Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02233 ATGGCGAAGACGAGAACGGTGATAAAAACAGAAGTTAGAGGGAGTTTAGATATGGCCATTGGTAGAATATGTTGTAGAGATAACAGTGAAGTGAAGGGAAAGTTAGATAACAACAAGCTCCAAGGCTCTGTTCCATCTGAACTTCTTAAGAGAGTCGATGATGGTTCATTATCATTAAGTTTTCAAGGGAATCCAAATCTAGTTTGTACATCAGATTCGTGCAAGAGTAAGAAGAAGACAACTAGTATTGTTATTCCAATTGTAGCATCAGTTGGTGGATTCATAGGCATCGTAGTAGTTTCAATCATCGTTCTTTTAATTGTTAAATCAAGGAAGAAACAACAAAATAAAACCGCTGTTCCAAAAGTGGATCCATCAGGACCCTCACGACCCAATGACCAACTAAGTGATCAGTTCTTGGAGACAAGGAGGCGGCAGTTCACATATTCAGAAGTCTTGAGGATGACCAATCATTTCGAAAGAGTTCTAGGAAAAGGAGGTTTTGGGATAGTTTACTATGGCACTATAGACAACACTCAAGTGGCCGTGAAGATGCTTTCTCAAGCTTCAGGTCTTGGTTATCAACAGTTTCAAGCAGAGGTTACACTTCTTTTGCGAGTTCACCATAAAAATTTGACAAGTCTTGTGGGATATATGAATGAAGGAGACCGCCTTGGTCTCATTTATGAGTTCATGGCCAAAGGAAACTTAGCAGAGCATCTTTCAGAGAAGAGCTCACATGTCTTAAGTTGGCAAGATAGACTCCGAATAGCCTTGGATGCAGCACAAGGATTGGAGTACCTGCACGATGGTTGCAAACCGCCCATAATCCACAGAGATGTGAAAACAACAAACATCTTACTGACCGAGAATTTCCAAGCCAAACTTGCAGATTTTGGTTTGTCCAAAAGCTTCCAAACAGAGGGCAACAACACCCACATGTCCACCGTTGTTGCTGGCACTATTGGTTACCTTGATCCAGAGTACTATAAATCCAACAGGTTAACTGAGAAAAGTGATGTGTTTAGCTTTGGGGTTGTTCTATTGGAGATAGTCAGCTGCAAACCTGTAAGGCCACTAACTGAGTCTGAAGCTCATATCATCAAATGGGTAAACTCCATGGCAGCTCGAGGGGATATTAATGGCATAATTGACCGAAGATTGGACAGTAATTATGAAGTGAACTCAGTTTGGAAGGCAGTGGAAGTAGCGATAACTTGTGTATCCGAGAACCCTGGAAGAAGACCGACAATGAACCAAGTGGTGGCAGAACTGAAGAATTGCTTAGCCATAGAATTGGAACGGATCAGGGAGAATCAAGCTTTGAATTCGACAGACTCCTCCATGAACACAATGAACCTAGGTAACAACAAGCTCTCAGGTCCAATTCCAGCTGAGCTTTTGAAAAGATCCAATGATGGATCACTATCATTAAGTGTGGGAGGTAACCAAAATCTGGAAGGATGTGCATCAGATCCTTGTCCAAAGAATGAGGAGAAAAAAAACAACATCATCATTCCAATTGTAGCATCAATTGGCGGATTCCTAGTTGTCGTCACAATTGTTGCAATAACCTTTTGGATCATTAAATCTCGAAAGAAACAACAAGGTAAAAATGTTGTCTCAGTGGTGGATAAGTCAGAAACCAACAGTCCGTTAGGTACTTCATTGGAGGTGAGAAGCCGACAATTTACTTATTCTGAGGTGGTGAAAATGACCAACAATTTCAAAAAAGTCCTGGGTAAAGGAGGTTTCGGGGAGGTCTACTATGGTGTCATTGACGAAATTGAAGTGGCAGTGAAGATGTTGTCTTTATCATCATCACAAGGATATCGGCAATTTCAAGCAGAGGTTACCCTTCTTATGAGAGTTCACCATAGGAACTTGACTAGCCTTGTTGGATATTTGAACGAAGAAAACCACCTTGGCCTCATTTACGAGTACATGGCGAATGGAGATTTGGCCGAACATCTTTCAGAGAGGAGTGTACGTATCATAAGCTGGGAAGATAGACTTCGAATAGCTATGGATGCAGCTCAAGGACTGGAATACCTGCACTACGGTTGTAAGCCACCCATTGTCCACAGAGATGTGAAAACAACAAACATCCTGTTGACAGATAATTTCCAAGGCAAGCTTGCAGATTTTGGTCTTTCCAAAAGCTTCCCCACAGATGGCAACACCCACATGTCCACCGTTGTTGCTGGCACTCCTGGTTATCTTGATCCAGAGTACTACGTATCAAACAGGCTAACAGAGAAAAGCGATGTATACAGCTTTGGGATAGCTCTATTAGAGATAATAAGTTGCAAACCAGTAATATCAAGAACAGGAGATACACCACATATAGCTAAATGGGTTACCTCTTTGCTAGCGCTAGGAGATATCCAGAGCATAGTGGATCCAAGATTAGAAGGGCAGTATGAAAGAAACTCTGTTTGGAAGACGGTGGAAGTGGCAATGGCTTGTGTAGCGGCAAATTCCAGTAGAAGGCCGACGATGAGTGACGTTGTGGCGGAACTCAAAGATTGCTTAGCTACAGCATTGAGTCGAAATCATGAGAATGGTTCACTTGAATCAACAAATTTCGCTGAAACGAGGTCCATCTCTATAGGAATCAATGCTTCCAATTCAAGTCCCGTGGCGAGAAACTTAGAGAATAACAATCTCACAGGCTCTCTTCCACCTGAGCTTAAAAATAGACAGAAGAACGGTCTTACAATAAGAAAAGCAACAATAATCATTCCAGCAGTAGCCTCAGTGGGTGGATTGCTTGCATTCCTCATAATTGCAGTGATTGTCTATTGGATTGCTAAATCAAATAAGAAACAACAAGGTGATGATGTTGCTTTGATAGGGAATCCCACAAAGGCATACACACAATTAGGCAGTTCCTTGGAGACAAGGAGACGACAGTTTACTTTCGCAGAAGTTGTGATGATAACCAACAATTTTGAGAAGGTTCTTGGCAAGGGAGGTTTCGGGATGGTTTACTATGGAGTTCTAGATGACACTCAAGTGGCTGTGAAGATGATTTCTCCATCAGCAGTACAAGGCTACAGTCAGTTTCAAGCAGAGGTTACAATTCTTATGAGAGTTCACCACAGAAACTTAACAAACCTTGTAGGGTATATGAATGATGGAGGTCACCTTGGCCTCATTTATGAGTACATGGCCAAAGGAAACCTGGCCGAGCATCTTTCTGGTAATCTTCTAGCTCTAGCTACAAGATACATGTTACAACACATGCTTCACAACCCAATTTATGAAATGAAAATAAATCAAAACCGGAAGCTTAAACACACGTTTTGCTTGTCTAACACAGAGAAAAGCACAAGTATCTTAAGCTGGGAAGACAGACTTCGGATTGCAATAGATGCAGCTCAAGGGCTGGAGTACCTGCATCATGGGTGTAAGCCACCAATAGTCCACAGGGATGTGAAAACAACAAACATCTTATTGACAGAAAAACTCAACGCCAAACTTTCTGATTTTGGTCTTTCAAAGACTTACCCAACAGATGACAACTCCTACATGAGCACTATTATTGTTGGCACTCCGGGTTATCTTGATCCAGAGTAA 3582 41.79 MAKTRTVIKTEVRGSLDMAIGRICCRDNSEVKGKLDNNKLQGSVPSELLKRVDDGSLSLSFQGNPNLVCTSDSCKSKKKTTSIVIPIVASVGGFIGIVVVSIIVLLIVKSRKKQQNKTAVPKVDPSGPSRPNDQLSDQFLETRRRQFTYSEVLRMTNHFERVLGKGGFGIVYYGTIDNTQVAVKMLSQASGLGYQQFQAEVTLLLRVHHKNLTSLVGYMNEGDRLGLIYEFMAKGNLAEHLSEKSSHVLSWQDRLRIALDAAQGLEYLHDGCKPPIIHRDVKTTNILLTENFQAKLADFGLSKSFQTEGNNTHMSTVVAGTIGYLDPEYYKSNRLTEKSDVFSFGVVLLEIVSCKPVRPLTESEAHIIKWVNSMAARGDINGIIDRRLDSNYEVNSVWKAVEVAITCVSENPGRRPTMNQVVAELKNCLAIELERIRENQALNSTDSSMNTMNLGNNKLSGPIPAELLKRSNDGSLSLSVGGNQNLEGCASDPCPKNEEKKNNIIIPIVASIGGFLVVVTIVAITFWIIKSRKKQQGKNVVSVVDKSETNSPLGTSLEVRSRQFTYSEVVKMTNNFKKVLGKGGFGEVYYGVIDEIEVAVKMLSLSSSQGYRQFQAEVTLLMRVHHRNLTSLVGYLNEENHLGLIYEYMANGDLAEHLSERSVRIISWEDRLRIAMDAAQGLEYLHYGCKPPIVHRDVKTTNILLTDNFQGKLADFGLSKSFPTDGNTHMSTVVAGTPGYLDPEYYVSNRLTEKSDVYSFGIALLEIISCKPVISRTGDTPHIAKWVTSLLALGDIQSIVDPRLEGQYERNSVWKTVEVAMACVAANSSRRPTMSDVVAELKDCLATALSRNHENGSLESTNFAETRSISIGINASNSSPVARNLENNNLTGSLPPELKNRQKNGLTIRKATIIIPAVASVGGLLAFLIIAVIVYWIAKSNKKQQGDDVALIGNPTKAYTQLGSSLETRRRQFTFAEVVMITNNFEKVLGKGGFGMVYYGVLDDTQVAVKMISPSAVQGYSQFQAEVTILMRVHHRNLTNLVGYMNDGGHLGLIYEYMAKGNLAEHLSGNLLALATRYMLQHMLHNPIYEMKINQNRKLKHTFCLSNTEKSTSILSWEDRLRIAIDAAQGLEYLHHGCKPPIVHRDVKTTNILLTEKLNAKLSDFGLSKTYPTDDNSYMSTIIVGTPGYLDPE* 1194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26729055 26750304 - Chy1G022330.1 Chy01g02233 219414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02233 1193 Gene3D Transferase(Phosphotransferase) domain 1 1096 1193 - -
Chy01g02233 1193 Gene3D Transferase(Phosphotransferase) domain 1 649 866 - -
Chy01g02233 1193 Gene3D Transferase(Phosphotransferase) domain 1 232 451 - -
Chy01g02233 1193 ProSiteProfiles Protein kinase domain profile. 157 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02233 1193 PANTHER OS07G0107800 PROTEIN-RELATED 447 883 - -
Chy01g02233 1193 PANTHER OS07G0107800 PROTEIN-RELATED 884 1070 - -
