Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy01g01917 | ATGGGGACTCCGGTGAATATCATCGTCGGATCACATGTTTGGGTTGAGGATCCCGAGGATGCTTGGATTGAAGGTCAAGTTACAGAAATTAAGGGCAAAAATGCTACTATACTCACTACCAATGCAAAAACTATTGTTGCAGAAATTTCGAGTATATATCCGAAAGATACGGAGGCGCCGCCGGCGGGAGTTGACGACATGACGAAATTGGCGTATCTTCATGAACCAGGAGTTCTGCATAACCTAGCTTGTCGATTTTCTCTCAATGAGATATACACATACACTGGGAATATTCTAATTGCGGTGAATCCTTTCCGGAGACTGCCCCATTTGTATGATATTCACATGATGGAACAGTATAAAGGAGCTACTTTTGGCGAGCTTAGTCCGCATCTTTTCGCTGTTGCAGACGCTTGTTATAGATCGATGATTAACGAGCAAGGGAGCCAGTCTATATTAGTGAGTGGAGAGAGTGGTGCTGGTAAAACTGAGACAACAAAGATGCTCATGAGATATCTTGCATTCATGGGAGGAAGGTCAGATACTGAAGGAAGAACAGTTGAACAACAGGTTTTGGAGTCCAACCCTGTTCTGGAAGCATTTGGAAATGCCAAAACCGTCAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGGGCTGCCATTCGTACATACCTTCTCGAGCGGTCACGTGTTTGCCAAGTCTCAGACCCTGAGAGAAACTACCATTGTTTTTACATGCTCTGTGCAGCACCACCAGAAGATGTGAAGAAATTCAAGGTAGGAGACCCAAGGACATTTCATTATCTTAATCAAACGAATTGTTATGAAGTGGCGAATGTTGATGATTCAAGAGAGTACCTAGAGACGAGAAATGCCATGGATGTTGTCGGAATCAACCAGGATGAACAGGATGCTATATTTCGTGTTGTAGCTGCTATACTGCATCTTGGAAACATTGAATTCATGAAAGGGAAGGAAGTTGACTCCTCCAAAGTGAAAGACGAGAAGTCAAATTACCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTAAAGTCACTGGAACATTCGCTCTGCCAGCGTGTCATAGTGACCCCAGATGGCAACATTACGAAGCCTTTGGACCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTGTACTCTAGACTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCCAGCTTAATTGGTGTTCTTGATATTTATGGTTTTGAAAGCTTCAAGATCAACAGTTTTGAGCAGCTCTGTATCAACTTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGTTACACAAAAATAAATGTGCCTTCTCCGTGCAGCATGTTTTCAAGATGGAGCAAGAGGAGTATACGAAAGAAGAAATAAACTGGAGCTATGTTGAGTTTGTGGATAATCAGGATGTGCTTGATCTTATTGAGAAGAAACCTGGAGGTATAATCGCCCTGCTTGATGAAGCCTGTATGTTTCCGAAGTCAACACATGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGGACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAGACTTCACAATAAACCATTATGCTGGAGATGTTAAGTACCAAGCAGATCAATTTCTAGATAAAAACAAGGACTATGTAGTTGCAGAACATCAGGCTCTTCTAAATGCCTCGCAATGTTTCTTTGTTGCTAATCTTTTCCCTCCACTTCCTGAGGAGACTTCAAAGCAATCGAAGTTTTCTTCTATTGGTACTCGGTTCAAGCAACAACTACAAGCTCTCATGGAAACATTGAATACTACCGAACCACATTATATCAGATGTGTAAAACCCAACACAGTTTTGAAACCCGGTATCTTTGAGAACTACAACGTGTTGAACCAATTGAGGTGTGGGGGAGTGCTCGAGGCAATTAGAATAAGCTGTGCAGGATACCCAACAAAAAGAACATTTGATGAGTTCCTTGATCGTTTTGGAATGCTTGCTCCAGATATTTCGGACGGGTCTGACGAAAAATCAGCATGCATTGCAATATGTGACAGAATGGGCTTGAAGGGTTACCAGATTGGAAAAACAAAAGTGTTCCTCAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATTTTGGCTAATGCTGTCAGACTCATCCAGCGGCAAATCCGAACCTATCTAACTAGAAAAGAGTTCATTGCGCTGAGGAGAGCTACAATTCATTTGCAGAAACTTTGGAGAGGGCAACTTGCTCGTAAGCTGTATGAGCAAATGAGGAGAGAAGCAGCTTCAATCCGTATACAGAAGCATGCACGTGCTCACGCAGATAGAAAATCTTACAAAAGATTGCTTGCATCAGCTATAGTTATTCAAACTGGTATGCGTGCAATGGCAGCTAGAAATGAGTACAGGCACCGAAGAAGAACGAAGGCAGCTATCATTGTTCAGACTGAATGGCGAAGGGCATCAGCTATTTCAGCATACAAACAGCAGCAGAAGGCAACTCTTGCCCTTCAATGCCTCTGGCGATCTAAAGTTGCAAGGAAGGAGCTTAGAAAATTAAAGATGGCTGCAAGAGAAACAGGAGCACTCAAGGAGGCCAAGGACAAATTGGAGAAGCGTGTTGAGGAGCTAACATGGCGCCTAGAGTTTGAGAAGCACTTGAGGATGGATGTTGAAGAAGCTAAGGGACAAGAAGTCGCAAAGTTACAAAATGCTATGGAAGAAATGCAAGGGCAGCTGGATGAAGCCAATGCTGCAATTATACGTGAGAGAGAAGCAGCAAAATTGGCCATAGAACAAGCTCCACCAGTCATTAAGGAAGTACCTGTGGTAGACGAGACAAAGCTAGAAATACTGAGAAATCATAATGAAGAACTTGAGGTACACGAGAAGGAAGCAAACAAGCCTTTTGAAAACACCATTATTTTTGTTGCATATGATATCATGAATAAACTGAATTTTCAGGGTGTGGTTGGAGAGCTAAAGAAGAAAATTGAGGAGTTCGAAGAAAAGTATGCTGAAGTGGAAAGGGAAAGTAAAGCTAGACTCAAGGAGGCAGAAGAGGCACAATTGAAATCAATGCAACTTCGAGAGACTATTGAGAGATTGGAATCAAATTTATCTAGCCTTGAGTCTGAGAACCAGGTTCTGCGCCAGCAGGCTTTGGTTGCAGCAGACAACGAGTCCCTCTCAGAAGAACTGGAAACCCTCAAGAGTAAGATTGGAAGTCTAGAGGCAGAGAATGAAGTCCTCCGCAATCGGACAGTGGCTGTTGAACATATACCTGTTCCCGCTGCAGCCCTTGCAGAAAGCAAGACTTTAGATAATGGGCATCTAATTGAAGAAGAGATTAAATCAACTAAGGAACCATCTACTGTTCCAATTAAATCAACAAAGGAACAATCTACTGTTCCCATCCTAGCTAAACAAGGCTCGCTTACAGAAAAGCAACAGGAAAATCATGATGTCCTGATCAAGTGCTTAGCAGAAGACAAACGTTTTGACAAGGGCAGACCGGTTGCAGCTTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAAGCAGAGAGGACAAATATATTTGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGCGATCTTGCCTATTGGCTTTCAACCTCTTCCACCCTTCTCTACCTTCTTCAAAGTTCACTCAAGGCAACCAATACAAGTACTGTAGCTTCAAATCGCAACCGAGCTTCTCCTGCAACCTTATTTGGTCGTATGGCATATGGTCTTCGATCATCGTCAGTGGGCATGGGAATGTCCAGTGGATACAGTGGAATGGTGGGCAAGACAAACAATCAATCTAAAGTTGAAGCCAAGTACCCAGCACTGCTTTTTAAGCAACATCTGGCTGCATGCATTGAAAAATTGTTTGGGATGATACGTGATAATTTGAAGAAAGAAATTAGCCCTTTCTTGCATCTATGCATTCAGGCACCAAGATCAGTGAGGGCCAGATCAATAAGAGGGTCATCTAAAAATATTCATTCAAACATTGTTGCAAAACAGCAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAAGCTAGACCAGACATTGGATATAATGTTGGAAAACCATGTTCCCTCCATGATCATGAGAAAAATCTTCCTCCAAGTTTTCTCATTCATAAATGTCCAGCTTTTCAATAGCTTGTTACTACGACGTGAGTGTTGTTCCTTCAGTAATGGAGAGTACTTAAAGTTGGGTCTGCAGGAGTTGGAGCAATGGTGTAACAAAGCTACCGATACGCATGCTGGCTCTTCCTGGGATGAACTTCAACACATAAGACAAGCAGTAGGATTTCTGGTGTTACATCAGAAGTCCCAGAAAAGTTTGAATGAAATCACAGATGAATTGTGCCCGATTCTAAGCATTCCACAAATATATCGCATAGGAACGATGTTCTGGGACGACAAATATGGAACTCAGGGATTATCTCCTGATATAATTGGAAAAATGAGAGTCCTATTGGCAGAAGACTCCATAAACATCCCAAACAACTCTTTCCTGCTTGATGTGGATTCAAGCATACCATTTTCAATGGAAGAAATATGCCGGTCCTTTGGCGAGGACGGCGGGGTTAACCTGTCTGACGTCGACCCACCACCACTTATAAGACAAAGATCAGATTTCCATTTTCTAGTGCAGCAACTGACTGAATGA | 4824 | 42.06 | MGTPVNIIVGSHVWVEDPEDAWIEGQVTEIKGKNATILTTNAKTIVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGATFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKFKVGDPRTFHYLNQTNCYEVANVDDSREYLETRNAMDVVGINQDEQDAIFRVVAAILHLGNIEFMKGKEVDSSKVKDEKSNYHLQTAAELLMCDVKSLEHSLCQRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQLHKNKCAFSVQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVKYQADQFLDKNKDYVVAEHQALLNASQCFFVANLFPPLPEETSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENYNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGSDEKSACIAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRLIQRQIRTYLTRKEFIALRRATIHLQKLWRGQLARKLYEQMRREAASIRIQKHARAHADRKSYKRLLASAIVIQTGMRAMAARNEYRHRRRTKAAIIVQTEWRRASAISAYKQQQKATLALQCLWRSKVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQNAMEEMQGQLDEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLEILRNHNEELEVHEKEANKPFENTIIFVAYDIMNKLNFQGVVGELKKKIEEFEEKYAEVERESKARLKEAEEAQLKSMQLRETIERLESNLSSLESENQVLRQQALVAADNESLSEELETLKSKIGSLEAENEVLRNRTVAVEHIPVPAAALAESKTLDNGHLIEEEIKSTKEPSTVPIKSTKEQSTVPILAKQGSLTEKQQENHDVLIKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEAERTNIFDRIIHTIRSSIESQENISDLAYWLSTSSTLLYLLQSSLKATNTSTVASNRNRASPATLFGRMAYGLRSSSVGMGMSSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVRARSIRGSSKNIHSNIVAKQQASSIHWQSIVNKLDQTLDIMLENHVPSMIMRKIFLQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCNKATDTHAGSSWDELQHIRQAVGFLVLHQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDIIGKMRVLLAEDSINIPNNSFLLDVDSSIPFSMEEICRSFGEDGGVNLSDVDPPPLIRQRSDFHFLVQQLTE* | 1608 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 24405123 | 24415946 | - | Chy1G019170.1 | Chy01g01917 | 219098 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy01g01917 | 1607 | ProSiteProfiles | IQ motif profile. | 864 | 893 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | Gene3D | - | 439 | 634 | - | - | |
| Chy01g01917 | 1607 | ProSiteProfiles | Dilute domain profile. | 1231 | 1546 | IPR002710 | - | |
| Chy01g01917 | 1607 | ProSiteProfiles | Myosin motor domain profile. | 62 | 742 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Chy01g01917 | 1607 | CDD | MYSc_Myo11 | 76 | 730 | IPR036018 | - | |
| Chy01g01917 | 1607 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 36 | 796 | IPR027417 | - | |
| Chy01g01917 | 1607 | ProSiteProfiles | IQ motif profile. | 768 | 797 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Chy01g01917 | 1607 | SMART | MYSc_2a | 56 | 743 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Chy01g01917 | 1607 | PANTHER | MYOSIN-12 | 19 | 1600 | - | - | |
| Chy01g01917 | 1607 | PANTHER | MYOSIN | 19 | 1600 | - | - | |
| Chy01g01917 | 1607 | CDD | MyosinXI_CBD | 1182 | 1569 | IPR037975 | GO:0007015 | |
| Chy01g01917 | 1607 | Coils | Coil | 1025 | 1087 | - | - | |
| Chy01g01917 | 1607 | Coils | Coil | 926 | 960 | - | - | |
| Chy01g01917 | 1607 | ProSiteProfiles | IQ motif profile. | 793 | 819 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | SMART | DIL_2 | 1421 | 1528 | IPR002710 | - | |
| Chy01g01917 | 1607 | Gene3D | - | 795 | 845 | - | - | |
