Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02211 ATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTTTTTTTACCACTATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACCAACTTCCTTTGGGCTCTCTTGGCTGGCCTTTCATCGGTGAGACTATTGAGTTCATCTCCAGCGCTTATTCGGACCGTCCTGAAACCTTCATGGACAAGCGCCGCCACCTGTACGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTCTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAGAGTGATGCCAAGGCCTTTGTACCGTCTTATCCGAAATCTTTGACAGAGTTGATGGGGAAGTCTTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGCAAACTGGACTGAGAACAATCCTATTTATCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTAAATCCTGGTCAAAGTATGGAGTTTCTCAAGAAACAGTTTCAAGAGTTCATAGCTGGGCTTATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGGAAAAGCTGTGGAATTTCCACTGTCCCAAAAGATATAATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTAACAGATGATCTAATAGCAGAGAACATGATTGATATGATGATTCCCGGAGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCTGATTGCCCTGCCGCACTTCAACAGTTGACGGAGGAAAACTTGAAAATGAAAGGACAGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCATTTACGCAGAGTGTGATCACTGAAACTCTAAGGATGGGAAACATTATAATTGGAGTGATGCGCAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACCTAAGGGTTGGTCGGTTCTTACATACTTTAGATCTGTTCATCTTGATGACAATCACTACGACTTCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGAGATGAGTAGTTGCAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCTGAAGAAGATAAAATCATAAACTTCCCCACAGTGAGGATGAAAAAGAGGATGCCAGTTTGGGTGAAGAGAAGAAGGGACCCATGA 1425 41.33 MDSLWDVLVVTAIFFTTIILYRNCFRLLRSKFCNQLPLGSLGWPFIGETIEFISSAYSDRPETFMDKRRHLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMANWTENNPIYLQDETKNISFQVLVKILISLNPGQSMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISTVPKDIMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGQKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLIPKGWSVLTYFRSVHLDDNHYDFPYKFNPWRWQDREMSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDKIINFPTVRMKKRMPVWVKRRRDP* 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26589152 26592618 + Chy1G022110.1 Chy01g02211 219392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02211 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Chy01g02211 474 Coils Coil 307 327 - -
Chy01g02211 474 PANTHER CYTOCHROME P450 26 15 466 - -
Chy01g02211 474 Gene3D Cytochrome P450 30 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g02211 474 Pfam Cytochrome P450 37 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g02211 474 SUPERFAMILY Cytochrome P450 35 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g02211 474 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g02211 474 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g02211 474 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g02211 474 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g02211 474 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy01g02211 474 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 15 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02211 Chy-Chr1:26589152 Chy07g00130 Chy-Chr7:1110303 5.05E-81 dispersed
Chy02g00608 Chy-Chr2:3694692 Chy01g02211 Chy-Chr1:26589152 1.41E-161 transposed
Chy04g01007 Chy-Chr4:14812685 Chy01g02211 Chy-Chr1:26589152 7.03E-70 transposed
Chy04g01358 Chy-Chr4:20218963 Chy01g02211 Chy-Chr1:26589152 1.11E-62 transposed
Chy06g01005 Chy-Chr6:7595783 Chy01g02211 Chy-Chr1:26589152 2.45E-62 transposed
Chy06g01966 Chy-Chr6:23691853 Chy01g02211 Chy-Chr1:26589152 3.60E-88 transposed
Chy07g01292 Chy-Chr7:17581445 Chy01g02211 Chy-Chr1:26589152 1.75E-111 transposed
Chy08g00182 Chy-Chr8:4204469 Chy01g02211 Chy-Chr1:26589152 1.80E-100 transposed
Chy09g00186 Chy-Chr9:1588409 Chy01g02211 Chy-Chr1:26589152 1.93E-106 transposed
Chy09g00380 Chy-Chr9:3337716 Chy01g02211 Chy-Chr1:26589152 7.15E-89 transposed
Chy10g00431 Chy-Chr10:10244686 Chy01g02211 Chy-Chr1:26589152 7.97E-133 transposed
Chy11g01618 Chy-Chr11:22715412 Chy01g02211 Chy-Chr1:26589152 4.06E-40 transposed
Chy12g01337 Chy-Chr12:17691559 Chy01g02211 Chy-Chr1:26589152 6.98E-68 transposed
Chy01g02211 Chy-Chr1:26589152 Chy04g00646 Chy-Chr4:7383410 5.38E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02211 K12638 - csv:101217830 892.493