Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g00089 | ATGAATAATCGTGCAATGGAACTTGGGAGGCCTGGCTCAGGTGGTATCCTTACTGAATTCGAGAATCAAACTATATATGAACCGATTAAACTATCTTCTGCAAATGCATATATTGTATCTATTGTGGCCTTGAAAATAATGTTAGGCCTTTTCTGGTCATGTTCAGGCAAAAGAAGATTAAAGGATCTATTGCTTTTAAAGGATAATCGCTTTTGTGCAGATTGTCGCGCTGCAGATCCTAAATGGGCGTCAGCAAATATTGGAGTTTTTATATGCTTGAAATGTTGTGGCGTTCATAGAAGCCTCGGTTCACATATATCTAAGGTGTTATCAGTGACTCTGGATGAATGGAATGATGATGAAATTGATGCAATGATAGAAGTTGGAGGAAATTCTTCTGCAAATGCTATTTATGAAGCCTTTATTCCTGAGGGATTTTCAAAACCTGGACCTGATGCCACCCACGAACAACGTTCAAAATTTATTCGGTCCAAATATGAACTTCAAGAATTTCTGAAACCGAGCTTGAGAATTTTATCGTCCAACTCAGACAAAAGCAACATCCAAGCAAGCTTTTCTTCAAAGATCATGAACAGTTTTCGTTCGAATTCTTCACAAAAATCACAATCACAGCAAGGTATGGTAGAGTATATTGGATTATTGAAGGTCAAAGTGATTAAAGGGACAAACTTAGCTATCAGAGATATGATGTCGAGCGATCCTTATGTAGTCATGACTCTCGGTAAACAGACTGTCCAGACAAGTGTAGTCAGGAGCAACTTGAATCCTGTGTGGAATGAGGAACTAACACTATCTGTACCTCAAGGTTTTGGATCTATAAAGTTGGAAGTATACGACTATGACACATTTTCAGCCGACGACATAATGGGAGAAGCAGAGATTGATCTCCAACCCTTGATAACATCCGCAATGGCATTTGGAGATGCTGGAATGTTCTCAAACATGCAAATTGGTAAATGGCTGAAATCGCACGACAACGCTCTCATGAGCGATAGCACTGTTAATATTGTTGATGGAAAGGTGAAACAAGAGATAGCTCTCAAGCTTCAAAATGTGGAATCAGGTGAACTAGATCTAGAGCTAGAATGGATGGCTCTTGAACAATAG | 1128 | 39.18 | MNNRAMELGRPGSGGILTEFENQTIYEPIKLSSANAYIVSIVALKIMLGLFWSCSGKRRLKDLLLLKDNRFCADCRAADPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWNDDEIDAMIEVGGNSSANAIYEAFIPEGFSKPGPDATHEQRSKFIRSKYELQEFLKPSLRILSSNSDKSNIQASFSSKIMNSFRSNSSQKSQSQQGMVEYIGLLKVKVIKGTNLAIRDMMSSDPYVVMTLGKQTVQTSVVRSNLNPVWNEELTLSVPQGFGSIKLEVYDYDTFSADDIMGEAEIDLQPLITSAMAFGDAGMFSNMQIGKWLKSHDNALMSDSTVNIVDGKVKQEIALKLQNVESGELDLELEWMALEQ* | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 571771 | 574863 | - | Chy2G023560.1 | Chy02g00089 | 219537 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g00089 | 375 | ProSiteProfiles | C2 domain profile. | 201 | 316 | IPR000008 | - | |
Chy02g00089 | 375 | CDD | ArfGap | 69 | 166 | - | - | |
Chy02g00089 | 375 | CDD | C2_ArfGAP | 218 | 362 | - | - | |
Chy02g00089 | 375 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 57 | 185 | IPR001164 | GO:0005096 | |
Chy02g00089 | 375 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 | 53 | 375 | - | - | |
Chy02g00089 | 375 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 57 | 174 | IPR037278 | - | |
Chy02g00089 | 375 | SMART | arf_gap_3 | 57 | 179 | IPR001164 | GO:0005096 | |
Chy02g00089 | 375 | Pfam | C2 domain | 220 | 309 | IPR000008 | - | |
Chy02g00089 | 375 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 53 | 375 | IPR044518 | GO:0005096|GO:0005543 | |
Chy02g00089 | 375 | Pfam | Putative GTPase activating protein for Arf | 58 | 173 | IPR001164 | GO:0005096 | |
Chy02g00089 | 375 | PRINTS | HIV Rev interacting protein signature | 88 | 105 | IPR001164 | GO:0005096 | |
Chy02g00089 | 375 | PRINTS | HIV Rev interacting protein signature | 109 | 130 | IPR001164 | GO:0005096 | |
Chy02g00089 | 375 | PRINTS | HIV Rev interacting protein signature | 69 | 88 | IPR001164 | GO:0005096 | |
Chy02g00089 | 375 | SMART | C2_3c | 220 | 315 | IPR000008 | - | |
Chy02g00089 | 375 | Gene3D | C2 domain | 216 | 374 | IPR035892 | - | |
Chy02g00089 | 375 | Gene3D | Arf GTPase activating protein | 53 | 177 | IPR038508 | - | |
Chy02g00089 | 375 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 219 | 363 | IPR035892 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy02g00089 | Chy12g00386 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g00089 | Chy-Chr2:571771 | Chy10g01357 | Chy-Chr10:17812983 | 1.92E-114 | dispersed | |
Chy12g00386 | Chy-Chr12:4545430 | Chy02g00089 | Chy-Chr2:571771 | 1.80E-168 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g00089 | K12486 | - | csv:101218116 | 616.69 |