Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g02185 | ATGAATCTAGGTGCGGCGGAGGAAGAATCGCCGCAAGAAATTCATATTCCGGCCGAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGCGTTGTTTTCAGGTGTTTCCGCTTCTCTTTACCCTATGGTTGTGTTGAAAACTCGTCAACAGGTTTCTCATTCGCAACTTTCTTGCATCAGAACCGCATTTTCTCTTGTCCGCCATGAAGGTTTCCGAGCTCTTTACCGAGGATTTGGTACTTCTCTAATGGGAACTATCCCTGCTAGAGCTTTATACATGGGAGCTCTTGAGATTACAAAGAGCTATGTCGGAACTGCCACCATTAGAGTTGGATTCCCCGAAACTAGTGCAGCTACCATTGCTAACGCCGCTGCTGGATTGAGTGCGGCAATGGCAGCTCAGCTTGTATGGACTCCTGTTGATGTTGTGAGTCAAAGACTCATGGTTCAACCAAGATACAACAATCCCAATTCTTCCTCAACTCATTACATCAATGGAATCGACGCGTTTCGAAAGATCCTCAAGGCCGATGGCCTCCGTGGCCTCTACCGAGGATTTGGAATATCGATTTTGACCTATGCACCGTCGAATGCCGTGTGGTGGGCTTCTTATTATGTAGCACAGCGGCTGGTTTGGGGTGGAATTGGGTGCTGTTATCATGCAAAGAAGATTCAGGTTGATGAAGATAATGAAAATGGAGGATGTAGTAACAATGTCTACAAACCCGATTCCAAAACTGTGATTGCAGTTCAAGGAGCGAGCGCAGCAATGGCAGGGAGTATATCAGCTTTGATAACAATGCCACTCGATACAATCAAGACGAGATTGCAAGTGTTGGATGGGGATGAAAATGGGAGAAGAGGACCAACTATAGGACAGACATTGAGGAATTTGGTGAGGGAAGGAGGATGGACGGCTTGTTATCGAGGGTTGGCACCCCGGTGTGCATCGATGTCGATGTCTGCGACGACAATGATCACTACATACGAGTTTTTGAAACGGCTATCAACAAAGAATCAAGAGAGTTTAACAAGCTAA | 1056 | 45.93 | MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVSHSQLSCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEITKSYVGTATIRVGFPETSAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPRYNNPNSSSTHYINGIDAFRKILKADGLRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCCYHAKKIQVDEDNENGGCSNNVYKPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQESLTS* | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 26400850 | 26401905 | - | Chy1G021850.1 | Chy01g02185 | 219366 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g02185 | 351 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 108 | IPR018108 | - | |
Chy01g02185 | 351 | Gene3D | Mitochondrial carrier domain | 30 | 350 | IPR023395 | - | |
Chy01g02185 | 351 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 216 | IPR018108 | - | |
Chy01g02185 | 351 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 348 | - | - | |
Chy01g02185 | 351 | PRINTS | Mitochondrial carrier protein signature | 132 | 154 | IPR002067 | GO:0055085 | |
Chy01g02185 | 351 | PRINTS | Mitochondrial carrier protein signature | 81 | 99 | IPR002067 | GO:0055085 | |
Chy01g02185 | 351 | SUPERFAMILY | Mitochondrial carrier | 23 | 338 | IPR023395 | - | |
Chy01g02185 | 351 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN | 1 | 348 | - | - | |
Chy01g02185 | 351 | Pfam | Mitochondrial carrier protein | 38 | 109 | IPR018108 | - | |
Chy01g02185 | 351 | Pfam | Mitochondrial carrier protein | 126 | 217 | IPR018108 | - | |
Chy01g02185 | 351 | Pfam | Mitochondrial carrier protein | 256 | 345 | IPR018108 | - | |
Chy01g02185 | 351 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 252 | 341 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g02185 | Chy-Chr1:26400850 | Chy09g00188 | Chy-Chr9:1629821 | 2.19E-86 | dispersed | |
Chy08g00665 | Chy-Chr8:14538425 | Chy01g02185 | Chy-Chr1:26400850 | 9.69E-22 | transposed | |
Chy06g00780 | Chy-Chr6:5481718 | Chy01g02185 | Chy-Chr1:26400850 | 3.14E-71 | transposed | |
Chy01g02185 | Chy-Chr1:26400850 | Chy07g00267 | Chy-Chr7:2105148 | 5.18E-173 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g02185 | K15121 | - | csv:101210602 | 660.603 |