Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02190 ATGGCGACTCCCATGGCTGAAGAAGAAACCTTCGATTCCTATTCCAACAACCATACGGTGATTGCGATTAGTAGGGACAAGAACAGTCAATATGCGGTTAAATGGGCTGTGGAACATTTGTTCAATAGGAAGAACACTGGCGAATGCGTTCTTATTCATGTTCGGACTCAGAGTTTGCATCCCCAGGAGGTGGATACGATTCCTAAGGAGTTCCGGCCACCAACTGAAGCTGAGTTGCATCAGTTCTTCCTTCCCTATCGAGGATTTTGCGCACGAAAAGGAATAGTTGCAAAGGAGATAATCATCCATGATATTGATGTTCCAAATGCACTTATTGACCATATCAGTAAACACTCCATTAGCAATATTGTTGTGGGTGCTTCCAACCGGAATCCTATTATGAGGAAGCTCAAGAATCCTGATGTTGCAACGTGCTTACTCAAATCAACTCCAGAATCATGTTCTGTATATGTCATAGCTAGAGGAAAAGTTCATACGAAGAGGTTGAGGAAGCGAAATAAGTCACAAACTGACATGACAGAAACACAAACCGGAACTCCACGAATCGGCAGGTGTTTATCAAAAGCACAAAAATCAGCATATTCTAGTATCTCTGGACTATCTGAAGATAAATACAGGCATAGTTCTGGCACCAGTAATGATTCAACGTCAGGTATTAGTGACTTTTCGGGGCCTCTCAGTTTCAAATCAATTGAAACATCCTTTGAGAACCAAGATTTTTCCCCAAGTTCCTCAGAGACTAGTACGAGGAGCTATGTTTCCTCTAGCACCCCACCTTCAATCGAATATGAGATGAAAAAGTTGAGGTTTGAACTCAAAAAAATGATGGAAATGTATGACTCGGCTTGCAAGGAAGCTGCAGTAGCAAAACAAAAGGCAAAAGAACTCCGACATTTGAAGATGGAAAAGGAAGAAGACAACAAAATTGAGTGCGGTAAATCTACAGATGAGGCTCTAACAACATTGGCTGAGTTTGAGAAGCAAAAGAACAAGGCTGAAGCAGAAGCAACTTTAGTGGCACAGAAGTTGGCTGAATTAGAGACCCAGAAAAAACGAATTATTACTGAAGAAAAAGCTAGGATTGAGGCAGAGGAGAGGAAGAAAACAATGGAGTTATTTGAACGCAGTAATATTTGTTATAGACGATTCAGCATTGATCAAATCGAAGTTGCAACAGATCATTTTAACGAGTCAAACAAGATTGGTGAAGGTGGCTATGGACCTGTTTACCAAGCCTTACTTGAGCATACTTCTGTTGCCATTAAGATCTTGAGACCGGATAGATCACATGGGCAGCGACAATTCCAGCAAGAGATTGAGGTTCTAAGCCGGATGAGGCATCCACACATGGTTCTCCTCTTAGGTGCCTGCCCAGAATACGGTTGCCTTGTTTATGAATATATGGAAAATGGGAGTTTGGAAGACCGTCTCTTCCGAAAAGATAACACTCCTCCAATCCCTTGGAGAATCCGCTTCAGGATAGCTTGTGACATTGCCACTGCCCTACTCTTCCTTCATCAAATGAAGCCAGAACCTGTGGTGCATCGTGATCTTAAGCCAGCCAACATTCTCTTAGATCACAACTATGTGAGCAAAATAGGTGACGTGGGTTTGGCCAGGCTAGTTCCACCGTCGGTTGCTGATAGTGTCACTCAATATCACATGACTGCTGCAGCTGGAACCTTTTGTTACATTGATCCAGAATATCAACAAACAGGAATGTTGGGTGTGAAATCAGATATTTACTCATTTGGTGTTCTTCTACTTCAGCTCATCACTGCAAGGTCACCGATGGGTCTTTCATATCAGGTCGAGGAGGCTATTGAACATGGCAAATTTCCAGAGATACTTGATCCGACAATAACAGATTGGCCTATTGAAGATACTCTTGGACTCGCTCAATTAGCCCTCAAGTGCTGTGAGCTAAGAAAAAGAGACAGGCCCGACCTTCGTACGGTTCTAATGCCAGAACTGTCCAGGTTAAAAAATCTGGGGTCGGGTGAAACACCACCGAAGAGCAAGCTTGCAAATGTCAGCAGAGCACATGATCAACAAGTCCTTAACTCGGCTCCAGTCTTGAAGGGATCCGAAAGCGAGATCTATGTGAGAAAAAGATGGGAGCGATTGAAAGTGAGTACGAGATTTTGGAGCCAAAAGGGTGGTATTGGTTTGAATACCATTTCTTCACAAATAAAGAAAAAATGGAGCATACCAAGTATACCAATCAGTGGAAAACGAGTTGATGTATCGAAGAAGAAGCAGCAACCGCAGCAAATCTCTGAGCGTTGTTGGTCTTTTGCAAGTTGTGCTTCTGCTGCTACGTTGGGGTTCAAGAAACTGCACTCTTTTTCATAA 2376 42.85 