Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00078 ATGTTGGCGTCACTACCCAAGTCCCCTCCGTGTAGAAATAAAGAAATCGAGGAGATAACTACATTTATTGAAAGTGCTTTATGTGATGATCAATGCTTGGGTCGATGCTTGTACATCTATGGTGTTCCAGGAACAGGTAAGACAATGAGTGTGCTGTCGGTAATGAGAAACTTGCGGGCTAAAGTTGATGCAGGAAATCTAAGGCCTCATTGCTTTGTGGAGGTTAATGGTCTAAAGCTGGCAGCACCAGAAAATATATACAGGGCGCTTCAGTTGTTGACCAAACGGTTTTCAGGCGTAAATAGTTGCAGGGATGATGAGCGACCTTGCATTCTGCTCATTGATGAACTTGATCTTCTTGTAACAAGAAATCAGTCAATTCTATATAACATTCTTGATTGGCCTACAAAGCCACAAGCCAAGTTGATTGTCATAGGAATTGCAAATACCATGGACCTACCAGAGAAGTTGCTTCCTCGAATTTCAAGCCGAATGGGTATTGAAAGGCTTTGTTTTGGCCCCTATAACTATCAGCAACTTCAAGAAATCATTTTGAGCCGGCTTGAAGGAATCGATGCATTTGAGAAACAAGCTATTGAATTTGCATCGAGAAAGGTAGCTGCTATTTCAGGAGATGCACATCGTGCTTTGGAGATATGTAGGCGTGCAGCTGAAATTACGGATTATCATTTAAAGAAGCATCATATGAAGCAGCTGAGTTTGATTTCCAACACTGCGAAAACACAAGTTGGAATAGCCGAGGTGGAAACAGCGATCCAAGAAATGTTTCAAGCACCTCATATGCAAGTGATGAAGAGTTGTTCTAAGCAGGGGAAGATCTTCTTGACAGCCATGGTGCACGACTATTATAAAACAGGTTTAGGTGAAGCAACCTTTGAAAAGCTTGCCATGACGGTCTCAAATCTTTGTACAAGCAATGGAGAGGAATTTCCTGGATATGATGCTCTCTTGAAAGTTGGCTGTAGGCTTGGTGAGTGCAGAATTATTTTATGTGAATCAGGGGCTAAACACCGGTTGCAGAAGTTACAGCTTAATGTTCCAAGTGATGACGTCTCATTTGCACTGAAAGATAGTAAGGATATACCTTGGTTGGCTAAGTATCTTTAA 1128 41.58 MLASLPKSPPCRNKEIEEITTFIESALCDDQCLGRCLYIYGVPGTGKTMSVLSVMRNLRAKVDAGNLRPHCFVEVNGLKLAAPENIYRALQLLTKRFSGVNSCRDDERPCILLIDELDLLVTRNQSILYNILDWPTKPQAKLIVIGIANTMDLPEKLLPRISSRMGIERLCFGPYNYQQLQEIILSRLEGIDAFEKQAIEFASRKVAAISGDAHRALEICRRAAEITDYHLKKHHMKQLSLISNTAKTQVGIAEVETAIQEMFQAPHMQVMKSCSKQGKIFLTAMVHDYYKTGLGEATFEKLAMTVSNLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNVPSDDVSFALKDSKDIPWLAKYL* 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 527025 528198 - Chy2G023450.1 Chy02g00078 219526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00078 375 Gene3D - 2 170 IPR027417 -
Chy02g00078 375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 230 IPR027417 -
Chy02g00078 375 Pfam AAA lid domain 195 233 IPR041083 -
Chy02g00078 375 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 2 371 - -
Chy02g00078 375 Gene3D - 171 260 - -
Chy02g00078 375 SMART AAA_5 33 171 IPR003593 -
Chy02g00078 375 Pfam ATPase family associated with various cellular activities (AAA) 37 168 IPR003959 GO:0005524|GO:0016887
Chy02g00078 375 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 2 371 IPR020793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00078 Chy-Chr2:527025 Chy04g00760 Chy-Chr4:9669583 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00078 K02603 - csv:101214082 722.62