Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01953 ATGGGAGAGAAATTAGGAGTTTGTGCCATGAATCTTCTTCCCATGTGGGTTTTCTATTCCTTGTTCTCAATAATTGATGCCAGACCACACCTTCCTGGTTTCTCAATTTCTTCCACTGTTTTTGCTTCTCACTCACAACCCATCTCTCTCATTGTAGCCAAAATGGAAGCTCAATCCCCAGGAGTTTCTGAGGTTAAAGTAGTTCACCATCAAGATTTGAACAAGAGAATTCTTATTGCATTGATTATTTCTTCCACTCTTCTTGGAGCTATACTGCTGTTTCTTTTGTGTTTTTGGATATATCGTCGAAAAAAGTCGAACAATGATGATGGAAAGTGTCAAAAGAATTTGGAGGCTTCGAAAGGGACGGCATTAAATCCCATAATATCTAGATTTAACTCTTTGAGGTTGGCTAACTTTAAAGGTTCGGTTTCCACTATCGACTATAAATTGTTGGAAGCAGCAACTGATAACTTCGGCAAAAGCAATGTTTTGGGTGAAGGCGGTTCGGGACATGTTTACAAAGCTTGCTTCAATGATAAATTGCTGGCAGCTGTGAAGAGAATACACAATGGAGGACTGGACGCTGAAAGAGAATTCGAGAATGAGGTGAATTGGTTGAGTAAAATACGACATCAAAATGTGATCAAACTCTTGGGGCACTGCATTCATGGCGAGACACGGTTTCTCGTTTATGAGATGATGCAGAATGGATCTTTGGAGTCTCAATTGCACGGACCGTCTCACGGATCAGCTTTAACATGGCATATTCGGATGAAGATTGCTGTTGATGTTGCGAGAGGCTTGGAATATCTTCACGAGCATCGGAATCCTCCTGTTGTCCATCGGGATTTGAAGTCGTCGAATATTCTTCTAGATTCAGACTTTAATGCCAAGCTCTCTGACTTTGGCCTTACTGTAAACTTGGGAGCTCAAAATAAAAACATAAAGCTCTCGGGAACTTTAGGTTACGTCGCCCCAGAATACCTTTTAGACGGTAAACTAACAGATAAAAGTGATGTTTATGCGTTCGGAGTTGTTCTTTTGGAGCTTTTGACTGGGAAAATGCCCGTCGAGAAGATGGGACCTACTCAATCTCAATCTCTAGTTTCATGGGCAATCCCACAGCTCAGTGACAGATCAAAGCTACCGAAAATTGTCGATCCCGTGATAAGGGACACAATGGATTTGAAGCACTTATACCAAGTGGCTGCTGTAGCTGTTCTATGTGTACAATCAGAACCAAGCTATCGACCATTAGTTACCGACGTTTTACATTCCCTCATCCCTCTCGTACCCGTAGAGCTCGGAGGATCTCTAAGAATGACAGAGCCTCTGCATCCAAAAGTGCCTCCATCAACCAGCTAA 1368 42.25 MGEKLGVCAMNLLPMWVFYSLFSIIDARPHLPGFSISSTVFASHSQPISLIVAKMEAQSPGVSEVKVVHHQDLNKRILIALIISSTLLGAILLFLLCFWIYRRKKSNNDDGKCQKNLEASKGTALNPIISRFNSLRLANFKGSVSTIDYKLLEAATDNFGKSNVLGEGGSGHVYKACFNDKLLAAVKRIHNGGLDAEREFENEVNWLSKIRHQNVIKLLGHCIHGETRFLVYEMMQNGSLESQLHGPSHGSALTWHIRMKIAVDVARGLEYLHEHRNPPVVHRDLKSSNILLDSDFNAKLSDFGLTVNLGAQNKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLTGKMPVEKMGPTQSQSLVSWAIPQLSDRSKLPKIVDPVIRDTMDLKHLYQVAAVAVLCVQSEPSYRPLVTDVLHSLIPLVPVELGGSLRMTEPLHPKVPPSTS* 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24733095 24735733 - Chy1G019530.1 Chy01g01953 219134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01953 455 PANTHER BNAC02G46490D PROTEIN 10 447 - -
Chy01g01953 455 Gene3D Phosphorylase Kinase; domain 1 122 234 - -
Chy01g01953 455 Pfam Protein kinase domain 161 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01953 455 ProSiteProfiles Protein kinase domain profile. 159 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01953 455 PANTHER OS01G0750732 PROTEIN 10 447 - -
Chy01g01953 455 SMART serkin_6 159 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01953 455 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Chy01g01953 455 CDD STKc_IRAK 165 431 - -
Chy01g01953 455 SUPERFAMILY Protein kinase-like (PK-like) 136 428 IPR011009 -
Chy01g01953 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Chy01g01953 455 Gene3D Transferase(Phosphotransferase) domain 1 235 433 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01953 Chy-Chr1:24733095 Chy08g00997 Chy-Chr8:17220308 6.71E-94 dispersed
Chy01g01953 Chy-Chr1:24733095 Chy03g01097 Chy-Chr3:14355904 5.98E-173 wgd
Chy01g01953 Chy-Chr1:24733095 Chy07g00350 Chy-Chr7:2851269 1.23E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71008 PF00069 Pkinase 3.50E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01953 - - csv:101211571 876.7