Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01918 ATGGCCTTTGAATCAAACCAAACTAATGAATTCATTTTCCGTTCAAAGCTTCCCGATATTCACATTCCCAATCATCTCCCACTTCACGATTATGTTTTCCAAAATCTCTCCAAATTTGCCTCACGCCCCTGTTTGATCAACGGCACCACCGGGGACGTTTACACCTACCATGACGTTCAGCTAACAGCCCGTCGAGTCGCCGCTGGCCTACACAACCTCGGTATTAAGAAGGGTGATGTTGTCATGAATTTACTTCCCAATTCTCCGGAGTTCGTCTTCACTTTCCTTGGCGCGTCTTACCGGGGCGCCATCATGACGGCGGCCAACCCTTTTTACACTGCGGTGGAAATAGCCAAACAGGCCAAAGCCGCCAATGCGAAATTAATCGTAACTATGGCTTGCTTCTACGATCGGGTTAAGGATTTGGGTGAAAATGGTGTCAAAATCGTATGTGTTGATTTTTCTGTTGAGGGTTGTTTGCATTTCTCTGTTTTGAGTGGGGCTGACGAATCTCTCATGCCGCGGGTGGATTTTTCGTCCGATGATGTGGTGGCGCTACCGTACTCCTCTGGAACTACCGGTTTGCCAAAGGGAGTTATGTTGACTCATAAAGGGTTTATCACAAGTGTGGCTCAACAAGTCGACGGCCAAAATCCGAACCTATATTATCGTGGCGATGATGTAATCCTCTGTGTACTGCCGCTTTTCCATATCTATTCACTTAATTCGATTTTGCTGTGTGGGCTACGCGCCGGTGCTGCCATTATGATTATGCAAAAGTTCGACATCGTTGCACTTTTTCAATTGATTGGGAAATACAAAATCTCGATCGTGCCCATCGTGCCGCCAATCTTCTTGGCCATTGCTAAGTCAGCTGAGTTTGAAAAATACGACGTGTCGTCCGTAAGGGTTCTAAAATCCGGCGGAGCACCACTGGGGAAGGAGTTGGTAGAGACCGTGAAGGCAAAATTTCCAGCGGCGATTCTCGCACAAGGGTACGGAATGACTGAGGCTGGTCCGGTTCTAACTATGAGTTTGGCTTTTGCAAAAGAACCATTTCAAGTGAAATCCGAAGCTTGCGGAACTGTGGTCAGAAATGCAGAGATGAAGATAGTCGACCCGGAAACCGGGGCCTCCTTGCCTGAAAATTCCGCGGGTGAGATTTGTATTAGAGGTGATCAAATCATGAAGGGATATTTGAATGATTTGGAGTCAACCAAGAGGACTATTGACAAAGAAGGATGGCTTCACACCGGCGACATCGGCTTCATCGATGACAACAATGAGCTCTTCATTATAGACCGGCTTAAGGAGCTTATCAAGTTCAAGACATTTCAAGTGGCACCCGCCGAACTGGAAGCACTTCTTATCACTCACCCAAAACTACGTGACGCTGCTGTTATTGGTATGCCGGACGTGGAGGCGGGAGAAGTACCGGTGGCGTTTGTGGTGGAGGAGAAGAGTAGTGCAAGCGCAACAACAGAAGAAGAAGTAAAAGAATTCATAGCAAAGCAAGTGGTTTTCTACAAAAGGCTAAAGCGTGTATTTTTTGTCAACGCTATTCCAAAGGCACCATCTGGCAAAATCCTCAGGAAAGAAATAAGGGCAAAATTGGCATCCGGCGCTTACAATTAA 1635 46.79 MAFESNQTNEFIFRSKLPDIHIPNHLPLHDYVFQNLSKFASRPCLINGTTGDVYTYHDVQLTARRVAAGLHNLGIKKGDVVMNLLPNSPEFVFTFLGASYRGAIMTAANPFYTAVEIAKQAKAANAKLIVTMACFYDRVKDLGENGVKIVCVDFSVEGCLHFSVLSGADESLMPRVDFSSDDVVALPYSSGTTGLPKGVMLTHKGFITSVAQQVDGQNPNLYYRGDDVILCVLPLFHIYSLNSILLCGLRAGAAIMIMQKFDIVALFQLIGKYKISIVPIVPPIFLAIAKSAEFEKYDVSSVRVLKSGGAPLGKELVETVKAKFPAAILAQGYGMTEAGPVLTMSLAFAKEPFQVKSEACGTVVRNAEMKIVDPETGASLPENSAGEICIRGDQIMKGYLNDLESTKRTIDKEGWLHTGDIGFIDDNNELFIIDRLKELIKFKTFQVAPAELEALLITHPKLRDAAVIGMPDVEAGEVPVAFVVEEKSSASATTEEEVKEFIAKQVVFYKRLKRVFFVNAIPKAPSGKILRKEIRAKLASGAYN* 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24424172 24425891 - Chy1G019180.1 Chy01g01918 219099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01918 544 Gene3D - 3 436 IPR042099 -
Chy01g01918 544 CDD 4CL 22 533 - -
Chy01g01918 544 Gene3D - 437 540 IPR045851 -
Chy01g01918 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 539 - -
Chy01g01918 544 Pfam AMP-binding enzyme C-terminal domain 451 528 IPR025110 -
Chy01g01918 544 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Chy01g01918 544 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 539 - -
Chy01g01918 544 SUPERFAMILY Acetyl-CoA synthetase-like 10 540 - -
Chy01g01918 544 Pfam AMP-binding enzyme 35 442 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01918 Chy-Chr1:24424172 Chy01g01920 Chy-Chr1:24441070 0 dispersed
Chy01g01918 Chy-Chr1:24424172 Chy01g01919 Chy-Chr1:24431937 0 tandem
Chy02g00087 Chy-Chr2:558202 Chy01g01918 Chy-Chr1:24424172 6.54E-32 transposed
Chy05g00626 Chy-Chr5:7680862 Chy01g01918 Chy-Chr1:24424172 1.95E-14 transposed
Chy01g01918 Chy-Chr1:24424172 Chy04g01325 Chy-Chr4:19794468 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01918 K01904 - csv:101218595 1038.1