Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02121 ATGGATTGGATGTGGCGGGAGCTGATATCTTTCATCATTCTTTGCATTCTATGGTCGAAGCCTATCTGCATTCAAGGCACCACACATCCAACAGATGCCTCTGCTTTAAGGGTTTTGTACATCAGTTTAGACTCCCCCTCTCAGTTAACCCAGTGGAACGCAAATGGGGGTGACCCTTGTGGACAATCATGGAAGGGGATTACTTGCTCCGGCTCACGGGTTACAGAAATAAACTTATCTGGCCTTGGACTCAGTGGATCGCTTGGATACCAGCTTGGAAGTATGACATCGGTAACCAACCTGGATGTGAGTAATAACAATCTTGGAGGCGAGATTGTCTACAACCTTCCACCTAACCTGAAAAGACTAAATCTTGGACGAAACAACTTCAATAAAGGCATCCCTTATTCTATTTCTATGATGACTTCTCTTCAATACTTAAACATCAGTCGTAATCAGCTTCAGGATCCATTGAATGATGTGTATGGCCAGCTAACTTCCCTATCCATATTGGATCTGTCTTTCAATGCTATGTCAGGCAACCTGCCTCAGAGTTTTAGCTCACTTTCTGGCATCAGCTCTATGTATTTGCAAAACAATCAGTTCACTGGCACAATTGATGTCCTTGCAACTCTTCCTCTTGATAACCTGAATGTTGAAAATAACCGTTTCACTGGTTGGATCCCTGAACCACTGAAAAACATCAACTTGCAGAAAAATGGAAACTCCTGGAACACCGGTCCTGCACCCCCTCCTCCGCCTGGTACACCCCCAGCCACCAGAAGAAACCGAAGTCACAATCCAGGTGGCAGTCCATCCAATGGTGGTTCTAGTGAAGGTCAGAAATCAGGTATTGGTGGTGGTGCCATTGCAGGAATTATCATTTCTGTGTTTGTTGTTGGAGCTGTAGTAGCATTCTTCCTCGTCAGGAGGAGATCCAAGAGACCGTTGACGGATATTGAAAAGCTCGACAATCAACCCCTGCAACCTCTTAAAATGACTGCGGCACAAGAAACAAAGTCGGAAGATTCTTCCTCCACATTTTATCCAACATCATTTGAATCTTCTGCTGCAATTAACCTTAAACCCCCACCTATTGATCGTCACAAATCGTTTGACGAAGATGACTTTGCCAAACGAGCCCCAGTCAAGAAGGCTAGTGCTGCCGCTCCTATTAATGTAAAGTCATATTCAATAGCAGACCTTCAAATGGCGACAGGCAGCTTCAATGTTGATAATCTTCTTGGTGAGGGATCATTCGGACGTGTATATCGAGCTGAATTTGATGACGGGAAGGTTCTTGCCGTGAAAAAAATAAATTCATCTGCACTACCTCGGGAATTATCCGAAGATTTCACTGATATTGTTTCTAAAGTCTCCCAGTTACACCATCCCAATGTAACTGAACTCGTCGGTTATTGCTCAGAGCATGGGCAGCATTTGCTTGTGTACGAGTTCCATAGAAATGGCTCGCTTTACGACGTCTTACATCTATCGCTATCAGATGAATACAACAAACCTCTGATATGGAATTTACGCGTTAAGATCGCTCTGGGAACAGCGCGCGCATTAGAGTATCTTCATGAAGTGTGCTCCCCATCAATTGTTCATAGAAACATCAAGTCTGCTAACATATTGCTGGATGCCGAACTCAGCCCCCATCTTTCTGATTCTGGACTGGAAAGCTTTATACCAAATGCAGATCAGGCAATGGATGGGAGTGGAAGTTCAGGATACACTGCGCCGGAGGTTACCATGTCGGGCCAATATACTCTGAAAAGTGATGTGTATAGTTTTGGAGTAGTCATGTTGGAACTGTTGACTGGGCGAAAACCATTTGATAGTTCAAGGCCAAGGTCGGAGCAATCTTTGGTTCGATGGGCAACGCCTCAGCTTCATGACATTGATGCTTTAACCAAGATGGTTGATCCCGAACTCAAAGGCCTTTATCCTGTTAAATCTATCTCCCGATTTGCAGATGTGATTGCACTTTGCGTTCAGACGGAACCTGAGTTTAGACCTCCAATGTCGGAGGTGGTCGAGGCGTTGGTCCGCTTGGTGCAACGAGCAAACATGAGTAAGAGAACATATGGAAACGACAATGCAACATCTCCCAGAGGGGAGATGGGTGGAGAGGACACACCATAA 2148 44.97 