Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02019 ATGGCAATTAGCAATGAAATCATGTTTGATTGCTTTGTTCTGCTTTTGCTTGTGGCGTTTTCAAACGCCCAATCCGACGTATTGGCACAAGGCCAAGAAATAACACCTGGGTCTACGCTAATTTCGACCATGGCCAATTTTTCGCTCGGCTTTTACAGTCCTAGCTTATTGAACAACAGTTATATAGCGATTTGGTACCACAGTGATTCACAGAACCCAGTGTGGATTGCCAATCTTGAAGAACCCACCAACAGCAGTGCTATTCTTCTAGACAATGGCAACTTTGTATTGTGTGTGTTGAATCTAGATGGATCAATTAAGCGACAACTATGGCAGAGCTTTGATCATCCAACAGACACTCTCCTTCCTGGGATGAAACTTGGGATCAACCACAAAACTGGATCCATTTGGTCTATAACATCCCGAAGAGGTGACTATTCCGTTCTATCGGGTTCCTTCACTCTCACAGTGAATCCCAACAATACAAACCAGTTGCTGATATTACATAGAGGAAGCGTTTACTGGACCAGTGGAAACTGGAAGGACGGGCGATTCGAGTTCTCTGAAGAACTTTCCAACATCAACAATCAAGAATTCGTGTTCAGTCGATTTTCAAATGAGAACGAGACATTTTTCAATTACTCCATCTCCGATCTCTTTAAATTGCCTAACCATAACAAGGGATGGATAGAAGTTCAAACCTTCTTGAGATTGGGCAACGATGGGAAATTGGTGGGGCGTAATTGGGACTCAAAAGTTGAATGTCCCTATTTTGAAAACGAGTTGTTTGAGCCTAAGAATGTTTCTGTAGTTGGGTGTGTGGGGAAAATGCAGCACAAAGTACCCGAGTGCCGAAATCCACCAAAACAGTATTCCACTTCACAGAGATTTGGAAACATGGAGAGAAATGGTTTGAGGTTCAGAGAAAGTGAGAACCTGACCATTTACGATTGTGAAAAGAATTGCATTTCAAGCTGTGATTGCATTGCCTTTAGTTCTACAAACGAAGAAGGCACTGGCTGTGAGATGTGGAATGTGGGAGCAACGTTTATTCCAGTGGAGGGAGGCAAACGGATAATTTGGTCTCTTGAGATAGTCGAAGGAAAAGTTCTTGCAGGAGAAAAAAGGGTGTGGTTGCAAGTTACTATAGGTCTAATAGTACCTGTAACTTCTCTCCTATTGTGTTTTCTTGTCTATCTCAAATGGAAAACACAAATACTCAAAGCTATTAGAAAAATAAGGAGGGATTCTGAACATCAAAATTTTCTGCAAGAATTGGGAGCCAAATCTAAGAGTTTTGACATTCCAACTATTATGAACAAGCAAAGAAGAGACGTAAGGAACTCTGAATTGCAGTTTTTCAGTTTTAGAAGTGTAGTTTCTACAACAAACAATTTTGCTGACAATTGTAAGCTTGGAGAGGGTGGGTTTGGACCAGTTTATAAGGGAACTTTGGCCGATGGCCACGAAGTTGCCATTAAAAGGCTATCAAAGAAATCTGGACAAGGGATTGAAGAGTTCAAGAATGAAGTCATCCTGATTGCCAAACTGCAACACACTAATCTGGTTAGGCTTATCGGTTGTTGCATTCATAAAGAAGAGAGGTTATTGGTGTATGAGTACATGCCCAACAAAAGCCTTGACTCCTTCCTCTTTGATCCAGTTAGAAAGCTAACTCTCCCTTGGGACAAACGGCAACACATAATCCAAGGGATAATTCAAGGACTACTTTACCTTCACAACTATTCAAGACTAAGAATAGTTCATCGAGATTTAAAAGTTAGCAACATCTTGCTCGATGCTAAGATGAATGCAAAAATATCAGATTTTGGCATGGCCAGAATCTTTGATCTCACAAAGGAAGAAGCAAATACTAATCACATTGTTGGTACATATGGATATATATCACCTGAAAATGTGATGGGAGGTGTTTTCTCACTAAAATCAGATGTTTACAGCTTTGGGGTGTTGTTATTAGAGATCATAACAGCTCGAAAAAACTACGACAGTTACGATGCGGAACGACCAATGAATCTCATTGGATATGCATGGGAATTGTGGGTGAACGGCAGAGGAGAAGAATTGATTGATTCAACTTTGTGCAACTCTGATCAGAAACCAAAGGCTCTAAGATGCATCCATGTTGGCCTTCTTTGCGTACAACAAATGCCAGAATATAGACCTACCATGCTTGATGTTTATTCCATGATTCAGAATGATTCTACTCAACTTCCATTGCCAAAACAACCTCCGTTTTTCATCACCCATAACTCCAAACTGGAAGTGGTGACAGATAAATCGGAATCAGCAACACAAATATATTCTTCCAATGATATGTCAGTCTCTGTGATGGTTGCGAGATGA 2364 40.4 