Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01820 ATGGATTCTGGAAACCTCTCCTCCTCCTCCTCCTTGCCCCCTCCAATTTCCGCCGGACACTTTGGGCTCCGGTCGCTCCTCGATGTCCAAATCTTAGAGATCTCTTTCGCCCTTTTCGTGTTCTTGGTTATTCATGTTGTTAGACAGAAGAGACGACACGGCTTGCCTATATGGCCAATCGTTGGAATGTTACCAGCTTTGATTACAGCAACACGTGGGAATCTCTACGAGTGGATTACCGACCTCTTGTGTCGTCACAAGGGCACATTTCAATTTCGAGGTCCATGGCTTACTAGTCTCAACTGCGTTGTCACGGCTGATCCTCGAAACTTAGAACACCTTCTCAAGACAAAATTTTCTTCCTACCCAAAAGGGTCGTTCTTCCGCGACACTGTGAGAGACTTACTTGGTGATGGAATATTCGGGGCTGATGACGAGACGTGGCAACGACAGAGGAAGGTGGCGAGCATTGAGTTTCACTCGGCAAGGTTTCGACAAATGACGGTGGAGTCGTTGGTGGAGCTTGTGCACTCGAGGCTGGAAGCAGTGTTAGAGGATTTCGAGGGGCAATCAACAACGGTGGACTTGCAGGATGTTCTATTGAGGTTGACGTTTGATAATGTGTGTATGATTGCCTTTGGGGTGGATCCCGGTTGCTTGGGCAGCGGCTTGCCGGAGATTCCATTTGCTAAAGCCTTTGAGGATGCAACTGAAGTCACTGTTATACGCTTCATCACACCTACATTCATATGGAAATTCATGAGGTACCTGAACATAGGAATTGAAAAGAAGCTGAAGCAATCGATCAAAGCCGTCGACGAATTTGCGGAGGACGTGATTCAAACACGGAAGAGAGAACTCTCTACGCCGGCGGAATCTCAAGCTGACAACCAAAGATCCGACCTATTAACTGTATTCATGAAGCTAAGGGACGAGCAAGGGCGCCCATTCTCCGATAAGTTTCTCAGAGATATTTGCGTCAATTTCATACTCGCCGGAAGAGACACATCTTCCGTAGCATTGAGTTGGTTCTTCTTGTTGCTCGATCAAAATCCCGATGTAGAAGATAAAATTCTAGAAGAAATTTGCAGAATCGTCGGCGAACGAGAAGAGGCCAAAACCAGAGAGCTTCGATTCGATTCATTAGTGTTCAAACCAGAGGAGATAAAAAAAATGGAGTATTTGCACGCCGCCATTTCCGAAGCCCTAAGATTGTATCCATCAGTTCCATTCGATCACAAAGAGGTTGTGGAGGACGATGTATTCCCAGACGGAACGGTTCTGAAGAAAGGAACGAAAATCATCTACGCAATATACGCAATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAGAGATGGATGAGAGAAAATCGATTCATGAGCGAATCGGCATATCGATTCACCGCCTTCAATGGCGGCCCTCGGCTGTGTCTTGGAAAGGATTTTGCGTATTACCAAATGAAATACGTGGCCGCTTCTATCATCAGCCGGTACCGGGTGGCGGTGGTGACGGGGCATCCGGTGGAGCCGAAGCTCGCCCTAACTTTCTACATGAAAAAGGGCTTGAAGGTCAATTTGATCAAACGAGAAGAGGGGCAACTTCGGAAATACATTAAGTTAAATTGA 1647 47.3 MDSGNLSSSSSLPPPISAGHFGLRSLLDVQILEISFALFVFLVIHVVRQKRRHGLPIWPIVGMLPALITATRGNLYEWITDLLCRHKGTFQFRGPWLTSLNCVVTADPRNLEHLLKTKFSSYPKGSFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHSRLEAVLEDFEGQSTTVDLQDVLLRLTFDNVCMIAFGVDPGCLGSGLPEIPFAKAFEDATEVTVIRFITPTFIWKFMRYLNIGIEKKLKQSIKAVDEFAEDVIQTRKRELSTPAESQADNQRSDLLTVFMKLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFLLLDQNPDVEDKILEEICRIVGEREEAKTRELRFDSLVFKPEEIKKMEYLHAAISEALRLYPSVPFDHKEVVEDDVFPDGTVLKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWMRENRFMSESAYRFTAFNGGPRLCLGKDFAYYQMKYVAASIISRYRVAVVTGHPVEPKLALTFYMKKGLKVNLIKREEGQLRKYIKLN* 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23717694 23720006 - Chy1G018200.1 Chy01g01820 219001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01820 548 PANTHER CYTOCHROME P450 19 537 - -
Chy01g01820 548 SUPERFAMILY Cytochrome P450 54 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PANTHER CYTOCHROME P450 86B1-LIKE 19 537 - -
Chy01g01820 548 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Chy01g01820 548 Pfam Cytochrome P450 55 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 Gene3D Cytochrome P450 50 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g01820 548 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01820 Chy-Chr1:23717694 Chy09g01238 Chy-Chr9:14437368 8.78E-158 dispersed
Chy02g00988 Chy-Chr2:6600556 Chy01g01820 Chy-Chr1:23717694 5.60E-118 dispersed
Chy02g00989 Chy-Chr2:6606812 Chy01g01820 Chy-Chr1:23717694 5.89E-116 dispersed
Chy02g02656 Chy-Chr2:29595310 Chy01g01820 Chy-Chr1:23717694 3.08E-109 dispersed
Chy06g00227 Chy-Chr6:1485687 Chy01g01820 Chy-Chr1:23717694 2.99E-106 dispersed
Chy12g00710 Chy-Chr12:10630154 Chy01g01820 Chy-Chr1:23717694 3.12E-107 dispersed
Chy01g01820 Chy-Chr1:23717694 Chy04g01221 Chy-Chr4:18752791 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01820 K15402 - csv:101212202 1065.06