MATPMAEEETFDSYSNNHTVIAISRDKNSQYAVKWAVEHLFNRKNTGECVLIHVRTQSLHPQEVDTIPKEFRPPTEAELHQFFLPYRGFCARKGIVAKEIIIHDIDVPNALIDHISKHSISNIVVGASNRNPIMRKLKNPDVATCLLKSTPESCSVYVIARGKVHTKRLRKRNKSQTDMTETQTGTPRIGRCLSKAQKSAYSSISGLSEDKYRHSSGTSNDSTSGISDFSGPLSFKSIETSFENQDFSPSSSETSTRSYVSSSTPPSIEYEMKKLRFELKKMMEMYDSACKEAAVAKQKAKELRHLKMEKEEDNKIECGKSTDEALTTLAEFEKQKNKAEAEATLVAQKLAELETQKKRIITEEKARIEAEERKKTMELFERSNICYRRFSIDQIEVATDHFNESNKIGEGGYGPVYQALLEHTSVAIKILRPDRSHGQRQFQQEIEVLSRMRHPHMVLLLGACPEYGCLVYEYMENGSLEDRLFRKDNTPPIPWRIRFRIACDIATALLFLHQMKPEPVVHRDLKPANILLDHNYVSKIGDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITARSPMGLSYQVEEAIEHGKFPEILDPTITDWPIEDTLGLAQLALKCCELRKRDRPDLRTVLMPELSRLKNLGSGETPPKSKLANVSRAHDQQVLNSAPVLKGSESEIYVRKRWERLKVSTRFWSQKGGIGLNTISSQIKKKWSIPSIPISGKRVDVSKKKQQPQQISERCWSFASCASAATLGFKKLHSFS* 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26459732 26463954 + Chy1G021900.1 Chy01g02190 219371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02190 791 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 18 688 - -
Chy01g02190 791 Gene3D Transferase(Phosphotransferase) domain 1 475 677 - -
Chy01g02190 791 SUPERFAMILY Protein kinase-like (PK-like) 379 661 IPR011009 -
Chy01g02190 791 CDD STK_N 19 162 - -
Chy01g02190 791 PANTHER OS02G0152300 PROTEIN 18 688 - -
Chy01g02190 791 MobiDBLite consensus disorder prediction 242 265 - -
Chy01g02190 791 Pfam Protein kinase domain 402 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02190 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Chy01g02190 791 Coils Coil 322 373 - -
Chy01g02190 791 MobiDBLite consensus disorder prediction 167 192 - -
Chy01g02190 791 Gene3D Phosphorylase Kinase; domain 1 369 474 - -
Chy01g02190 791 SMART serkin_6 402 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02190 791 Gene3D HUPs 6 161 IPR014729 -
Chy01g02190 791 MobiDBLite consensus disorder prediction 178 192 - -
Chy01g02190 791 ProSiteProfiles Protein kinase domain profile. 402 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02190 791 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 159 - -
Chy01g02190 791 Coils Coil 293 313 - -
Chy01g02190 791 Pfam Universal stress protein family 19 138 IPR006016 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02190 Chy-Chr1:26459732 Chy03g00674 Chy-Chr3:9312755 0 dispersed
Chy09g01031 Chy-Chr9:12833155 Chy01g02190 Chy-Chr1:26459732 3.61E-121 dispersed
Chy01g02190 Chy-Chr1:26459732 Chy04g00284 Chy-Chr4:2522498 2.07E-18 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71012 PF00069 Pkinase 1.20E-41 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02190 - - csv:101209859 1317.37