Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01864 ATGGAACATGCAGAATCTTCGGCAAAGGTTATAAAGAACATGGGCCCCAATGCCTGTCAAATATGTGGAGACCATGTCGGGAAGACCGTCGAGGGCGAGCCATTTGTTGCTTGTTATGTTTGTACATTTCCTGTGTGCAGACCATGCTACGAGTACGAGAGAAAAGATGGGAATCAGTCTTGTCCTCAATGCAAAAGCAGATACAAGAGGCACAAAGGAAGTCCTGCTGTTCTAGGTGATGACGAGGCTGCTGAGCTTGATGATGATGATGATGATGCAATTGATTTAAATTACATTTCTGAAAGTCAAAAACAGAAGCAGAAGATTGCGAAACGAATGATGAGCTGGCAGATGTCATATGGACATGCACAAGATCTCCCCCCACCGAACTACGACAAAGAAGTTTCTTTAAATCACATACCCTTGCTCACCAATGGGCAGGAGGTTTTTGGAGAACTGTCAGCTGCATCACCTGAGCATCATTCGATGGCATCTCCTGGACATCCTCGTGGGAAGCCAATATATTCTCTTCCTTATGCAGCTGACATTAACCAATCACCTAATGTGCAAGGTGTGGACCCTACAAAAGAGTATAGTTCATCGGGGCTAGGCAATGTAGCTTGGAAAGAGAGAGTTGATGGCTGGAAGATGAAACAGGAGAAGAATGCTGGACCAATGAGCATAGCCCATGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCCTGCACAGATGTGCTTGTTGATGACTCCTTACTAAATGATGAAGCACGCCAGCCTCTCTCGCGAAAGGTTTCTGTTCCATCATCTAGGATAAACCCTTACAGGATGGTGATTGTTCTGCGGCTTGTAATTATTTGTTTTTTCTTGCACTACCGAATCACGAATCCAGTACGCAATGCATATGCTTTATGGCTGGTATCTGTTATATGTGAGATTTGGTTTGCAATATCCTGGATATTAGATCAGTTCCCGAAGTGGCTTCCTGTTAACCGTGAGACATATTTAGACCGGCTTGCATTAAGATATGATAGGGAAGGAGAACCATCACAGCTTGCTGCTGTTGACATTTTTGTGAGTACTGTCGACCCACTGAAGGAGCCTCCACTTGTCACAGCCAACACTGTACTGTCTATTCTTGCTGTTGACTACCCGGTTGACAAGGTCTCGTGCTATGTTTCTGATGATGGAGCTGCCATGTTGACATTTGAAGCATTATCCGAAACATCAGAGTTTGCAAGGTCATGGGTGCCTTTCTGCAAGAAATACAGCATCGAGCCTCGGGCTCCAGAGTGGTACTTTGCTCAGAAAATTGATTACTTGAAGGATAAAGTCGATCCATCATTTGTCAAAGATCGGAGAGCAATGAAGAGAGAATACGAAGAATTTAAGGTCCGCATCAACGGATTGGTATCAAAGGCACAGAAAGTTCCCGAAGAAGGATGGGTCATGCAAGATGGAACTCCATGGCCCGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGGCAAAACGGTGGACTGGATACCGATGGTAATGAGTTGCCTCGTTTAGTCTATGTATCTCGTGAAAAACGTCCAGGGTTCCAACATCATAAGAAAGCTGGTGCAATGAATGCTCTTGTAATGTCGAATAGCTACAAGAAAGTTATCTTTTTCCCCCTTAAACAGGTTAAATTTCTTAGAGTAACGTTCATTATATTTATGCAGGTTCGAGTATCTGCTGTTCTTACCAATGGCCCATTCTTGTTGAATCTTGACTGTGATCACTACATAAACAACAGCAAGGCATTGAGGGAAGCAATGTGTTTTATGATGGATCCAAACCTTGGCAAATACGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATTGATAAAAATGATCGATATGCCAACCGAAATACTGTGTTCTTTGATATAAATTTAAGAGGTTTAGATGGCCTACAAGGTCCAGTTTATGTGGGTACTGGATGTGTCTTCAACAGAACTGCACTGTATGGTTACGAACCTCCGCTCAAACCAAAGAATCGGAAAACAGGATTTCTGTCTTCGCTCTGTGGCGGATCTCGAAAGAAGAAAGCGAAATCAAGTAAAACGAGCCCAGACAAGAAGAAATCAAGCAAGCATATTGATCCAACAGTGCCAATTTTCAATCTCGACGACATTGAAGAAGTGGTTGAAGGTGCTGGATTTGATGATGAGAAGTCCTTGCTAATGTCACAAATGACCCTGGAACAAAGGTTTGGCCAGTCTTCTGTTTTTGTTGCCTCAACCCTTATGGAAAACGGTGGTGTTCCTCAATCCGCAACGCCCGAGTCTCTTCTGAAGGAGGCTATTCATGTCATTAGTTGTGGATATGAAGATAAAACGGACTGGGGATCTGAGATTGGATGGATTTATGGCTCTGTCACTGAAGATATTCTTACAGGATTCAAGATGCATGCTCGTGGTTGGCGGTCGATTTATTGTATACCACAACGTCCTGCCTTTAAAGGGTCTGCACCTATTAATCTTTCAGATCGATTAAACCAAGTGCTTCGATGGGCTCTCGGTTCGGTGGAGATTCTTCTAAGTAGGCATTGCCCTATCTGGTATGGCTATGGTGGAAGGCTCAAATGGCTCGAACGGTTTGCATATGTGAACACTACAATATATCCGATCACCTCGGTTCCTCTTCTCATGTATTGTACCTTACCAGCCGTGTGTCTACTAACGAACAAGTTCATTATTCCCCAGATAAGTAACATTGCAAGTATATGGTTTTTAGCCCTCTTCCTCTCCATTTTTGCAACGGGCATTCTTGAGATGAGATGGAGTGGGGTTGGGATAGACGAGTGGTGGAGAAACGAACAATTTTGGGTCATTGGAGGTGTTTCAGCTCACCTGTTTGCTGTTTTCCAAGGTCTGCTTAAGGTTCTTGCCGGTATCGACACCAACTTTACGGTGACATCCAAGGCGTCTGACGAAGATGGGGATTATGCTGAGCTTTACATGTTCAAATGGACGACACTTCTCATCCCACCAACTACACTCCTCATCGTAAACTTGGTCGGGGTCGTAGCGGGGATATCTTACGCAATCAACAGCGGATACCAATCATGGGGACCGTTGTTTGGCAAGCTATTTTTCGCTTTTTGGGTGATCATTCATCTCTATCCATTCTTGAAAGGTTTGATGGGTCGTCAAAACAGAACACCCACCATCGTCGTCGTGTGGTCGATTCTACTTGCTTCCATCTTCTCCCTGTTATGGGTGAGGATAGATCCGTTCACCACAACGGTCATAGGGCCCGACGTAGAGGAGTGTGGAATCAACTGCTAG 3339 44.29 MEHAESSAKVIKNMGPNACQICGDHVGKTVEGEPFVACYVCTFPVCRPCYEYERKDGNQSCPQCKSRYKRHKGSPAVLGDDEAAELDDDDDDAIDLNYISESQKQKQKIAKRMMSWQMSYGHAQDLPPPNYDKEVSLNHIPLLTNGQEVFGELSAASPEHHSMASPGHPRGKPIYSLPYAADINQSPNVQGVDPTKEYSSSGLGNVAWKERVDGWKMKQEKNAGPMSIAHAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLVIICFFLHYRITNPVRNAYALWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARSWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVDPSFVKDRRAMKREYEEFKVRINGLVSKAQKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQNGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVMSNSYKKVIFFPLKQVKFLRVTFIIFMQVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPLKPKNRKTGFLSSLCGGSRKKKAKSSKTSPDKKKSSKHIDPTVPIFNLDDIEEVVEGAGFDDEKSLLMSQMTLEQRFGQSSVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPQRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSVPLLMYCTLPAVCLLTNKFIIPQISNIASIWFLALFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDYAELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTTVIGPDVEECGINC* 1113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24061213 24066858 + Chy1G018640.1 Chy01g01864 219045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01864 1112 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 574 675 IPR029044 -
Chy01g01864 1112 MobiDBLite consensus disorder prediction 685 716 - -
Chy01g01864 1112 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 574 1112 - -
Chy01g01864 1112 SUPERFAMILY RING/U-box 5 89 - -
Chy01g01864 1112 SUPERFAMILY Nucleotide-diphospho-sugar transferases 369 934 IPR029044 -
Chy01g01864 1112 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 547 - -
Chy01g01864 1112 PANTHER CELLULOSE SYNTHASE 7 547 - -
Chy01g01864 1112 PANTHER CELLULOSE SYNTHASE 574 1112 - -
Chy01g01864 1112 Pfam Cellulose synthase 355 548 IPR005150 GO:0016020|GO:0016760|GO:0030244
Chy01g01864 1112 Pfam Cellulose synthase 575 1103 IPR005150 GO:0016020|GO:0016760|GO:0030244
Chy01g01864 1112 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 93 IPR013083 -
Chy01g01864 1112 Pfam Zinc-binding RING-finger 10 83 IPR027934 -
Chy01g01864 1112 CDD mRING-HC-C4C4_CesA_plant 19 67 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01864 Chy-Chr1:24061213 Chy08g00458 Chy-Chr8:11169563 0 dispersed
Chy05g00831 Chy-Chr5:11939933 Chy01g01864 Chy-Chr1:24061213 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01864 K10999 - csv:101206590 2154.41