Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g01939 | ATGGTTTTCGAACATGACAAAGATGGTTTTGGAGACTGGTATGGTTTTCGAGTTTTTGATGATCCAAATGGTGAAGACAAACAATCTTACATAGAGGGGAAAACTCAACTGAAGGTTGAAAGTGAAGCTTGGAAAATGGGGATATATCTCAGCTCCCCCAAAACAGAAAAGGCCTCAGATGATGGTGAGAATGACAGACTTCGATACGGCCTATCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGATTTGGACACATCAACATCTTTCTTCGGTGTTTACGACGGCCATGGAGGTAAAGCAGTTTCAAAGTTCTGTGCCAAGTATCTTCACCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATCTGGGAACTTCTCTGCAGAAGGCCTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTAGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGGGCAATGAAGCTAACAACCAAGTGGATGATTGGCCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGTACAGCTTGTGTTGTGATCATACGAAATAACCAACTTGTGGTGGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGTCAGGCATATAATCTATCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGAATTCTGAAAGCTGGTGGTTTCATCCGAGTTGGTCGAGTCAATGGCAGTCTCAACTTGGCACGGGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCCGCAGAAAAGCAGATTGTAACTGCCAATCCAGATATAACAACTGTTGAGCTTTGTGAGGACGACGAATTTCTTGTTCTTGCCTGTGATGGGATCTGGGATTGCATGTCCAGCCAACAACTGGTTGACTACATTGGAGATCAACTAAAATCGGAAAGCAGACTCTCAGTTATTTGTGAGAGAGTATTTGACAGGTGTTTGGCACCCACAGCTGGTGGTGAAGGATGTGACAACATGACTATGATCTTGGTTCAGTTCAAGAAACCCTTCAGCAACCCGGTAAACCTGAATGCTGCTTCTACTTCTGCTGAGGAGCCACCTTCATCGTTCAATCGAACATTGTCTGATCCGAGTGAAAGTGCTTCTAAGACTGAATAG | 1239 | 44.55 | MVFEHDKDGFGDWYGFRVFDDPNGEDKQSYIEGKTQLKVESEAWKMGIYLSSPKTEKASDDGENDRLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHGGKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKAFLRMDEMMRGQRGWRELAILGDKMDKISGMIEGFIWSPKGNEANNQVDDWPPEEGPHSDFHGPNAGSTACVVIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDITTVELCEDDEFLVLACDGIWDCMSSQQLVDYIGDQLKSESRLSVICERVFDRCLAPTAGGEGCDNMTMILVQFKKPFSNPVNLNAASTSAEEPPSSFNRTLSDPSESASKTE* | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 24635573 | 24641868 | + | Chy1G019390.1 | Chy01g01939 | 219120 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g01939 | 412 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 43 | 386 | - | - | |
Chy01g01939 | 412 | SMART | PP2C_SIG_2 | 73 | 373 | IPR001932 | - | |
Chy01g01939 | 412 | PANTHER | PROTEIN PHOSPHATASE 2C | 43 | 386 | IPR015655 | GO:0004722|GO:0006470 | |
Chy01g01939 | 412 | Pfam | Protein phosphatase 2C | 202 | 358 | IPR001932 | - | |
Chy01g01939 | 412 | Pfam | Protein phosphatase 2C | 68 | 149 | IPR001932 | - | |
Chy01g01939 | 412 | Gene3D | - | 45 | 374 | IPR036457 | - | |
Chy01g01939 | 412 | MobiDBLite | consensus disorder prediction | 384 | 412 | - | - | |
Chy01g01939 | 412 | ProSiteProfiles | PPM-type phosphatase domain profile. | 68 | 373 | IPR001932 | - | |
Chy01g01939 | 412 | SUPERFAMILY | PP2C-like | 48 | 374 | IPR036457 | - | |
Chy01g01939 | 412 | SMART | PP2C_4 | 58 | 371 | IPR001932 | - | |
Chy01g01939 | 412 | ProSitePatterns | PPM-type phosphatase domain signature. | 97 | 105 | IPR000222 | GO:0043169 | |
Chy01g01939 | 412 | CDD | PP2Cc | 68 | 373 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01939 | Chy-Chr1:24635573 | Chy05g01245 | Chy-Chr5:16855973 | 1.03E-36 | dispersed | |
Chy06g01185 | Chy-Chr6:10603003 | Chy01g01939 | Chy-Chr1:24635573 | 3.34E-28 | transposed | |
Chy01g01939 | Chy-Chr1:24635573 | Chy07g00319 | Chy-Chr7:2609705 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g01939 | K17499 | - | csv:101214132 | 739.569 |