MAISNEIMFDCFVLLLLVAFSNAQSDVLAQGQEITPGSTLISTMANFSLGFYSPSLLNNSYIAIWYHSDSQNPVWIANLEEPTNSSAILLDNGNFVLCVLNLDGSIKRQLWQSFDHPTDTLLPGMKLGINHKTGSIWSITSRRGDYSVLSGSFTLTVNPNNTNQLLILHRGSVYWTSGNWKDGRFEFSEELSNINNQEFVFSRFSNENETFFNYSISDLFKLPNHNKGWIEVQTFLRLGNDGKLVGRNWDSKVECPYFENELFEPKNVSVVGCVGKMQHKVPECRNPPKQYSTSQRFGNMERNGLRFRESENLTIYDCEKNCISSCDCIAFSSTNEEGTGCEMWNVGATFIPVEGGKRIIWSLEIVEGKVLAGEKRVWLQVTIGLIVPVTSLLLCFLVYLKWKTQILKAIRKIRRDSEHQNFLQELGAKSKSFDIPTIMNKQRRDVRNSELQFFSFRSVVSTTNNFADNCKLGEGGFGPVYKGTLADGHEVAIKRLSKKSGQGIEEFKNEVILIAKLQHTNLVRLIGCCIHKEERLLVYEYMPNKSLDSFLFDPVRKLTLPWDKRQHIIQGIIQGLLYLHNYSRLRIVHRDLKVSNILLDAKMNAKISDFGMARIFDLTKEEANTNHIVGTYGYISPENVMGGVFSLKSDVYSFGVLLLEIITARKNYDSYDAERPMNLIGYAWELWVNGRGEELIDSTLCNSDQKPKALRCIHVGLLCVQQMPEYRPTMLDVYSMIQNDSTQLPLPKQPPFFITHNSKLEVVTDKSESATQIYSSNDMSVSVMVAR* 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25086402 25089716 + Chy1G020190.1 Chy01g02019 219200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02019 787 Gene3D - 18 179 IPR036426 -
Chy01g02019 787 ProSiteProfiles Protein kinase domain profile. 466 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02019 787 SMART blect_4 25 117 IPR001480 -
Chy01g02019 787 Pfam Protein kinase domain 469 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02019 787 Pfam PAN-like domain 311 345 IPR003609 -
Chy01g02019 787 ProSiteProfiles Bulb-type lectin domain profile. 25 161 IPR001480 -
Chy01g02019 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 51 758 - -
Chy01g02019 787 SUPERFAMILY Protein kinase-like (PK-like) 450 764 IPR011009 -
Chy01g02019 787 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 51 758 - -
Chy01g02019 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 141 IPR036426 -
Chy01g02019 787 PIRSF SRK 1 88 IPR024171 GO:0004674
Chy01g02019 787 PIRSF SRK 83 787 IPR024171 GO:0004674
Chy01g02019 787 Gene3D Transferase(Phosphotransferase) domain 1 542 745 - -
Chy01g02019 787 SMART serkin_6 466 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02019 787 Gene3D Phosphorylase Kinase; domain 1 439 541 - -
Chy01g02019 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Chy01g02019 787 Pfam D-mannose binding lectin 68 143 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02019 Chy-Chr1:25086402 Chy04g00613 Chy-Chr4:6919317 5.53E-147 dispersed
Chy01g02066 Chy-Chr1:25482204 Chy01g02019 Chy-Chr1:25086402 2.09E-75 dispersed
Chy01g02019 Chy-Chr1:25086402 Chy04g00612 Chy-Chr4:6894298 1.68E-152 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71009 PF00069 Pkinase 1.10E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02019 - - csv:101221041 1524.99