Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01802 ATGGACGATAGCTGTGCTGTGTGTGCCGATACTCTCGAATGGGTTGCCTATGGGTCTTGCGGCCATCGGGATGTTTGCTCCACCTGCGTTGCTCGTCTTCGATTCATTTGTGGTGATCGCCGTTGTTGCATCTGCAAGTCCGAATCCGCTGTCGTGTTTGTCTCTAAGGCCTTGGGAGATTATACAAGGACGATTAACGACTTCACAGTCTTTCCTTCAGAACCAAAAGAGGGTCGTAGTGGATCCTATTGGTATCATGAAGACACACAAACATTTTTTGATGATGCTGACCACTACAAGATGATAAAAGCAATGTGTAGGTTGTCATGCAGTGTGTGTGATAAGATAGGTGAAGATCAACCAAATGATGCCTCAAAGCGCCGAGGAAGATTTCGGAATATTGAGCAGCTAAAGGGTCATTTGTTTCATCGACATAAGTTGTTTATGTGCAGCCTTTGTCTGGAAGGCAGGAAGGTTTTTATTTGTGAACAGAAGCTATATAATAGAGCACAATTGAATCAGCATATACACACTGGTGACTCTGAGGTGGACGGAAGTGAGAGTGAGAGAGGTGGTTTCACTGGGCACCCTATGTGTGAATTTTGCAGAACTCCATTTTATGGAGATAATGAGTTGTATACTCATATGTCAACTGAGCATTATACATGTCACATATGCCAAAGGCTCCACCCTGGACAGTATGAATACTATAAGAATTATGATGACCTAGAGATCCATTTCCGACAAGGACATTTTCTTTGTGAAGATGAAGCCTGCCTTGCTAAAAAGTTTGTTGTGTTCCAATCTGAAGCAGAAATGAAGAGGCACAATACTATTGAACATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTTCGATATCGAAGAAGTAACGAGCAAGATAATCGTCGTGGTAGACGAACATTTCGTCGTGATTCTTCGGATGATCTACTTTCTTTGGCCCTTCAAGAAAGTTTTGTAACAGCCAATGTTGATGACAACAATCATGACCCATTACCTAGTGGACAAGTAGCCTCAGATCAGGAAAATTTAAGCAACGTTGACCCATTGATTGAATCATTTGAAGCATTAGCAACTACAGATCCTGAATCAGCTTCTCGATACCTTCAAGCCTTGGGCCATTCTAGGAATTCCCAATTGGAGCAATCATCCTTTCCTCCCCTTTCAACTGCATCTAGCAGTAGCCATCCAAAGCCCAATCAGGACAAAGACATTATACATAATAACAGTATGGCAGCTCATCTTCGGCGCCAGAGGAATAATGTGACCGTTCTAAATTCTGCAGGTTGGCCAAAATCAAGTCGTGCCCCTGTGTTACCATCAAATAACTCATCTCAAGCTTGGCCAGCAATAAATTCCAATCATGCAGCTTCAAGCAGTTCTGGGCAGACTAAGGGGGTTGCCACCATTAATAATGGCCCTTCAGTCTCTGCTTATGCAAATGCCGCTCAGATGCATCCAAAGCCTCGATCTAGTTCTTCAAGTGGATCAGGCAGTAGCAGTAGGATCAGCCACTCTGCTTCCGCGCCGAATCTCACTGACATTGCACATACCGAACCATCGGTTAACGAATTCCCTCCAGTATCTGCAGCACAGGCTCGGAAAGTGCCATCAAGTAGCCAAAGTTCAATGAACATGGAAGATGTCCAGACAGCAAACAAATCTCTAGTTGAAAAGATACGTGCTGCACTTGATTTTGACCAAGATAGATATGCCATTTTTAAAGATATATCTGCACAATATCGTCAGGGTCAGATTGACACGGAAATGTATCTAGACTGCGTGCAACAGTTTGGTTTGTCGCATCTTTTGCTTGAGTTGGCTAGGCTCTGTCCTGATCCTCAGAAACAGAAAGAACTTGTGGAGACCTACAACGCTAGTTTTCATAAAGATGTGTTCCCAGTCAATGGTAGGGCTCAAGATAGTATTCAAATTAAAGACAAAAGTAAGGGGAAAAAAGGTAAAGGGAAATCTATTGAAGTTAAAGACAGCAGTTCCAAAGACAAATTAGCAGATAGTATCTTGAGCAGTGTTCGGGAACTGCAGTCAAGTTACAGGCCACCAGAGGAAGATGTAGAGGTATTACCAAAGGGTGAGTATCGTACTTCGAAAGGGAAACTGAAGATATCTTCTGACGGGACAGGAGGACAAAAAAGTCAACCATCTACTGGTCTATCGAACCAAAGCACTGGGGATGGTGGTGGTGGTGGTGGTGGGGGGAGCAAACAAAAAAAGAAAACTTCCAAGTTTCATAGAGTTCGTTTAGGTGATGGATCGGTTGCTGCACTCTTGGATCTAAAAAACTCCAATCTCGGTTCAGACCCTGACCCAGATGAAAGAGTAGAGGACAGGAACAATGCTGCAGGGGCATTGCCTGTTCAGGGCGTTTGGCGAAATGGAGCCCAAAAGCTCTTCTCCTAG 