Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g01787 | ATGGTGGCTGAAGCTGAGGTTGTTGTTTGTTCGAAGAGCCTCCCGGTTTTGGAGGTCCCGTATTTTGGTAAAGAGACTTGTCTTGTTGATGAAATTGAGTCCATCGATGGTGGGATTTCGATTGATCCGACTCTTGATCGTGTTCGTGCTTCCGAGTCGGTTTGTTCCAGTTCTCAATCGGATAAACCCATGAAGAAAATTCCAGACTCCGAGGTCGATGCGGCCAACGGAAGGGAATTTCCGAGCCTCCGGTCGGGAAGTTTTGCTGATATTGGACCTAGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTATCTTCACATTTAGGATCGCTCTTTAAGTTTCCCAAGCCAAGTGCTTTCTATGGGGTGTTTGATGGACATGGAGGTCCTGAAGCGGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTCGAGGATGTTAGTTTCCCACAAATTCCAGATATCGATGAAGTCTTGCCGGAGGAGATTGAAACTTGCCTTCGAAAAGCATTTCTTCTTGCTGATCGAGCTCTTGCTGATGATTCCAGTGTCAGCAGCTCATCCGGGACGACGGCCCTGACAGCTCTTGTTCTTGGAAGGCTTTTAATGGTGGCAAATGCTGGAGACTGCCGAGCAGTTCTCAGCCGGAATGGAGAGGCAGTAGATATGTCTCAGGACCACCGGCCGGTATATTCTCTAGAGAAGCAACGAGTAGAAGAGTTGGGTGGCTATGTTGATGGTGGCTATCTCAATGGTGTTTTATCGGTTTCTAGGGCCTTAGGGGATTGGGACATGAAGCTCCCAGATGGTTCTCCTTCACCTCTCATTGCAGAACCAGAATGCAGGCAGATGGTTCTTACAGAAGAGGATGAGTTCTTGATCATAGCCTGCGACGGTATATGGGATGTGATGTCAAGCCAGCAAGCAGTCAATGTAGTTCGCCAGGGACTTCAACGCCACGACGACCCTGAGCGGTGTGCAAGAGACCTTGTCCTGCAGGCTTTGCGATTAGACTCGTTCGATAACCTAACTGTTGTTGTTGTTTGCTTCTCTAGTTTCCATCCCGGCAATTCTCCACTAACGCAGCAGCGGAAGTTACGATACTGCAGTCTCTCAGCACAGGCTCTTTGTAGCTTGCAAAAATGGTTGGATAACAGTGGATGCCAATGA | 1182 | 47.72 | MVAEAEVVVCSKSLPVLEVPYFGKETCLVDEIESIDGGISIDPTLDRVRASESVCSSSQSDKPMKKIPDSEVDAANGREFPSLRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVSFPQIPDIDEVLPEEIETCLRKAFLLADRALADDSSVSSSSGTTALTALVLGRLLMVANAGDCRAVLSRNGEAVDMSQDHRPVYSLEKQRVEELGGYVDGGYLNGVLSVSRALGDWDMKLPDGSPSPLIAEPECRQMVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARDLVLQALRLDSFDNLTVVVVCFSSFHPGNSPLTQQRKLRYCSLSAQALCSLQKWLDNSGCQ* | 394 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 23499833 | 23501467 | + | Chy1G017870.1 | Chy01g01787 | 218968 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g01787 | 393 | PANTHER | PROTEIN PHOSPHATASE 2C 49-RELATED | 1 | 372 | - | - | |
Chy01g01787 | 393 | SUPERFAMILY | PP2C-like | 80 | 356 | IPR036457 | - | |
Chy01g01787 | 393 | ProSiteProfiles | PPM-type phosphatase domain profile. | 84 | 354 | IPR001932 | - | |
Chy01g01787 | 393 | CDD | PP2Cc | 84 | 354 | IPR001932 | - | |
Chy01g01787 | 393 | SMART | PP2C_4 | 74 | 352 | IPR001932 | - | |
Chy01g01787 | 393 | Pfam | Protein phosphatase 2C | 94 | 346 | IPR001932 | - | |
Chy01g01787 | 393 | ProSitePatterns | PPM-type phosphatase domain signature. | 123 | 131 | IPR000222 | GO:0043169 | |
Chy01g01787 | 393 | SMART | PP2C_SIG_2 | 99 | 354 | IPR001932 | - | |
Chy01g01787 | 393 | Gene3D | - | 64 | 358 | IPR036457 | - | |
Chy01g01787 | 393 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 372 | IPR015655 | GO:0004722|GO:0006470 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01787 | Chy-Chr1:23499833 | Chy07g00305 | Chy-Chr7:2510023 | 4.49E-42 | dispersed | |
Chy03g01706 | Chy-Chr3:18639985 | Chy01g01787 | Chy-Chr1:23499833 | 2.08E-37 | transposed | |
Chy05g01245 | Chy-Chr5:16855973 | Chy01g01787 | Chy-Chr1:23499833 | 2.13E-85 | transposed | |
Chy07g00407 | Chy-Chr7:3226570 | Chy01g01787 | Chy-Chr1:23499833 | 1.33E-98 | transposed | |
Chy01g01787 | Chy-Chr1:23499833 | Chy11g01602 | Chy-Chr11:22569796 | 2.51E-130 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g01787 | K14803 | - | csv:101216626 | 741.88 |