGCAACAAGGAATGCATTCCCTGCCCCAAATCTCCAGAGAAGATTAATACTGTTAAAACTAAGAGAAAAATACATGAAAATGTTTTAGTACGTCCCCTGAGTCCGAGTTTGTCTGGCTGCGAACAAGTTGTGGAACTTGGAAATGACATTTTTGGATCAGATGACGTGGATATGGAGAAAGAGACCACGGCCATGCCGAAGAAAGAAAACTATGTATCTCAATCTGCAGTTGCTCTTCGCTGTCGAGTTATGCCTCCTCCTTGCATGAAGAACCCATACTTGAAAGATGCATCAGATGTTGGTGTAGATCCATTTGGCAATCAACGAACTAAATGTGCAGGATTTTTTCCTGCGTTATTTAGTGGAGATGGTCTTTCAAGATATCACACTGATTTTCATGAGATAAAGCTAATAGGAACTGGAAATTTTAGTCGTGTCTTCAAGGTATTAAAGAGAATTGATGGCTGCTTATATGCTGTTAAACAAAGCACAAGACCATTGAATCAAGACACGGAAAGGAGGAGAGCTTTGATGGAGGTTCAAGCTTTGGCAGCTTTAGGGTCTCATGAAAACATTGTTGGATACTATACCTCATGGTTTGAAAATGAACAACTCTACATTCAAATGGAGCTCTGTGATTGTAGTTTATCAATGGGCAGGTATTCTCACCCATTCTCTGAGGTAGATGCGCTAGGAGCCTTGTATCAGATTGCAAAGGCATTGCTATTTGTGCACGAGAAAGGAATAGCTCATTTAGATGTGAAACCTGACAATATTTATATCAAAGATGGTGTCTATAAACTTGGTGATTTTGGGTGTGTTACCCTTCTTGATAAGAGTCTGCCTATTGAGGAGGGTGATGCACGCTATATGCCTCAAGAAATTCTGAATGAAAGATATGATTATCTTGATAAAGTTGATATTTTCTCCTTGGGAGCTGCTATTTATGAGATTGTCAGAGGATTCACATTACCAGAAACGCATTTCATGAACCTTAAGGAGGGAAAATTGCCACTCCTTCCTGGTCATTCATTGCAATTCCAAAACTTAATCAAGGCTATGGTGGATCCCGACCCAACACGGCGTCCTTCGGCAAGGGAAGTTCTTGAGAATCCGATATTTGATAAGGTCAGAACTCACAAACAATCGTAG 1470 42.18 MRRKSKTLRTTMGARRKRMKGTVTRHLQVHLGKVSLAPLHLHSSSSSALCFPNLPESEPPSTVNVSDPLPSSSHNFEDRDFILSQDFFCTPDYITPDNQNLLNGVDSNKECIPCPKSPEKINTVKTKRKIHENVLVRPLSPSLSGCEQVVELGNDIFGSDDVDMEKETTAMPKKENYVSQSAVALRCRVMPPPCMKNPYLKDASDVGVDPFGNQRTKCAGFFPALFSGDGLSRYHTDFHEIKLIGTGNFSRVFKVLKRIDGCLYAVKQSTRPLNQDTERRRALMEVQALAALGSHENIVGYYTSWFENEQLYIQMELCDCSLSMGRYSHPFSEVDALGALYQIAKALLFVHEKGIAHLDVKPDNIYIKDGVYKLGDFGCVTLLDKSLPIEEGDARYMPQEILNERYDYLDKVDIFSLGAAIYEIVRGFTLPETHFMNLKEGKLPLLPGHSLQFQNLIKAMVDPDPTRRPSAREVLENPIFDKVRTHKQS* 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22598960 22603069 - Chy1G016650.1 Chy01g01665 218846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01665 489 SMART serkin_6 238 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01665 489 PANTHER BNAA08G27310D PROTEIN 409 485 - -
Chy01g01665 489 PANTHER BNAA08G27310D PROTEIN 45 396 - -
Chy01g01665 489 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 45 396 - -
Chy01g01665 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Chy01g01665 489 Gene3D Transferase(Phosphotransferase) domain 1 317 485 - -
Chy01g01665 489 ProSiteProfiles Protein kinase domain profile. 238 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01665 489 Gene3D Phosphorylase Kinase; domain 1 228 316 - -
Chy01g01665 489 SUPERFAMILY Protein kinase-like (PK-like) 231 484 IPR011009 -
Chy01g01665 489 ProSitePatterns Protein kinases ATP-binding region signature. 244 267 IPR017441 GO:0005524
Chy01g01665 489 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 409 485 - -
Chy01g01665 489 Pfam Protein kinase domain 238 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01665 Chy-Chr1:22598960 Chy06g00475 Chy-Chr6:3173791 1.45E-21 dispersed
Chy01g01665 Chy-Chr1:22598960 Chy06g00957 Chy-Chr6:7050402 1.38E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71002 PF00069 Pkinase 9.50E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01665 K06632 - csv:101213255 964.526