2466 43.88 MDDSCAVCADTLEWVAYGSCGHRDVCSTCVARLRFICGDRRCCICKSESAVVFVSKALGDYTRTINDFTVFPSEPKEGRSGSYWYHEDTQTFFDDADHYKMIKAMCRLSCSVCDKIGEDQPNDASKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEIHFRQGHFLCEDEACLAKKFVVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNEQDNRRGRRTFRRDSSDDLLSLALQESFVTANVDDNNHDPLPSGQVASDQENLSNVDPLIESFEALATTDPESASRYLQALGHSRNSQLEQSSFPPLSTASSSSHPKPNQDKDIIHNNSMAAHLRRQRNNVTVLNSAGWPKSSRAPVLPSNNSSQAWPAINSNHAASSSSGQTKGVATINNGPSVSAYANAAQMHPKPRSSSSSGSGSSSRISHSASAPNLTDIAHTEPSVNEFPPVSAAQARKVPSSSQSSMNMEDVQTANKSLVEKIRAALDFDQDRYAIFKDISAQYRQGQIDTEMYLDCVQQFGLSHLLLELARLCPDPQKQKELVETYNASFHKDVFPVNGRAQDSIQIKDKSKGKKGKGKSIEVKDSSSKDKLADSILSSVRELQSSYRPPEEDVEVLPKGEYRTSKGKLKISSDGTGGQKSQPSTGLSNQSTGDGGGGGGGGSKQKKKTSKFHRVRLGDGSVAALLDLKNSNLGSDPDPDERVEDRNNAAGALPVQGVWRNGAQKLFS* 822
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 23584848 23589718 + Chy1G018020.1 Chy01g01802 218983
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01802 821 CDD RING-HC_ZNF598 5 46 IPR041888 -
Chy01g01802 821 PANTHER EBR1 1 819 - -
Chy01g01802 821 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Chy01g01802 821 MobiDBLite consensus disorder prediction 658 680 - -
Chy01g01802 821 MobiDBLite consensus disorder prediction 722 749 - -
Chy01g01802 821 PANTHER ZINC FINGER PROTEIN 598 1 819 IPR044288 GO:0061630|GO:0072344
Chy01g01802 821 SMART c2h2final6 108 145 IPR013087 -
Chy01g01802 821 SMART c2h2final6 221 251 IPR013087 -
Chy01g01802 821 SMART c2h2final6 252 281 IPR013087 -
Chy01g01802 821 SMART c2h2final6 197 220 IPR013087 -
Chy01g01802 821 MobiDBLite consensus disorder prediction 781 821 - -
Chy01g01802 821 MobiDBLite consensus disorder prediction 699 721 - -
Chy01g01802 821 MobiDBLite consensus disorder prediction 695 769 - -
Chy01g01802 821 MobiDBLite consensus disorder prediction 442 561 - -
Chy01g01802 821 MobiDBLite consensus disorder prediction 390 420 - -
Chy01g01802 821 MobiDBLite consensus disorder prediction 442 494 - -
Chy01g01802 821 MobiDBLite consensus disorder prediction 654 680 - -
Chy01g01802 821 MobiDBLite consensus disorder prediction 501 533 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01802 K22381 - csv:101214376 1514.21