Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02239 ATGAAAGTTCTTTTGGTTAAACCTGATATGCCTTTTGCTTGTGTAAGTATTGGTGAAAATCCAGATCTTTGTACATCACTTAAATGCGATAACAAGAAGAAAAAGTACTTGGTTCTTATAATTCTCTCAACTATTATAGCTGTGCTTTTACCTACCCTAGTGGTTACTCTTGTGCTCTACAAAAGAAGAAAACAAAGAGAACATCTCAAAAGATCAATCCAAGAAAGATTGCTTAATTCAAAGAACCAACAGGTTCACTACTCTGAGATATTGGTTATAACAGATAACTTGAAAACTTCTATAGGAGAAGGAGGATTTGGAAAAGTATATTTGGGTGTACTGAGTGACAAAATTCAAGTTGCTGTCAAGTTGCTGTCTGCATCGTCACGGCAAGGCACTAAAGAATTCAAAGCAGAGGCTGAAATATTGACCATTGTTCATCACAGAAATTTGGTTTCGCTCATTGGTTACTGTGATGAGACTGAGAATAAGGCTCTCATTTATGAATTTATGGCTAATGGAAATCTACGCAAACATCTCTCTGATTCAAGTACGACAGTTCTGAATTGGAAGCAAAGACTCCAAATTGCACTTGATGCAGCACAAGGGTTGGAATATTTGCACAATTGTTGCAAGCCACCTATACTTCACAGAGATATGAAGACTTCAAATATCTTATTGAATGAAAAAATGCAGGCTAAAATATCAGATTTTGGACTCTCCAGGATATTTGCAAATGAAAACGATACTCATTTGGCCACTCGCCCTGCTGGCACCTTTGGATATGTTGATCCCACTTATTTAACCAGAAACAGGTTCACAGGCTTAATTCCCAAGGCTCTCTTGCAAAGGGCTGAAGCTGGATTACTTGCATTGAGTGTGGGTGAAAATCCAGATCTTTGTACATCAGTTGAATGTGTTAACAAGAGGAAGAATAAAAAGAGGAAGAAGTACTTGGTTGCTATAATTCTCTCCAGTGTTGTAGCTGTGCTCCTACCTATCCTTATGGTTACTCTGGTAATCTACAAAAGGAGAAAACAAAGAGAGAATCTCAAAAGATCAATTCAAGAAAGGTTACTTAAGTCGAAGAACCAACTGGTTCAATTCTCCGAGATATTGGTTATCACAGATAACTTGAAGACAAGTATTGGGGAAGGAGGTTTTGGAAAAGTATACTTGGGTGTACTGAGCGATAAAACCCAAGTTGCTGTCAAGTTGATGTCTTCAATGTCACATCAAGGCTACAATGAATTCAGAGCTGAGGCTCAAATATTAACAGTTGTTCATCATATAAATCTGGTTTCTCTTATTGGTTACTGTGATGAGGCTGAGAACAAGGCACTCCTTTATGAATTCATGGGTAACGGAAGTTTACGCGATTTTCTATCTGATTCAAGCACGAAGGTCTTGAATTGGAAAGAAAGACTCCAAATTGCAGTTGATGCAGCTCAAGGGTTGGAATATTTACACAATGGTTGTGTGCCACCTATAATTCACAGAGATGTGAAGTCTTCCAATATCCTCTTGAATGAACAAATGCAAGCTAAAATATCAGATTTTGGACTATCTAGGGTGTTTGTAAATGAAAGTGATACTCATTTCTCCACTTGTCCTGCTGGCACCTTCGGATATCTCGACCCAACGGTTCATTTATCAAGAAACTTCATCAAGAAAAGTGATGTTTACAGCTTTGGGATTGTGTTGTTTGAGCTGATAACTGGGCGTCCAGCCATAATCAAGAGCTCTGAAGACAACATCCACATAGTTGATTGGGTTAAGCCACAGATTACAGTAGGCAACATCCAAAACATTGTTGATCCAAGGTTAGAAAGCTGCATAGATAGTCGTTGTGCAAGTAAATTTGTGGAGCTTGCTCTGTCTTGCACATTGCCAACTTCAGCAGGAAGGCCTGAGATGAGTGGAGTGGTTTTACAACTCATAGAATGTTTGAAAATGGTTCAAGATACAACCCCACAAATGTCAAATAACAATGCTGAGAACTTTTCACACAATTCCATTGGCTCTTCATCCCTTCCTAGTCCTAGATAG 2049 38.56 MKVLLVKPDMPFACVSIGENPDLCTSLKCDNKKKKYLVLIILSTIIAVLLPTLVVTLVLYKRRKQREHLKRSIQERLLNSKNQQVHYSEILVITDNLKTSIGEGGFGKVYLGVLSDKIQVAVKLLSASSRQGTKEFKAEAEILTIVHHRNLVSLIGYCDETENKALIYEFMANGNLRKHLSDSSTTVLNWKQRLQIALDAAQGLEYLHNCCKPPILHRDMKTSNILLNEKMQAKISDFGLSRIFANENDTHLATRPAGTFGYVDPTYLTRNRFTGLIPKALLQRAEAGLLALSVGENPDLCTSVECVNKRKNKKRKKYLVAIILSSVVAVLLPILMVTLVIYKRRKQRENLKRSIQERLLKSKNQLVQFSEILVITDNLKTSIGEGGFGKVYLGVLSDKTQVAVKLMSSMSHQGYNEFRAEAQILTVVHHINLVSLIGYCDEAENKALLYEFMGNGSLRDFLSDSSTKVLNWKERLQIAVDAAQGLEYLHNGCVPPIIHRDVKSSNILLNEQMQAKISDFGLSRVFVNESDTHFSTCPAGTFGYLDPTVHLSRNFIKKSDVYSFGIVLFELITGRPAIIKSSEDNIHIVDWVKPQITVGNIQNIVDPRLESCIDSRCASKFVELALSCTLPTSAGRPEMSGVVLQLIECLKMVQDTTPQMSNNNAENFSHNSIGSSSLPSPR* 