Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g02265 ATGGCTATGTCCTGCAAGGATGGTAACAAACATGGTATCGACAACGGCAAATACGTTCGGTACACACCGGAGCAGGTTGAAGCCCTTGAGCGGCTTTATCACGAATGTCCAAAACCCAGTTCCATTCGTCGTCAGCAGCTTATCAGAGAGTGCCCCATTCTCTCTAATATCGAGCCTAAGCAAATCAAAGTCTGGTTTCAAAATAGAAGATGTCGTGAAAAACAGAGGAAAGAGGCGTCACGGCTACAAGCTGTGAACAGGAAGCTTACGGCTATGAACAAGCTTTTAATGGAGGAGAATGATAGGCTGCAGAAGCAGGTTTCGCAGCTGGTGTATGAGAATGGCTATTTCCGCCAGCATACTCAGAGTACAACGCTTGGAGCTAAAGACACAAGTTGTGAACCGGTGGTAACAAGCGGTCAACACAATTTGACATCTCAGCATCCTCCGAGGGATGCTAGCCCTGCAGGACTTTTGTCTATTGCAGAAGAGACTTTAACAGAGTTTCTTTCAAAGGCTACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCCCTGGTGTGGCTGCACGTGCCTGCGGCCTGGTGGGTCTAGAACCTACTAGAGTTGCTGAAATCCTCAAGGATCAGCCGTCGTGGTTTCGCGATTGCCGAGCCGTGGATGTTCTTAATGTGCTGCCAACAGCAAATGGTGGAACCATTGAGCTGCTTTATATGCAGCTCTATGCGCCTACAACATTGGCGCCTGCACGAGACTTCTGGTTGTTACGTTACACTTCTGTTTTGGAAGATGGTAGCCTTGTGATCTGTGAGAGATCACTTAAGAACACTCAGAATGGCCCAACCATGCCTCCAGTGCAGCATTTTGTTAGAGCAGAGATGTTGCCGAGTGGATATCTGATAAGACCATGTGAAGGAGGTGGTTCTATCATTCATATCGTTGATCATATGGATCTGGAGCCATGGAGTGTTCCAGAAGTTTTGCGCCCGTTGTATGAATCATCCACTATTCTTTCTCAAAAGATGACTATGGCGGCTCTACGCCAGTTGAGGCAGATAGCTCATGAAGTTTCACAGTCAAATGTAACAGGCTGGGGTAGACGCCCTGCAGCTCTCCGTTCGCTTGGTCAGAGGCTTACCCGGGGTTTTAATGAGGCACTTAATGGGTTTAATGACGAAGGGTGGTCTGTGATGGGAAATGATGGAATGGATGATGTAACTATTCTCATGAATTCGTCTCCTGACAAGCTGATGGGATTGAACATATCATTTGCAAATGGATTTTCTGCCATCAGTAATGCAGTTTTATGTGCTCGAGCATCGATGCTGTTGCAGAATGTGCCTCCTGCAATTCTACTGAGGTTTCTGCGGGAGCACAGGTCAGAATGGGCAGACAACAATATTGATGCTTATTCAGCTGCTGCTGTCAAGGTTGGCCCATGGAGCTTACCGGGGTCTAGAGTTGGAAGTTTTGGGAATCAAGTAATACTTCCTCTGGCTCATACCATTGAGCACGAAGAGTTTCTAGAAGTGATTAAACTGGAAGGGATTGGCCATACTCCTGAGGATGCAATGATGCCTAGAGAAATGTTTCTGCTGCAACTCTGCAGTGGAATGGATGAAAATGCTATTGGCACTTGTGCTGAACTAATATTTGCTCCAATTGATGCCTCTTTTGCTGATGACGCCCCTCTTTTGCCCTCGGGGTTTCGGATCATACCACTTGACTCTGGAAAGGAAGCATCCAGCCCAAATCGCACACTAGACCTTGCATCTGCTCTTGAAATTGGCCCTGCTGGAAATAGAACACCAAATGACTCTGTAAATTCTGGTTGTACAAGGTCTGTAATGACGATTGCATTTGAATTTGCATTTGAGAGCCACATGCAAGAGCATGTGGCATCGATGGCTCGACAATATGTACGTAGTATTATATCATCGGTTCAGAGGGTTGCATTAGCTCTCTCACCTTCTCATTTAAGTTCACATACTGGACTACGATCTCCACTTGGTACTCCTGAAGCACAGACACTTGCTCGTTGGATTTGCAACAGTTATAGGTGCTACTTGGGGGTGGAGCTGTTAAAATCTGGAAATGAAGGAGGCGAGCTTGTGCTGAAAACATTGTGGCATCATTCGGATGCAATTATGTGCTGCTCTCTAAAGGCATTGCCAGTGTTCACTTTCGCAAATCAGGCAGGCCTTGACATGCTTGAGACAACCTTAGTTGCACTTCAAGACATAACTTTGGAAAAGATATTTGATGACCATGGAAAAAAGACACTCTGCTCAGAATTTCCACAGATAATGCAACAGGGATTTGCTTGTCTTCAAGGAGGCATATGCCTTTCGAGCATGGGTCGACCTGTCTCGTACGAAAGAGCTGTGGCTTGGAAGGTGCTGAATGAAGAGGAAAATGCACACTGCATCTGTTTTATGTTTGTGAACTGGTCCTTTGTCTGA 2514 46.38 MAMSCKDGNKHGIDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLGAKDTSCEPVVTSGQHNLTSQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDQPSWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTILSQKMTMAALRQLRQIAHEVSQSNVTGWGRRPAALRSLGQRLTRGFNEALNGFNDEGWSVMGNDGMDDVTILMNSSPDKLMGLNISFANGFSAISNAVLCARASMLLQNVPPAILLRFLREHRSEWADNNIDAYSAAAVKVGPWSLPGSRVGSFGNQVILPLAHTIEHEEFLEVIKLEGIGHTPEDAMMPREMFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALEIGPAGNRTPNDSVNSGCTRSVMTIAFEFAFESHMQEHVASMARQYVRSIISSVQRVALALSPSHLSSHTGLRSPLGTPEAQTLARWICNSYRCYLGVELLKSGNEGGELVLKTLWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGKKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFMFVNWSFV* 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27073809 27079572 + Chy1G022650.1 Chy01g02265 219446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g02265 837 ProSiteProfiles START domain profile. 151 379 IPR002913 GO:0008289
Chy01g02265 837 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
Chy01g02265 837 MobiDBLite consensus disorder prediction 128 154 - -
Chy01g02265 837 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 837 IPR044830 GO:0003700
Chy01g02265 837 SUPERFAMILY Homeodomain-like 16 80 IPR009057 -
Chy01g02265 837 Pfam MEKHLA domain 694 836 IPR013978 -
Chy01g02265 837 Gene3D - 195 379 IPR023393 -
Chy01g02265 837 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 837 - -
Chy01g02265 837 SMART START_1 160 370 IPR002913 GO:0008289
Chy01g02265 837 Gene3D - 10 83 - -
Chy01g02265 837 SMART HOX_1 14 80 IPR001356 GO:0003677
Chy01g02265 837 CDD START_ArGLABRA2_like 155 371 - -
Chy01g02265 837 SUPERFAMILY Bet v1-like 160 371 - -
Chy01g02265 837 MobiDBLite consensus disorder prediction 128 150 - -
Chy01g02265 837 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Chy01g02265 837 CDD bZIP 69 108 - -
Chy01g02265 837 Pfam START domain 161 369 IPR002913 GO:0008289
Chy01g02265 837 CDD homeodomain 17 77 IPR001356 GO:0003677
Chy01g02265 837 Coils Coil 72 113 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02265 Chy-Chr1:27073809 Chy04g00157 Chy-Chr4:1390214 0 dispersed
Chy01g02265 Chy-Chr1:27073809 Chy02g00094 Chy-Chr2:600150 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17397 PF01852 START 7.60E-54 CL0209 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g02265 K09338 - csv:101213106 1684.46