Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01919 ATGGCCTTTGAATCAAACGAAACTAATGAATTCATTTTCCGTTCAAAGCTTCCCGATATTCACATTCCCAATCATCTTCCACTCCACGACTATGTTTTCCAAAATCTCTCCAAATTCGCCTCACGCCCCTGTTTGATCAACGGCGCCACCGGGGATGTTTACACCTACCATGACGTTCAGCTAACAGCCCGTCGAGTCGCCGCTGGCCTACACAACCTCGGTATTAAGAAGGGTGATGTTGTCATGAATTTACTTCCCAATTCCCCGGAGTTTGTCTTCACCTTCCTTGGCGCGTCTTACCGGGGCGCCATCATGACAGCAGCCAATCCTTTTTACACGGCTGTGGAAATAGCTAAACAGGTGAAAGCGGCTAATGCGAAATTAATCGTGACAATGGCTTGTTTTTATGATCGCGTTAAGGATTTGGGTGAAAATGGTGTCAAAATCGTGTGTGTTGATTTTGCTGTGGAGGGTTGTTTGCATTTCTCTGTTTTGAGTGGGGCTGATGAATCTCTTGCGCCGCCGGTGGATTTTTCCTCTGATGACGTGGTGGCATTACCGTACTCCTCTGGCACTACCGGTTTGCCGAAAGGAGTTATGCTGACACATAAAGGGTTAATCACAAGTGTGGCGCAACAAATGGATGGCCAAAATCCAAATCTCTATTATCACAGAAACGATGTTATCCTCTGTGTGCTGCCGTTTTTCCATATCTATTCACTCAATTCGATTTTGCTGTGTGGACTACGAGTCGGCGCTGCCATTATGATTATGCAAAAATTTGACATCGTTTCACTTTTACAATTGATTGAGAAACATAGAATCTCGATCATGCCCATCGTGCCTCCAATCTTTTTGTCCATCGCTAAGTCCCCAGAATTTGAAAAGTACGACGTGTCGTCCGTGAGGGTTCTAAAATCTGGTGGAGCTCCACTAGGGAAGGAGTTGGAAGATGCCGTGAGGGAGAAATTTCCAACGGCGATTCTCGGACAAGGGTATGGAATGACCGAGGCCGGTCCAGTTCTATCCATGAGCTTAGCTTTTGCAAAAGAACCGTTTCAAGTAAAAGCCGGAGCCTGCGGAACTGTGGTCCGCAATGCAGAGATGAAGATTGTTGACACCGAAACCGGGGCCTCATTGCCGGCGAATTCCTCCGGAGAAATTTGTATTAGAGGTGATCAAATCATGAAAGGATATTTGAATGATTTGGAGTCAACAAAGAGGACTATTGATAAAGAAGGATGGCTTCACACCGGCGACATTGGCTTTGTCGACGACGACAACGAGCTCTTCATCGTTGATCGGCTTAAGGAACTAATAAAATTCAAGGCATTTCAAGTGGCTCCTGCTGAGCTCGAGGCCCTTCTTATCACACATCCTAAACTATCTGATGCTGCCGTCATTGGTATGCCGGATGTGGAGGCGGGAGAAGTGCCGGTGGCGTTTGTGATGAAGGCGAACGGCGGTGCAATAACAGAGGAAGAAGTAAAGCAATTCATAGCAAAACAAGTTGTTTTCTACAAAAGACTAAAACGTGTGTTTTTCGTTAATGCTATTCCAAAGGCTCCGTCAGGCAAAATCCTTAGAAAGGAACTCAGAGCAAAACTTGCTTCGGGTGCTTACAATTAG 1629 45.98 MAFESNETNEFIFRSKLPDIHIPNHLPLHDYVFQNLSKFASRPCLINGATGDVYTYHDVQLTARRVAAGLHNLGIKKGDVVMNLLPNSPEFVFTFLGASYRGAIMTAANPFYTAVEIAKQVKAANAKLIVTMACFYDRVKDLGENGVKIVCVDFAVEGCLHFSVLSGADESLAPPVDFSSDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQMDGQNPNLYYHRNDVILCVLPFFHIYSLNSILLCGLRVGAAIMIMQKFDIVSLLQLIEKHRISIMPIVPPIFLSIAKSPEFEKYDVSSVRVLKSGGAPLGKELEDAVREKFPTAILGQGYGMTEAGPVLSMSLAFAKEPFQVKAGACGTVVRNAEMKIVDTETGASLPANSSGEICIRGDQIMKGYLNDLESTKRTIDKEGWLHTGDIGFVDDDNELFIVDRLKELIKFKAFQVAPAELEALLITHPKLSDAAVIGMPDVEAGEVPVAFVMKANGGAITEEEVKQFIAKQVVFYKRLKRVFFVNAIPKAPSGKILRKELRAKLASGAYN* 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24431937 24433662 - Chy1G019190.1 Chy01g01919 219100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01919 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 537 - -
Chy01g01919 542 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 537 - -
Chy01g01919 542 Gene3D - 437 538 IPR045851 -
Chy01g01919 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Chy01g01919 542 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Chy01g01919 542 SUPERFAMILY Acetyl-CoA synthetase-like 10 538 - -
Chy01g01919 542 Pfam AMP-binding enzyme 35 442 IPR000873 -
Chy01g01919 542 Gene3D - 5 436 IPR042099 -
Chy01g01919 542 CDD 4CL 22 532 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01919 Chy-Chr1:24431937 Chy04g01325 Chy-Chr4:19794468 0 dispersed
Chy01g01918 Chy-Chr1:24424172 Chy01g01919 Chy-Chr1:24431937 0 tandem
Chy01g01919 Chy-Chr1:24431937 Chy01g01920 Chy-Chr1:24441070 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01919 K01904 - csv:101218361 1056.59