Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00083 ATGAACAACGAAGACGATGAACGAGATGGGGATGTGGAAGATGAGGGAGGCATTGCGCAAATAAGACGACGAGAGGTTACTTATGGATCTCATCTAGTACAAGGCAAAATGAATCATGGAATGGAGGACTATATCGTTACTGAGGATCGACTTGTCGACGACCATAAGCTAGGACTATTTGCAATATTTGATGGCCATTCAGGTCGCGATGTCGCAGAGTACTTGCAGAGCCATCTGTTTGATAACATCTTAAGCCAGTCTGATTTTTGGGAAGACCCTGATGGAGCAATCAGGAGGGCATATAAAGAAACAGATGAAGAGATTTTGGCTAAAAAGGTGAGAACGAGAGGAGGTTCAACAGCAGTCACTGCTATATTAATCGATGGGCAGACTCTAATTGTCGCTCACGTAGGCGACTCACGGGCGGTGATGTGCAGGAATGGTTCAGCGAAACCGATTACGGTTGATCACGATCCAGAGAAGGAGAAGGAGCTAGTTGAGAGCCGAGGTGGATTTGTTGTACGAATGCCAGGAAATGTGCCAAGGGTGGATGGTCAGCTAGCAATGTCAAGGGCATTTGGTGATGCTAAGCTGAAAGAACACATTACTTCAGAACCAGATATCAGGATCTTCGCTATTGAAAATGAGACTGAGTTCATCATTTTAGCCAGTGATGGCCTCTGGAAGGTAATATCAAACCAGGAAGCTTGTGATTGTATCAGAAAAATGGCTATGGATCCTCAAAAGGCTTCAGAGAAGTTGATCAAAGAGGCATTGTCTAAGATGAGCTACGATGACATTTCCTGCATTGTTGTTACCTTCCACTGA 828 44.69 MNNEDDERDGDVEDEGGIAQIRRREVTYGSHLVQGKMNHGMEDYIVTEDRLVDDHKLGLFAIFDGHSGRDVAEYLQSHLFDNILSQSDFWEDPDGAIRRAYKETDEEILAKKVRTRGGSTAVTAILIDGQTLIVAHVGDSRAVMCRNGSAKPITVDHDPEKEKELVESRGGFVVRMPGNVPRVDGQLAMSRAFGDAKLKEHITSEPDIRIFAIENETEFIILASDGLWKVISNQEACDCIRKMAMDPQKASEKLIKEALSKMSYDDISCIVVTFH* 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 534855 536197 + Chy2G023500.1 Chy02g00083 219531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00083 275 PANTHER ALPHABET, ISOFORM E-RELATED 20 275 - -
Chy02g00083 275 ProSiteProfiles PPM-type phosphatase domain profile. 27 274 IPR001932 -
Chy02g00083 275 SMART PP2C_SIG_2 42 274 IPR001932 -
Chy02g00083 275 CDD PP2Cc 28 274 IPR001932 -
Chy02g00083 275 Pfam Protein phosphatase 2C 37 266 IPR001932 -
Chy02g00083 275 SUPERFAMILY PP2C-like 26 275 IPR036457 -
Chy02g00083 275 Gene3D - 13 275 IPR036457 -
Chy02g00083 275 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 20 275 - -
Chy02g00083 275 SMART PP2C_4 23 272 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00083 Chy-Chr2:534855 Chy07g00063 Chy-Chr7:582051 2.68E-100 dispersed
Chy10g01167 Chy-Chr10:16522126 Chy02g00083 Chy-Chr2:534855 5.45E-26 dispersed
Chy02g00083 Chy-Chr2:534855 Chy04g00256 Chy-Chr4:2272719 5.60E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00083 - - csv:101211141 533.487