Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01866 ATGGCTATGGCTGGGCGTCTGAGATCGATCATTCCTCAATTCAATCAGCTTCTGAAATCGGAGTCACAGGCTCAGAGATCTGCTCTTTCAAGAGCCCTACTTTGCCCCACGACTGCCAACTCCGAGATCTCGAGGAACTATGCAACTTCTTCCAAGAAAAGCGAGGCAAAAGTTAAAGTTCCTCTGGTTTTGTTTGGGGGGACTGGAAACTATGCCTCTGCTTTGTACCTTGCAGCAGTAAAAGCTAATTCCTTGGATAAGGCTGAGAAAGAGCTTGTAGACTTTGCCGAGGCTTTAAAGAGAAGTGCCACCTTCTCTCAGTTCATTAGTGATCCCACAGTGCATAAAGATACCAAGGTCAAGGTTATTAGCGATGTTTGTGCTGATGCTAAGTTTTCAGAAATTATGAAGAACTTTTTGGCTGTATTGGCTGAGAATGGAAGGCTGAAATACGTAGACGGCATTGCAAAGAAGTTTCAAGAGTTGACAATGGCTCATAGAGGAGAGGTGAAAGCCATTGTGTCTACTGTTATTCCCCTCCCTGCTGAAGAAGAGAAAGAACTGAAGGAAACTTTACAGTATATTATTGGAGAGGGGAAAAAGGTCAAGCTTGAACAGAAGATTGATCCAAGTATTCTTGGCGGAATAGTAGTAGAATTTGGGGAGAAAGTGTTCGACATGTCGATCAAGACCCGAGCAAAACAGATGGAGCGGTTCTTGCGAGAACCTGTGAACTTCAACAGCCTCTGA 750 44.27 MAMAGRLRSIIPQFNQLLKSESQAQRSALSRALLCPTTANSEISRNYATSSKKSEAKVKVPLVLFGGTGNYASALYLAAVKANSLDKAEKELVDFAEALKRSATFSQFISDPTVHKDTKVKVISDVCADAKFSEIMKNFLAVLAENGRLKYVDGIAKKFQELTMAHRGEVKAIVSTVIPLPAEEEKELKETLQYIIGEGKKVKLEQKIDPSILGGIVVEFGEKVFDMSIKTRAKQMERFLREPVNFNSL* 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24086489 24090001 - Chy1G018660.1 Chy01g01866 219047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01866 249 Gene3D - 68 160 IPR026015 -
Chy01g01866 249 PRINTS ATP synthase delta subunit signature 200 215 IPR000711 GO:0015986|GO:0046933
Chy01g01866 249 PRINTS ATP synthase delta subunit signature 137 148 IPR000711 GO:0015986|GO:0046933
Chy01g01866 249 PRINTS ATP synthase delta subunit signature 215 233 IPR000711 GO:0015986|GO:0046933
Chy01g01866 249 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Chy01g01866 249 PRINTS ATP synthase delta subunit signature 148 162 IPR000711 GO:0015986|GO:0046933
Chy01g01866 249 Hamap ATP synthase subunit delta [atpD]. 63 242 IPR000711 GO:0015986|GO:0046933
Chy01g01866 249 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 68 169 IPR026015 -
Chy01g01866 249 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 202 221 IPR020781 GO:0015986|GO:0016020|GO:0046933
Chy01g01866 249 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 70 239 IPR000711 GO:0015986|GO:0046933
Chy01g01866 249 PANTHER ATP SYNTHASE DELTA CHAIN 31 242 IPR000711 GO:0015986|GO:0046933
Chy01g01866 249 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 31 242 - -
Chy01g01866 249 Pfam ATP synthase delta (OSCP) subunit 69 238 IPR000711 GO:0015986|GO:0046933
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g01866 Chy04g01284 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00265 Chy-Chr3:2705224 Chy01g01866 Chy-Chr1:24086489 1.26E-12 transposed
Chy01g01866 Chy-Chr1:24086489 Chy04g01284 Chy-Chr4:19377375 3.44E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01866 K02137 - csv:101206351 464.536