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26772826 26781020 + Chy1G022390.1 Chy01g02239 219420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02239 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Chy01g02239 682 MobiDBLite consensus disorder prediction 660 682 - -
Chy01g02239 682 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 268 669 - -
Chy01g02239 682 Pfam Protein tyrosine and serine/threonine kinase 97 271 IPR001245 GO:0004672|GO:0006468
Chy01g02239 682 Pfam Protein tyrosine and serine/threonine kinase 379 645 IPR001245 GO:0004672|GO:0006468
Chy01g02239 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Chy01g02239 682 ProSitePatterns Protein kinases ATP-binding region signature. 101 123 IPR017441 GO:0005524
Chy01g02239 682 SMART serkin_6 95 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02239 682 SMART serkin_6 377 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02239 682 SUPERFAMILY Protein kinase-like (PK-like) 78 272 IPR011009 -
Chy01g02239 682 ProSiteProfiles Protein kinase domain profile. 377 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02239 682 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 16 267 - -
Chy01g02239 682 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Chy01g02239 682 PANTHER OS07G0107800 PROTEIN-RELATED 268 669 - -
Chy01g02239 682 PANTHER OS07G0107800 PROTEIN-RELATED 16 267 - -
Chy01g02239 682 ProSiteProfiles Protein kinase domain profile. 95 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g02239 682 SUPERFAMILY Protein kinase-like (PK-like) 360 646 IPR011009 -
Chy01g02239 682 Gene3D Transferase(Phosphotransferase) domain 1 454 674 - -
Chy01g02239 682 Gene3D Transferase(Phosphotransferase) domain 1 172 277 - -
Chy01g02239 682 Gene3D Phosphorylase Kinase; domain 1 101 171 - -
Chy01g02239 682 Gene3D Phosphorylase Kinase; domain 1 383 453 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02239 Chy-Chr1:26772826 Chy01g02228 Chy-Chr1:26698708 7.06E-70 dispersed
Chy01g02238 Chy-Chr1:26763373 Chy01g02239 Chy-Chr1:26772826 3.20E-140 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71021 PF07714 PK_Tyr_Ser-Thr 2.40E-48 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02239 - - csv:105436219 782.326