Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01938 ATGATTATCACCATCAAGGATTCGACTATGGTGACTCCGGCGGAGGAGACGCCGCATCGGAGTCTCTGGAATTCCAACGTCGACCTCGTGGTTCCGAGCATGCATACACCGAGCGTCTACTTCTACCGACCTACCGGCGCCTCTAATTTCTTTGACGCCGAAGTTCTCAAGGAAGGTCTAAGCAAGGCGCTGGTTCCGTTTTATCCAATGGCTGGACGGTTGAGACGCGATGAAGACGGTCGAATCGAGATCTATTGTAATGCCGAAGGTGTGCTTCTTGTTGAGGCTGAGACCACGGCAGTTATTGACGATTTTGGTGATTTTGCGCCGACGTTGCAGCTTCGGCAGCTTATTCCAGCCGTGGATTACTCCGGTGGAATTGAGTCGTATCCTTTGCTGGTGTTGCAGGTGACATACTTCAAGTGTGGGGGCGTTTCCCTCGGCGTTGGAATGCAACACCATGTAGCTGATGGATACTCCGGTCTCCACTTCGTCAACACGTGGTCCGACATGTCACGTGGCCTCGACCTCATGCTACAACCTTACATCGACCGGACCCTCCTCCGCGCACGCGACCCACCTCAACCAGCCTTTCGACATGTCGAATACCAACCAGCACCACCCATGAAAAACCCAGTCCAAGCCGACCCGGAAGGAACCACCGTCTCCATTTTCAAATTCACCCGGGAACAGCTTAGTTTACTCAAAGCCAAGTCCAAAGAAAACGGCAACACCATCAACTACAGCTCCTACGAGATGCTCTCCGGCCACGTATGGCGCTGCACGTGCAAGGCGCGTGAACTCCCGGAAGATCAAGATACTAAGCTTTACATCGCCACTGACGGCCGTGCCCGGTTGCGCCCGCCGCTACCCAACGGCTACTTCGGCAATGTCATCTTCACAACGACGCCGCTCGCCGTCGCCGGGGAACTAATGTCGAATCCCACGTGGTTCGCTGCCAGCAAGATCCACGACGCCTTGACTCGGATGGACAACAATTATTTGAGATCGGCTTTGGATTATCTCGAGATTCAGCCGAATATATCGGCGTTGGTCCGTGGTGCTCATACGTTCCGATGCCCTAACTTGGGAATCACAAGCTGGGTCCGGCTGCCTATTCACGACGCCGACTTCGGGTGGGGCCGGCCTATTTTTATGGGCCCCGGCGGAATCGCATACGAGGGATTGTCGTTTATAATCCCGAGTGCTTCCGACGATGGCAGTTTGTCGGTGGCGATTTCACTGCAGAATCGACATATGAAGGTGTTTGAGAAACTGTTCTTTGATATTTGA 1293 53.83 MIITIKDSTMVTPAEETPHRSLWNSNVDLVVPSMHTPSVYFYRPTGASNFFDAEVLKEGLSKALVPFYPMAGRLRRDEDGRIEIYCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQVTYFKCGGVSLGVGMQHHVADGYSGLHFVNTWSDMSRGLDLMLQPYIDRTLLRARDPPQPAFRHVEYQPAPPMKNPVQADPEGTTVSIFKFTREQLSLLKAKSKENGNTINYSSYEMLSGHVWRCTCKARELPEDQDTKLYIATDGRARLRPPLPNGYFGNVIFTTTPLAVAGELMSNPTWFAASKIHDALTRMDNNYLRSALDYLEIQPNISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQNRHMKVFEKLFFDI* 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24613331 24616642 - Chy1G019380.1 Chy01g01938 219119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01938 430 Gene3D - 1 205 IPR023213 -
Chy01g01938 430 Pfam Transferase family 2 425 - -
Chy01g01938 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 429 - -
Chy01g01938 430 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 429 - -
Chy01g01938 430 Gene3D - 209 430 IPR023213 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01938 Chy-Chr1:24613331 Chy08g00498 Chy-Chr8:12117715 1.43E-101 dispersed
Chy05g01187 Chy-Chr5:16362730 Chy01g01938 Chy-Chr1:24613331 3.45E-13 dispersed
Chy07g01107 Chy-Chr7:16027256 Chy01g01938 Chy-Chr1:24613331 6.40E-29 dispersed
Chy08g00653 Chy-Chr8:14432548 Chy01g01938 Chy-Chr1:24613331 1.95E-34 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01938 K13065 - csv:101214857 870.537