Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g01864 | ATGGAACATGCAGAATCTTCGGCAAAGGTTATAAAGAACATGGGCCCCAATGCCTGTCAAATATGTGGAGACCATGTCGGGAAGACCGTCGAGGGCGAGCCATTTGTTGCTTGTTATGTTTGTACATTTCCTGTGTGCAGACCATGCTACGAGTACGAGAGAAAAGATGGGAATCAGTCTTGTCCTCAATGCAAAAGCAGATACAAGAGGCACAAAGGAAGTCCTGCTGTTCTAGGTGATGACGAGGCTGCTGAGCTTGATGATGATGATGATGATGCAATTGATTTAAATTACATTTCTGAAAGTCAAAAACAGAAGCAGAAGATTGCGAAACGAATGATGAGCTGGCAGATGTCATATGGACATGCACAAGATCTCCCCCCACCGAACTACGACAAAGAAGTTTCTTTAAATCACATACCCTTGCTCACCAATGGGCAGGAGGTTTTTGGAGAACTGTCAGCTGCATCACCTGAGCATCATTCGATGGCATCTCCTGGACATCCTCGTGGGAAGCCAATATATTCTCTTCCTTATGCAGCTGACATTAACCAATCACCTAATGTGCAAGGTGTGGACCCTACAAAAGAGTATAGTTCATCGGGGCTAGGCAATGTAGCTTGGAAAGAGAGAGTTGATGGCTGGAAGATGAAACAGGAGAAGAATGCTGGACCAATGAGCATAGCCCATGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCCTGCACAGATGTGCTTGTTGATGACTCCTTACTAAATGATGAAGCACGCCAGCCTCTCTCGCGAAAGGTTTCTGTTCCATCATCTAGGATAAACCCTTACAGGATGGTGATTGTTCTGCGGCTTGTAATTATTTGTTTTTTCTTGCACTACCGAATCACGAATCCAGTACGCAATGCATATGCTTTATGGCTGGTATCTGTTATATGTGAGATTTGGTTTGCAATATCCTGGATATTAGATCAGTTCCCGAAGTGGCTTCCTGTTAACCGTGAGACATATTTAGACCGGCTTGCATTAAGATATGATAGGGAAGGAGAACCATCACAGCTTGCTGCTGTTGACATTTTTGTGAGTACTGTCGACCCACTGAAGGAGCCTCCACTTGTCACAGCCAACACTGTACTGTCTATTCTTGCTGTTGACTACCCGGTTGACAAGGTCTCGTGCTATGTTTCTGATGATGGAGCTGCCATGTTGACATTTGAAGCATTATCCGAAACATCAGAGTTTGCAAGGTCATGGGTGCCTTTCTGCAAGAAATACAGCATCGAGCCTCGGGCTCCAGAGTGGTACTTTGCTCAGAAAATTGATTACTTGAAGGATAAAGTCGATCCATCATTTGTCAAAGATCGGAGAGCAATGAAGAGAGAATACGAAGAATTTAAGGTCCGCATCAACGGATTGGTATCAAAGGCACAGAAAGTTCCCGAAGAAGGATGGGTCATGCAAGATGGAACTCCATGGCCCGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGGCAAAACGGTGGACTGGATACCGATGGTAATGAGTTGCCTCGTTTAGTCTATGTATCTCGTGAAAAACGTCCAGGGTTCCAACATCATAAGAAAGCTGGTGCAATGAATGCTCTTGTAATGTCGAATAGCTACAAGAAAGTTATCTTTTTCCCCCTTAAACAGGTTAAATTTCTTAGAGTAACGTTCATTATATTTATGCAGGTTCGAGTATCTGCTGTTCTTACCAATGGCCCATTCTTGTTGAATCTTGACTGTGATCACTACATAAACAACAGCAAGGCATTGAGGGAAGCAATGTGTTTTATGATGGATCCAAACCTTGGCAAATACGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATTGATAAAAATGATCGATATGCCAACCGAAATACTGTGTTCTTTGATATAAATTTAAGAGGTTTAGATGGCCTACAAGGTCCAGTTTATGTGGGTACTGGATGTGTCTTCAACAGAACTGCACTGTATGGTTACGAACCTCCGCTCAAACCAAAGAATCGGAAAACAGGATTTCTGTCTTCGCTCTGTGGCGGATCTCGAAAGAAGAAAGCGAAATCAAGTAAAACGAGCCCAGACAAGAAGAAATCAAGCAAGCATATTGATCCAACAGTGCCAATTTTCAATCTCGACGACATTGAAGAAGTGGTTGAAGGTGCTGGATTTGATGATGAGAAGTCCTTGCTAATGTCACAAATGACCCTGGAACAAAGGTTTGGCCAGTCTTCTGTTTTTGTTGCCTCAACCCTTATGGAAAACGGTGGTGTTCCTCAATCCGCAACGCCCGAGTCTCTTCTGAAGGAGGCTATTCATGTCATTAGTTGTGGATATGAAGATAAAACGGACTGGGGATCTGAGATTGGATGGATTTATGGCTCTGTCACTGAAGATATTCTTACAGGATTCAAGATGCATGCTCGTGGTTGGCGGTCGATTTATTGTATACCACAACGTCCTGCCTTTAAAGGGTCTGCACCTATTAATCTTTCAGATCGATTAAACCAAGTGCTTCGATGGGCTCTCGGTTCGGTGGAGATTCTTCTAAGTAGGCATTGCCCTATCTGGTATGGCTATGGTGGAAGGCTCAAATGGCTCGAACGGTTTGCATATGTGAACACTACAATATATCCGATCACCTCGGTTCCTCTTCTCATGTATTGTACCTTACCAGCCGTGTGTCTACTAACGAACAAGTTCATTATTCCCCAGATAAGTAACATTGCAAGTATATGGTTTTTAGCCCTCTTCCTCTCCATTTTTGCAACGGGCATTCTTGAGATGAGATGGAGTGGGGTTGGGATAGACGAGTGGTGGAGAAACGAACAATTTTGGGTCATTGGAGGTGTTTCAGCTCACCTGTTTGCTGTTTTCCAAGGTCTGCTTAAGGTTCTTGCCGGTATCGACACCAACTTTACGGTGACATCCAAGGCGTCTGACGAAGATGGGGATTATGCTGAGCTTTACATGTTCAAATGGACGACACTTCTCATCCCACCAACTACACTCCTCATCGTAAACTTGGTCGGGGTCGTAGCGGGGATATCTTACGCAATCAACAGCGGATACCAATCATGGGGACCGTTGTTTGGCAAGCTATTTTTCGCTTTTTGGGTGATCATTCATCTCTATCCATTCTTGAAAGGTTTGATGGGTCGTCAAAACAGAACACCCACCATCGTCGTCGTGTGGTCGATTCTACTTGCTTCCATCTTCTCCCTGTTATGGGTGAGGATAGATCCGTTCACCACAACGGTCATAGGGCCCGACGTAGAGGAGTGTGGAATCAACTGCTAG | 3339 | 44.29 | MEHAESSAKVIKNMGPNACQICGDHVGKTVEGEPFVACYVCTFPVCRPCYEYERKDGNQSCPQCKSRYKRHKGSPAVLGDDEAAELDDDDDDAIDLNYISESQKQKQKIAKRMMSWQMSYGHAQDLPPPNYDKEVSLNHIPLLTNGQEVFGELSAASPEHHSMASPGHPRGKPIYSLPYAADINQSPNVQGVDPTKEYSSSGLGNVAWKERVDGWKMKQEKNAGPMSIAHAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLVIICFFLHYRITNPVRNAYALWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARSWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVDPSFVKDRRAMKREYEEFKVRINGLVSKAQKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQNGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVMSNSYKKVIFFPLKQVKFLRVTFIIFMQVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPLKPKNRKTGFLSSLCGGSRKKKAKSSKTSPDKKKSSKHIDPTVPIFNLDDIEEVVEGAGFDDEKSLLMSQMTLEQRFGQSSVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPQRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSVPLLMYCTLPAVCLLTNKFIIPQISNIASIWFLALFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDYAELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTTVIGPDVEECGINC* | 1113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 24061213 | 24066858 | + | Chy1G018640.1 | Chy01g01864 | 219045 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g01864 | 1112 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 574 | 675 | IPR029044 | - | |
Chy01g01864 | 1112 | MobiDBLite | consensus disorder prediction | 685 | 716 | - | - | |
Chy01g01864 | 1112 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 574 | 1112 | - | - | |
Chy01g01864 | 1112 | SUPERFAMILY | RING/U-box | 5 | 89 | - | - | |
Chy01g01864 | 1112 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 369 | 934 | IPR029044 | - | |
Chy01g01864 | 1112 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 7 | 547 | - | - | |
Chy01g01864 | 1112 | PANTHER | CELLULOSE SYNTHASE | 7 | 547 | - | - | |
Chy01g01864 | 1112 | PANTHER | CELLULOSE SYNTHASE | 574 | 1112 | - | - | |
Chy01g01864 | 1112 | Pfam | Cellulose synthase | 355 | 548 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Chy01g01864 | 1112 | Pfam | Cellulose synthase | 575 | 1103 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Chy01g01864 | 1112 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 93 | IPR013083 | - | |
Chy01g01864 | 1112 | Pfam | Zinc-binding RING-finger | 10 | 83 | IPR027934 | - | |
Chy01g01864 | 1112 | CDD | mRING-HC-C4C4_CesA_plant | 19 | 67 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01864 | Chy-Chr1:24061213 | Chy08g00458 | Chy-Chr8:11169563 | 0 | dispersed | |
Chy05g00831 | Chy-Chr5:11939933 | Chy01g01864 | Chy-Chr1:24061213 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g01864 | K10999 | - | csv:101206590 | 2154.41 |