| Chy01g01917 | 1607 | Gene3D | - | 744 | 794 | - | - | |
| Chy01g01917 | 1607 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Chy01g01917 | 1607 | PRINTS | Myosin heavy chain signature | 429 | 457 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Chy01g01917 | 1607 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Chy01g01917 | 1607 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Chy01g01917 | 1607 | PRINTS | Myosin heavy chain signature | 493 | 521 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Chy01g01917 | 1607 | Coils | Coil | 1094 | 1121 | - | - | |
| Chy01g01917 | 1607 | ProSiteProfiles | IQ motif profile. | 745 | 772 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | Pfam | IQ calmodulin-binding motif | 748 | 765 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | Pfam | IQ calmodulin-binding motif | 795 | 814 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | Pfam | IQ calmodulin-binding motif | 769 | 788 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | Pfam | IQ calmodulin-binding motif | 866 | 885 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | Pfam | IQ calmodulin-binding motif | 818 | 837 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | Pfam | DIL domain | 1422 | 1525 | IPR002710 | - | |
| Chy01g01917 | 1607 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 796 | 893 | IPR027417 | - | |
| Chy01g01917 | 1607 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 612 | - | - | |
| Chy01g01917 | 1607 | Gene3D | - | 252 | 310 | - | - | |
| Chy01g01917 | 1607 | ProSiteProfiles | IQ motif profile. | 816 | 845 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | SMART | iq_5 | 863 | 885 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | SMART | iq_5 | 744 | 766 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | SMART | iq_5 | 815 | 837 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | SMART | iq_5 | 767 | 789 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | SMART | iq_5 | 840 | 862 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | SMART | iq_5 | 792 | 814 | IPR000048 | GO:0005515 | |
| Chy01g01917 | 1607 | Gene3D | Kinesin motor domain | 65 | 673 | IPR036961 | - | |
| Chy01g01917 | 1607 | Pfam | Myosin head (motor domain) | 64 | 730 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Chy01g01917 | 1607 | Gene3D | - | 678 | 740 | - | - | |
| Chy01g01917 | 1607 | Coils | Coil | 887 | 921 | - | - | |
| Chy01g01917 | 1607 | Pfam | Myosin N-terminal SH3-like domain | 9 | 46 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy01g01917 | Chy-Chr1:24405123 | Chy02g01252 | Chy-Chr2:9133332 | 0 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy01g01917 | K10357 | - | csv:101207221 | 2974.88 |