Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01724 ATGTCTTCCGATTCTCATGCCCCTACTCCAAGGGGTCTTCTCTGTAATGCTGGAGCTGGTGCTGCTGCTGGTGTTCTTGCTGCTACGTTTGTGTGCCCTTTGGATGTCATCAAGACTAGATTTCAGGTTCATGGATTGCCAAACATCGGTAAAGGGAGTCTTATAGTTGGGAGTCTGCAACAAATTTTTCATAAGGAGGGGCTACGTGGAATGTATAGAGGTCTTGCACCTACTGTGCTTGCATTACTGCCTAACTGGGCTGTTTATTTCACAATATATGGGCAGCTTAAAACCTTTCTTGCCTCTGATCATGAACATTGTCAGCTTTCAATAGGTGCTAATATGATGGCTGCTTCTGGTGCTGGGGCTGCTACAACTATTGCAACCAATCCTCTATGGGTAGTCAAGACCAGGCTTCAGACACAAGGAATGAAATCTGGTGTGCTACCATATAGAAATACAGTGTCTGCCTTAAAGAGAATAGCATCTGAAGAAGGAATTCGTGGATTGTACAGTGGTCTTGTGCCTGCTTTGGCCGGTGTAAGTCACGTTGCGATTCAGTTTCCAACATATGAAAAAATTAAAAGTTATTTGGCTAGAAGAGACAATACAACAACGGACAAACTCACTGCACGTGATGTTGCAGTTGCCTCATCTGTTTCTAAGATATTTGCTTCCACGTTGACCTATCCACATGAGGTCGTACGATCCAGGCTTCAGGAACAGGGGTTTCACTCTGAAAAGCGTTATTCTGGCGTAGCCGATTGCGTAAAGAAAGTATTTCAGCAAGATGGTCTTCCCGGTTTCTATCGAGGGTGTGCAACCAACCTTCTCAGGACAACGCCTGCTGCTGTCATCACATTTACCAGCTTTGAAATGATTCACCGATTTCTTGCCAACTTATTTCCTCCCGATCCACATCCACACACATTATGA 936 44.66 MSSDSHAPTPRGLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPNIGKGSLIVGSLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTIYGQLKTFLASDHEHCQLSIGANMMAASGAGAATTIATNPLWVVKTRLQTQGMKSGVLPYRNTVSALKRIASEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKSYLARRDNTTTDKLTARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGFHSEKRYSGVADCVKKVFQQDGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLANLFPPDPHPHTL* 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23024676 23028127 - Chy1G017240.1 Chy01g01724 218905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01724 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 297 IPR018108 -
Chy01g01724 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 99 IPR018108 -
Chy01g01724 311 Gene3D Mitochondrial carrier domain 1 105 IPR023395 -
Chy01g01724 311 Gene3D Mitochondrial carrier domain 106 301 IPR023395 -
Chy01g01724 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Chy01g01724 311 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 1 310 - -
Chy01g01724 311 SUPERFAMILY Mitochondrial carrier 13 293 IPR023395 -
Chy01g01724 311 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 310 IPR044712 GO:0006862|GO:0055085
Chy01g01724 311 Pfam Mitochondrial carrier protein 109 200 IPR018108 -
Chy01g01724 311 Pfam Mitochondrial carrier protein 15 102 IPR018108 -
Chy01g01724 311 Pfam Mitochondrial carrier protein 215 299 IPR018108 -
Chy01g01724 311 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Chy01g01724 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Chy01g01724 311 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085
Chy01g01724 311 PRINTS Mitochondrial carrier protein signature 124 142 IPR002067 GO:0055085
Chy01g01724 311 PRINTS Mitochondrial carrier protein signature 218 240 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01724 Chy-Chr1:23024676 Chy09g00893 Chy-Chr9:11700638 1.26E-131 dispersed
Chy01g01724 Chy-Chr1:23024676 Chy03g01130 Chy-Chr3:14566422 3.16E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01724 K15115 - csv:101204681 601.668