Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02129 ATGTGGTGGAGATCGGCCTCTTTCATCCTCGACAAGCAGCAGGCTGAAGGAGCTTCAAAGCCCCCCGAAACCCTTTCCATTTCCCCACCCACGCAATCTTCTATGGCGGATGCATTTCAGAACCCTAACCCTAAAATTTCAGCCTATTACCAAAGTAGAGCTGCCCACACGGCCGTCGTCACCAGTGATTGGCTTGCCCAGGCGCAGGCCGCTGTTGGATTCCAAACCGACGATCAGATACTGTCGGAAACTGATACCAGGGACTCTGAATCCGGTAAGCCGTTTAGTGTGATTGATGAGTTTAATAACTGGAGGAAACAGCCGGATTTGGCTGAGGCCGTTGCAGCTATTCGGGCTTTGGCGGCCGTCATAAGGTCTAGTCAGGCCACGACTATGATGGAGCTCGAAATTGAGCTGAAAAAGGCCTCAGACTCCCTAAAATCGTGGGATACAACTTCGATATCATTAACAGCTGGCTGTGATTTGTTCATGCGGTATGTTACTCGAACCTCGGCTTTAGAATACGAGGACTTCAAGTCTGCTAAATCTCGCCTGATTGAACGTGCAGAAAAGTTTGGGGAGATATCCTGTAAGGCACGGAGAATTATTGCAATGCTTAGTCAGGATTTCATTTTTGATGGCTGTACAATTTTGGTCCATGGTTTCTCTAGAGTCGTGATGGAAGTTCTGAGGTTGGCTGCACAGAATAAGAAGCTCTTTAGAGTGTTTTGCACAGAAGGAAGACCGGACAGGACAGGTTTGCGTTTATCCAACGAGCTAGCCAAACTTGATGTCCCTGTAAAGCTCCTAATTGACTCAGCAGTAGCATATGCAATGGATGAGGTTGACATGGTTCTTGTTGGTGCTGATGGAGTAGTTGAGAGTGGAGGTATAATCAATATGATGGGCACATATCAAATTGCATTAGTGGCACATAGCATGAACAAACCGGTGTATGTGGCTGCTGAGAGTTACAAGTTTGCTCGACTGTACCCATTGGATCAAAAAGACATGGCCCCTGCTCTGCGTCCAATAGATTTTGGGGTTCCAATCCCATCAAAGGTTGAAGTTGAAAAATCTGCTCGAGACTATACTCCTCCTCAATACCTTACTCTTCTCTTTACAGATTTGGGTGTTCTCTCTCCATCTGTGGTGAGTGACGAACTCATCCAACTATATTTATAG 1185 46.58 MWWRSASFILDKQQAEGASKPPETLSISPPTQSSMADAFQNPNPKISAYYQSRAAHTAVVTSDWLAQAQAAVGFQTDDQILSETDTRDSESGKPFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRSSQATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFKSAKSRLIERAEKFGEISCKARRIIAMLSQDFIFDGCTILVHGFSRVVMEVLRLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYAMDEVDMVLVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMAPALRPIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLSPSVVSDELIQLYL* 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25973601 25977074 + Chy1G021290.1 Chy01g02129 219310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02129 394 Pfam Initiation factor 2 subunit family 108 382 IPR000649 GO:0044237
Chy01g02129 394 MobiDBLite consensus disorder prediction 19 33 - -
Chy01g02129 394 Gene3D - 94 195 IPR042528 -
Chy01g02129 394 Coils Coil 132 152 - -
Chy01g02129 394 MobiDBLite consensus disorder prediction 13 33 - -
Chy01g02129 394 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 38 394 - -
Chy01g02129 394 Gene3D - 198 394 IPR042529 -
Chy01g02129 394 SUPERFAMILY NagB/RpiA/CoA transferase-like 110 393 IPR037171 -
Chy01g02129 394 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 38 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02129 Chy-Chr1:25973601 Chy02g02387 Chy-Chr2:27674924 1.66E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02129 K03239 - csv:101211420 751.895