Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02185 ATGAATCTAGGTGCGGCGGAGGAAGAATCGCCGCAAGAAATTCATATTCCGGCCGAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGCGTTGTTTTCAGGTGTTTCCGCTTCTCTTTACCCTATGGTTGTGTTGAAAACTCGTCAACAGGTTTCTCATTCGCAACTTTCTTGCATCAGAACCGCATTTTCTCTTGTCCGCCATGAAGGTTTCCGAGCTCTTTACCGAGGATTTGGTACTTCTCTAATGGGAACTATCCCTGCTAGAGCTTTATACATGGGAGCTCTTGAGATTACAAAGAGCTATGTCGGAACTGCCACCATTAGAGTTGGATTCCCCGAAACTAGTGCAGCTACCATTGCTAACGCCGCTGCTGGATTGAGTGCGGCAATGGCAGCTCAGCTTGTATGGACTCCTGTTGATGTTGTGAGTCAAAGACTCATGGTTCAACCAAGATACAACAATCCCAATTCTTCCTCAACTCATTACATCAATGGAATCGACGCGTTTCGAAAGATCCTCAAGGCCGATGGCCTCCGTGGCCTCTACCGAGGATTTGGAATATCGATTTTGACCTATGCACCGTCGAATGCCGTGTGGTGGGCTTCTTATTATGTAGCACAGCGGCTGGTTTGGGGTGGAATTGGGTGCTGTTATCATGCAAAGAAGATTCAGGTTGATGAAGATAATGAAAATGGAGGATGTAGTAACAATGTCTACAAACCCGATTCCAAAACTGTGATTGCAGTTCAAGGAGCGAGCGCAGCAATGGCAGGGAGTATATCAGCTTTGATAACAATGCCACTCGATACAATCAAGACGAGATTGCAAGTGTTGGATGGGGATGAAAATGGGAGAAGAGGACCAACTATAGGACAGACATTGAGGAATTTGGTGAGGGAAGGAGGATGGACGGCTTGTTATCGAGGGTTGGCACCCCGGTGTGCATCGATGTCGATGTCTGCGACGACAATGATCACTACATACGAGTTTTTGAAACGGCTATCAACAAAGAATCAAGAGAGTTTAACAAGCTAA 1056 45.93 MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVSHSQLSCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEITKSYVGTATIRVGFPETSAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPRYNNPNSSSTHYINGIDAFRKILKADGLRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCCYHAKKIQVDEDNENGGCSNNVYKPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQESLTS* 352
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 26400850 26401905 - Chy1G021850.1 Chy01g02185 219366
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02185 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Chy01g02185 351 Gene3D Mitochondrial carrier domain 30 350 IPR023395 -
Chy01g02185 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 216 IPR018108 -
Chy01g02185 351 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 348 - -
Chy01g02185 351 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Chy01g02185 351 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Chy01g02185 351 SUPERFAMILY Mitochondrial carrier 23 338 IPR023395 -
Chy01g02185 351 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 348 - -
Chy01g02185 351 Pfam Mitochondrial carrier protein 38 109 IPR018108 -
Chy01g02185 351 Pfam Mitochondrial carrier protein 126 217 IPR018108 -
Chy01g02185 351 Pfam Mitochondrial carrier protein 256 345 IPR018108 -
Chy01g02185 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 252 341 IPR018108 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02185 Chy-Chr1:26400850 Chy09g00188 Chy-Chr9:1629821 2.19E-86 dispersed
Chy08g00665 Chy-Chr8:14538425 Chy01g02185 Chy-Chr1:26400850 9.69E-22 transposed
Chy06g00780 Chy-Chr6:5481718 Chy01g02185 Chy-Chr1:26400850 3.14E-71 transposed
Chy01g02185 Chy-Chr1:26400850 Chy07g00267 Chy-Chr7:2105148 5.18E-173 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02185 K15121 - csv:101210602 660.603