Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00046 ATGGGGAAGAAGAAGAAGAGAGTTTCGTCTAAGGTATGGTGCTACTATTGCGATAGAGAATTCGATGACGAGAAGATATTGGTTCAGCATCAGAAGGCTAAACACTTCAAGTGCCATGTCTGTCACAAGAAGCTTTCTACTGCCGGCGGTATGGTCATCCACGTTCTTCAGGTCCACAAAGAGTCAGTCACCAAAGTTCCTAATGCAAAACCAGGCAGAGAAGCAACAGATATTGAAATCTATGGAATGCAAGGAATTCCTCCTGATGTTTTGGCAGCACACTATGGAGAGGAGGAAGAAGAGTCCTTGTCAAAGGTGGCCAAAGTGGAGATGCCATCAACGCAGATGGTTGGAGGTGTGGTGCCCGGATCGCTGGGTATAATGTACCCTCCTCAGCCTGGTTTAGCTGCAATGCAACCTATTTATCCTTCGACTGGACAAGCGCAGCCTACTGCCTGGCCTGTTCCACCGCGTCCCCAACCTTGGTTCCCTCCAAATTCAGCTGTTTCAATTCCTCCTCCTGCCCAATTGGGCTATGCTCAGCAGCCCCTATTTCCTGTGCAGACTGCAAGGCCTCCACTTCCAGTATCATCAACTCCTATGCTCCAGCCTTTACAGATAACGCCTCCTGGATTGACTTCAACTACACCTACAGCTTCTGTATCTCAACCGTTGTTCCCTGTTGTTAGTAATAGCCATGGACCTACCCAAAGCTCTCCTTTTTCTTCATCTACACTTTCAGCAAGCATTCCTTTGACCTCGGCAGCAGATATAAAGGGCTCAGTGACACATCTCGGTACCAACTTTTCTACAATTGGAAATCAAGTTGCAAACATTCCAGGTGGAATATTAAGCAATTCACACTCCTATGCTTCGGGACCAAATACAGGTGGTCCTTCTATCGGACCACCTCCTGTAATTGCAAATAAAGCTCCTACTCAACCATCAACAAATGAAGTATATTTGGTTTGGGATGATGAGGCAATGTCTATGGAGGAGAGAAGAATGTCCTTAACTAAGTATCAGGTGCATGATGAAACTAGCCAGATGAGTTCAATTGATGCAGCCATAGACAAACGAATCTTGGAAAGCAGGCTTGCCGGCCGAATGCCATTTTAG 1119 46.47 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKESVTKVPNAKPGREATDIEIYGMQGIPPDVLAAHYGEEEEESLSKVAKVEMPSTQMVGGVVPGSLGIMYPPQPGLAAMQPIYPSTGQAQPTAWPVPPRPQPWFPPNSAVSIPPPAQLGYAQQPLFPVQTARPPLPVSSTPMLQPLQITPPGLTSTTPTASVSQPLFPVVSNSHGPTQSSPFSSSTLSASIPLTSAADIKGSVTHLGTNFSTIGNQVANIPGGILSNSHSYASGPNTGGPSIGPPPVIANKAPTQPSTNEVYLVWDDEAMSMEERRMSLTKYQVHDETSQMSSIDAAIDKRILESRLAGRMPF* 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 326582 331136 + Chy2G023130.1 Chy02g00046 219494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00046 372 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Chy02g00046 372 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Chy02g00046 372 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 372 - -
Chy02g00046 372 PANTHER ZINC FINGER PROTEIN 207 1 372 - -
Chy02g00046 372 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Chy02g00046 372 Gene3D Classic Zinc Finger 1 66 - -
Chy02g00046 372 SMART c2h2final6 12 35 IPR013087 -
Chy02g00046 372 SMART c2h2final6 36 59 IPR013087 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17404 None None None None Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00046 - - csv:101206973 723.776