Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00061 ATGGATTCAGCAAGGAGTTGGTTTCAGAAGTTCCAAACTAGAGTAAAGAAGGAAACTGTAAGTGACAATGAGGCTCCGGATGTACCTTCAAGTGCGACGAAGCAGAAAGTTGAGGTTGCCAAGCAATATATCGAAAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGTTGGGTGTTGGAGAGAAGGCTTGCTGATGCGGATGCTTCTGAGGAAGACCAAATAAATGTTCTTAAATATTTAGAACAGAAGGAGACAGAATATATGCGCCTTCGTAGACATAAAATGGGTGTCGATGACTTTGAACTTTTGACAATTATAGGAAGGGGTGCATTTGGGGAGGTTAGACTTTGTAGAGAAAAAACCACAGGTCATGTATATGCAATGAAGAAGCTTAAGAAATCTGAGATGCTTCGCAGGGGGCAGGTGGAACATGTCAAAGCCGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTACATTGTGAAGTTATACTGCTCCTTTCAGGATGATGATTTTTTGTATCTTATTATGCAATATCTCCCTGGAGGTGATATGATGACCCTATTAATGCGCAAGGATATTTTGACAGAGAATGAGGCTAGATTTTATGTTGGGGAAACAGTCCTTGCTATAGAGTCCATTCACAAGCATAATTACATTCACAGAGACATCAAGCCTGATAATTTACTCCTTGATCGTTATGGCCACATTAAACTCTCAGATTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCTAATCTCACTGAGGAAGAAAAAGTAATGGTGAAGAATGTCAGAACTTCCACAGAAAATGATAGTCAAACTAGTGTATCAAAACGGACACAACAAGAACAATTGTTACATTGGCAAAAGAACAGACGAACATTGGCTTATTCAGCTGTTGGGACACCGGACTATATCGCCCCAGAAGTGTTATTGAGGAAAGGATATGGAATGGAGTGCGACTGGTGGTCTCTTGGTGCAATCATGTACGAAATGCTTGTGGGATTTCCACCTTTCTATTCTGATGATCCAATGTCTACATGTAGAAAGATTATTAACTGGAGAACACATTTGAGATTTCCTACAGAAGCAAAAATTTCCATTGAGGCCAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCAAAGGCTTGGAACCAAAGGAGCTAAAGAAATTAAGGCTCATCCATGGTTTAAAGGTACACAATGGGATAAATTATATCAAATGGAAGCTGTTATAATCCCAGAAATACAGGATGAGTTAGACACTCGAAATTTTGAGAAGTATGAAGAGCTGGGTGTGCCAGGGCAAACTACATCAAAGTCGGGCCCTTTGAGAAAGAAGCTTTCACCCAAGGACGTGAACTTTGTTGGTTACACATACAAGAATTTTGAAATTGTCAACGAACACCACTTGTCTGGCATTACTGAGATGAGGAAAAAGCCTATCAAGACCAAGAGACCATCTGTTACGACTCTATTTGCCAATGAAGATTCTTCCGAGCAGTCTGTTCAAAGAAGTCTTCCTAATCATTTGCCAACCCATCTTGAAGTCTCAGAAAGCCCCGATCCATCACCTCGTTCAACCGGATCACAGCAACAGCCGAAACGGTGGGGAAGATGA 1653 40.77 MDSARSWFQKFQTRVKKETVSDNEAPDVPSSATKQKVEVAKQYIENHYKSQMKSLQDRKERRWVLERRLADADASEEDQINVLKYLEQKETEYMRLRRHKMGVDDFELLTIIGRGAFGEVRLCREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDDDFLYLIMQYLPGGDMMTLLMRKDILTENEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLTEEEKVMVKNVRTSTENDSQTSVSKRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIMYEMLVGFPPFYSDDPMSTCRKIINWRTHLRFPTEAKISIEAKDLICKLLCNVEQRLGTKGAKEIKAHPWFKGTQWDKLYQMEAVIIPEIQDELDTRNFEKYEELGVPGQTTSKSGPLRKKLSPKDVNFVGYTYKNFEIVNEHHLSGITEMRKKPIKTKRPSVTTLFANEDSSEQSVQRSLPNHLPTHLEVSESPDPSPRSTGSQQQPKRWGR* 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 447668 453829 + Chy2G023280.1 Chy02g00061 219509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00061 550 ProSiteProfiles Protein kinase domain profile. 106 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00061 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Chy02g00061 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 510 - -
Chy02g00061 550 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Chy02g00061 550 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 28 510 - -
Chy02g00061 550 CDD STKc_NDR_like 104 472 - -
Chy02g00061 550 SMART pkinase_C_6 409 473 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy02g00061 550 SUPERFAMILY Protein kinase-like (PK-like) 87 454 IPR011009 -
Chy02g00061 550 MobiDBLite consensus disorder prediction 504 550 - -
Chy02g00061 550 Gene3D Transferase(Phosphotransferase) domain 1 190 256 - -
Chy02g00061 550 Gene3D Transferase(Phosphotransferase) domain 1 303 426 - -
Chy02g00061 550 Pfam Protein kinase domain 107 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00061 550 SMART serkin_6 106 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00061 550 Gene3D Phosphorylase Kinase; domain 1 427 437 - -
Chy02g00061 550 Gene3D Phosphorylase Kinase; domain 1 104 189 - -
Chy02g00061 550 MobiDBLite consensus disorder prediction 531 550 - -
Chy02g00061 550 MobiDBLite consensus disorder prediction 504 524 - -
Chy02g00061 550 ProSiteProfiles AGC-kinase C-terminal domain profile. 409 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00061 Chy-Chr2:447668 Chy05g00316 Chy-Chr5:3138712 0 dispersed
Chy02g00061 Chy-Chr2:447668 Chy07g00261 Chy-Chr7:2059432 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71024 PF00069 Pkinase 9.50E-65 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00061 K08790 - csv:101208438 1110.9