Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02056 ATGGGAATCAATTCCAACCGAGTTGAAAATTTGGAATGTCGTGAAACGGTGTTGACGATGCCGGCTGACGCAATGCCGGAGCCGTCTCGACCCGAGGTTGAGATTCATAAAGTTTGTTTACCTCCCGAGCAAACTACGTTTCAGAAACTTAAGCATAAGCTATCCGAGGTGTTCTTTCCTGATGACCCGTTTCATAGATTCAAGAACCAAACGACGCTTAGGAAATTGCTTTTAGGCCTTCAATTTCTCTTCCCTGTTTTTCAGTGGGGCCCTGATTATACCCTCGCTCTTTTCAAGTCTGATGTCGTTTCTGGTCTTACAATTGCTAGCCTTGCTATTCCTCAGGGAATAAGCTATGCGAAACTAGCAAATTTGCCTCCAATCATCGGATTATATTCAAGTTTTGTGCCTCCGCTTATATATTCTATCCTTGGGAGCTCTAGGCATCTTGCTGTTGGGCCAGTATCAATTGCCTCTTTGGTCATGGGATCGATGATTACTGAGGCGGTCTCTTATAATGAACACCCAACTCTGTATCTTAAGTTGGCTTTTACTGCTACCTTCTTTGCTGGTGTATTCCAAGCATCTTTAGGCTTGTTAAGGTTGGGCTTTGTAATTGATTTTCTGTCAAAGGCTACTTTAGTTGGCTTTATGGCTGGTGCAGCAGTTATTGTGTCATTGCAACAACTCAAAGGGTTGCTTGGAATTGCCCATTTCACCACCAAAATGCAATTTATTCCTGTCATGTCTTCTGTTTTTCATCGCGAAGATGAGTGGTCCTGGCAAACTATTGTTTTAGGCTTCATTTTCCTACTGTTTCTTCTGGGAACAAGGCATATAAGCATCAAGAAACCAAAGCTTTTCTGGATTTCAGCAGCAGCTCCACTGACATCAGTTATTTTGTCCACAATTTTGGTCTTCTTGCTGAAAACAAAATTTCCTGGAATCTCAGTGATTGGTCATTTGCCCAAGGGTGTCAATCCTCCATCTCTCAACATGCTGTACTTTACTGGTCCTCAGTTGGCACTTGCCATTAAAACTGGCATTATAACTGGAATTCTCTCACTCACCGAAGGAATTGCCGTAGGAAGGACGTTTGCTGGTTTGAAAAACTATCAAGTGGATGGGAATAAGGAAATGATGGCTATTGGTTTTATGAACATGGCTGGATCTTGTTCTTCATGCTATGTCACTACAGGATCATTTTCTCGGTCTGCTGTGAACTACAATGCCGGGGCACAAACAGCAGTTTCAAACGTTGTGATGTCTGCAGCTGTGCTCATAACATTGTTGTTTCTGATGCCATTGTTCCATTATACTCCAAATTTCATCCTAGCAGCCATCATTATAACAGCAGTAATTGGGTTAATTGATTACCAAGCAGCCTGTAAGTTGTGGAAAGTTGACAAGCTCGATTTTTTGGCTTGTGTTTGTTCTTTCTTTGGCGTTCTTTTCATCTCCGTTCCATTGGGCCTTGCCATCGCAGTTGGAGTCTCTGTTTTCAAGATTCTTCTGCATGTCACCAGGCCAAACACCATGGTTTTGGGGAATATTTCTGGGACTCATATATTCCAAAACCTTGACCGATACCGGGATGCATCAAGGGTGCCTTCGTTTCTCATTCTTGCCATTGATTCTCCAATCTACTTCGCAAATTCAACGTACTTACTAGAAAGAATTCTTAGGTGGGTTAGGGAAGAAGAAGAGCGGATAAAATCGACTGAAGATAGTCCACTGAAATGTGTAATCCTAGACATGACAGCTGTAACATCCATAGATACAAGTGGTATAGAAACAGTGTGTGAGCTTAAAAAGATATTGATGCAAAAATCATTGCAGTTCGTGCTAGCAAATCCTGGTGGAAACGTGATGGAAAAACTATATAATTCAAAGGCATTGGAGCAGTTCGAGTTCAACGGTCTCTACCTCTCAGTTGGAGAAGCTGTAAAGGACATTTCTTCTTTATGGAAGAGGCCGCTGTCATAA 1986 42.15 MGINSNRVENLECRETVLTMPADAMPEPSRPEVEIHKVCLPPEQTTFQKLKHKLSEVFFPDDPFHRFKNQTTLRKLLLGLQFLFPVFQWGPDYTLALFKSDVVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGSMITEAVSYNEHPTLYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIAHFTTKMQFIPVMSSVFHREDEWSWQTIVLGFIFLLFLLGTRHISIKKPKLFWISAAAPLTSVILSTILVFLLKTKFPGISVIGHLPKGVNPPSLNMLYFTGPQLALAIKTGIITGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNVVMSAAVLITLLFLMPLFHYTPNFILAAIIITAVIGLIDYQAACKLWKVDKLDFLACVCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTMVLGNISGTHIFQNLDRYRDASRVPSFLILAIDSPIYFANSTYLLERILRWVREEEERIKSTEDSPLKCVILDMTAVTSIDTSGIETVCELKKILMQKSLQFVLANPGGNVMEKLYNSKALEQFEFNGLYLSVGEAVKDISSLWKRPLS* 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25423469 25427217 + Chy1G020560.1 Chy01g02056 219237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02056 661 Pfam STAS domain 530 648 IPR002645 -
Chy01g02056 661 Gene3D STAS domain 509 653 IPR036513 -
Chy01g02056 661 ProSiteProfiles STAS domain profile. 529 652 IPR002645 -
Chy01g02056 661 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Chy01g02056 661 PANTHER SULFATE TRANSPORTER 3.4-RELATED 28 657 IPR030317 -
Chy01g02056 661 TIGRFAM sulP: sulfate permease 85 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy01g02056 661 SUPERFAMILY SpoIIaa-like 534 650 IPR036513 -
Chy01g02056 661 Pfam Sulfate permease family 98 477 IPR011547 GO:0016021
Chy01g02056 661 PANTHER SULFATE TRANSPORTER 28 657 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy01g02056 661 CDD STAS_SulP_like_sulfate_transporter 530 645 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02056 Chy-Chr1:25423469 Chy09g00551 Chy-Chr9:5849473 0 dispersed
Chy01g02056 Chy-Chr1:25423469 Chy01g01556 Chy-Chr1:21486310 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02056 K17471 - csv:101203079 1256.12