MDWMWRELISFIILCILWSKPICIQGTTHPTDASALRVLYISLDSPSQLTQWNANGGDPCGQSWKGITCSGSRVTEINLSGLGLSGSLGYQLGSMTSVTNLDVSNNNLGGEIVYNLPPNLKRLNLGRNNFNKGIPYSISMMTSLQYLNISRNQLQDPLNDVYGQLTSLSILDLSFNAMSGNLPQSFSSLSGISSMYLQNNQFTGTIDVLATLPLDNLNVENNRFTGWIPEPLKNINLQKNGNSWNTGPAPPPPPGTPPATRRNRSHNPGGSPSNGGSSEGQKSGIGGGAIAGIIISVFVVGAVVAFFLVRRRSKRPLTDIEKLDNQPLQPLKMTAAQETKSEDSSSTFYPTSFESSAAINLKPPPIDRHKSFDEDDFAKRAPVKKASAAAPINVKSYSIADLQMATGSFNVDNLLGEGSFGRVYRAEFDDGKVLAVKKINSSALPRELSEDFTDIVSKVSQLHHPNVTELVGYCSEHGQHLLVYEFHRNGSLYDVLHLSLSDEYNKPLIWNLRVKIALGTARALEYLHEVCSPSIVHRNIKSANILLDAELSPHLSDSGLESFIPNADQAMDGSGSSGYTAPEVTMSGQYTLKSDVYSFGVVMLELLTGRKPFDSSRPRSEQSLVRWATPQLHDIDALTKMVDPELKGLYPVKSISRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNATSPRGEMGGEDTP* 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25887747 25904354 + Chy1G021210.1 Chy01g02121 219302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02121 715 SUPERFAMILY L domain-like 44 234 - -
Chy01g02121 715 MobiDBLite consensus disorder prediction 260 281 - -
Chy01g02121 715 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Chy01g02121 715 Pfam Leucine Rich repeat 142 156 IPR001611 GO:0005515
Chy01g02121 715 Pfam Leucine Rich repeat 96 114 IPR001611 GO:0005515
Chy01g02121 715 Gene3D Transferase(Phosphotransferase) domain 1 488 705 - -
Chy01g02121 715 ProSiteProfiles Protein kinase domain profile. 409 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02121 715 PANTHER OS01G0253100 PROTEIN 19 708 IPR045271 GO:0004714|GO:0006468
Chy01g02121 715 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 19 708 - -
Chy01g02121 715 Gene3D Ribonuclease Inhibitor 28 252 IPR032675 -
Chy01g02121 715 SUPERFAMILY Protein kinase-like (PK-like) 392 683 IPR011009 -
Chy01g02121 715 MobiDBLite consensus disorder prediction 695 715 - -
Chy01g02121 715 MobiDBLite consensus disorder prediction 238 283 - -
Chy01g02121 715 Pfam Protein tyrosine and serine/threonine kinase 411 683 IPR001245 GO:0004672|GO:0006468
Chy01g02121 715 Gene3D Phosphorylase Kinase; domain 1 374 486 - -
Chy01g02121 715 CDD STKc_IRAK 415 686 - -
Chy01g02121 715 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02121 Chy-Chr1:25887747 Chy03g00317 Chy-Chr3:3599734 0 dispersed
Chy01g02121 Chy-Chr1:25887747 Chy04g00715 Chy-Chr4:8714168 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71010 PF07714 PK_Tyr_Ser-Thr 3.30E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02121 - - csv:101213107 1318.91