Chy01g02233 1193 PANTHER OS07G0107800 PROTEIN-RELATED 1108 1193 - -
Chy01g02233 1193 ProSiteProfiles Protein kinase domain profile. 983 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02233 1193 ProSiteProfiles Protein kinase domain profile. 574 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02233 1193 CDD STKc_IRAK 163 427 - -
Chy01g02233 1193 Gene3D Phosphorylase Kinase; domain 1 970 1057 - -
Chy01g02233 1193 Gene3D Phosphorylase Kinase; domain 1 561 648 - -
Chy01g02233 1193 ProSitePatterns Protein kinases ATP-binding region signature. 989 1010 IPR017441 GO:0005524
Chy01g02233 1193 Pfam Protein tyrosine and serine/threonine kinase 158 425 IPR001245 GO:0004672|GO:0006468
Chy01g02233 1193 Pfam Protein tyrosine and serine/threonine kinase 985 1180 IPR001245 GO:0004672|GO:0006468
Chy01g02233 1193 Pfam Protein tyrosine and serine/threonine kinase 576 841 IPR001245 GO:0004672|GO:0006468
Chy01g02233 1193 ProSitePatterns Protein kinases ATP-binding region signature. 580 601 IPR017441 GO:0005524
Chy01g02233 1193 PANTHER OS07G0107800 PROTEIN-RELATED 34 446 - -
Chy01g02233 1193 PANTHER PUTATIVE-RELATED 1108 1193 - -
Chy01g02233 1193 SMART serkin_6 574 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02233 1193 SMART serkin_6 157 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02233 1193 SUPERFAMILY Protein kinase-like (PK-like) 551 841 IPR011009 -
Chy01g02233 1193 PANTHER PUTATIVE-RELATED 447 883 - -
Chy01g02233 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Chy01g02233 1193 PANTHER PUTATIVE-RELATED 34 446 - -
Chy01g02233 1193 PANTHER PUTATIVE-RELATED 884 1070 - -
Chy01g02233 1193 ProSitePatterns Protein kinases ATP-binding region signature. 163 184 IPR017441 GO:0005524
Chy01g02233 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1142 1154 IPR008271 GO:0004672|GO:0006468
Chy01g02233 1193 MobiDBLite consensus disorder prediction 117 137 - -
Chy01g02233 1193 Gene3D Phosphorylase Kinase; domain 1 139 231 - -
Chy01g02233 1193 SUPERFAMILY Protein kinase-like (PK-like) 966 1193 IPR011009 -
Chy01g02233 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Chy01g02233 1193 SUPERFAMILY Protein kinase-like (PK-like) 133 425 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02231 Chy-Chr1:26717543 Chy01g02233 Chy-Chr1:26729055 1.76E-71 dispersed
Chy01g02233 Chy-Chr1:26729055 Chy07g00522 Chy-Chr7:4244476 2.63E-71 dispersed
Chy01g02237 Chy-Chr1:26760866 Chy01g02233 Chy-Chr1:26729055 3.62E-21 dispersed
Chy04g00619 Chy-Chr4:7026489 Chy01g02233 Chy-Chr1:26729055 7.48E-17 dispersed
Chy01g02232 Chy-Chr1:26728598 Chy01g02233 Chy-Chr1:26729055 2.91E-38 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71017 PF07714 PK_Tyr_Ser-Thr 1.80E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02233 - - csv:101206211 835.484