Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00094 ATGGCGTTAGTTATCCACAAAGATACATCAAGCAAACAAATGGATTCAAGCAAATACGTACGGTATACACCCGAGCAAGTTGAGGCATTAGAGAGAGTTTATGCCGAATGTCCAAAGCCTAGTTCTCTCAGAAGGCAGCAGCTCATTAGAGAGTGCCCAATCCTTTCTAACATTGAGCCTAAACAGATCAAAGTTTGGTTTCAAAATCGCAGATGCCGTGAGAAGCAGCGGAAGGAATCATCTCGCCTCCAGAGCGTAAACAGAAAGTTGTCTGCGATGAACAAATTGTTAATGGAGGAGAATGACCGTTTACAGAAACAGGTGTCCCATTTGGTCTATGAGAATGGCTTTATGCGCCAGCAACTGCATAGTGCATCTGGGACGACTACAGACAATAGCTGTGAGTCTGTAGTCATGAGCGGTCAGCCTCAACAACAGCAAAACCCAAATCCTCAGCATCCTAATAGGGATGCTAACAACCCAGCTGGTCTTCTCGCGGTAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACAGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAATTGCAGTGGGGTAGCAGCACGAGCCTGTGGTCTTGTTAGTCTAGAGCCGACAAAGGTTGCAGAAATTCTCAAAGATCGCCTTTCATGGTATCGTGACTGCCGCTGTCTTAATGTTTTAAGTGTAATTCCTACAGGAAATGGAGGAACAATAGAGCTCATATATATGCAGACTTATGCTCCAACGACATTAGCAGCAGCACGTGACTTCTGGACAATGAGATACACAACAAGTTTAGAAGATGGCAGTCTAGTGATACTTTATTTTGCATCTTCGTTTGAGAAATTCGAAGTTTTGATACTATTTCTTGATTCAGACAGCCTTTTTAAGGTTTGTGAGAGGTCATTATCTTCTTCAAGTGGTGGCCCTGCAGGGCCTCCGCCATCTACTTTTGTAAGAGCTGAGATGCTTCCTAGTGGCTATTTAATACGAGCGTGCGAGGGGGGTGGATCAATTATTCACATTGTCGATCACATTGATTTGGATGTTTGGAGTGTCCCTGAAGTTCTGAGGCCACTTTATGAGTCATCCAAGATCCTTGCTCAGAAAATAACAATCGCTGCATTGCGTCACATTAGACAAATTGCTCAAGAGACTAACGGAGAAATTCAATGTACTGGCGGACGTCAACCTGCTGTACTGCGGACATTTAGTCAAAAACTCTGCAGGGGTTTCAATGATGCTGTCAATGGGTTTGCTGATGACGGTTGGTCACCTATGGGAAGTGATGGTGTGGAGGATGTGACAATTCTCATAAATACATCAGCAAACAAGTTTTCTGGATCCCAGTATAACACGTCTTTGTATCCCTCTTTTGGTGGAGGAGTTATGTGTGCAAAGGCGTCAATGTTACTTCAGAATGTTCCCCCTGCTTTGCTTGTTCGATTCCTGAGAGAGCATCGGTCTGAATGGGCTGATTATGGAGTTGATGCCTACTCTGCTGCAAGTTTAAAAGCCAGTCCGTATGCTGTTCCATGTGCAAGGCCTGGTGGCTTCCCTAGTAGCCAGGTTATTCTGCCTCTTGCTACTACTGTGGAGCATGAGGAGTTTTTGGAGGTGGTTCGGCTGGAGGGCCTTGCATTCTCTCCTGAAGATGTTGCTTTGGCTGGACGAGATATGTACTTACTGCAGCTCTGCAGTGGGGTTGATGAGAATGCAGTTGGAGCTTGCGCTCAGCTTGTGTTTGCACCTATAGATGAATCTTTTGCTGATGATGCTCCACTACTTCCTTCAGGGTTCCGTGTCATACCGCTGGATCCGAAAACAGATGAACCTACTGCTGCTAGAACATTGGATTTAGCCTCTACCCTTGAAGTTGGTGCCAATGCTGCACGTTCTGCTGGTGAAACTGATTTTAGCAACTATAACCTTCGGTCAGTCCTGACTATCGCTTTCCAGTTCACCTTCGAGAATCACTTACAGGAAAACGTGGCTGCTATGGCTCGACAATATGTTCGTAGTGTTGTGGGCTCTGTTCAGAGGGTTGCCATGGCCATTTCCCCGTCGCGGTTGAGTTCCAATATGGGACTAAAGCCTCTTCCTGGTTCTCCTGAAGCTCTCACTTTGGCTCGATGGATTTGCCGAAGCTACAGGATCCATGTTGGAGCTGAGCTCCTTCAAGCTGATTCCCAGTCTGGAGATGCCACGTTGAAGCAGCTCTGGCACCACTCCGATGCAATCATGTGTTGCTCCGTTAAGACCAACGCATCTGCTGTGTTCACCTTTGCTAACCAGGCTGGTTTGGATATGCTTGAAACCACTCTTGTTGGCCTACAAGATATAATGCTAGACAAAATTCTTGATGAGGCGGGTCGGAAGATTCTCTGCACTGAATTCCCCAAAATAATGCAGCAGGGGTTTGCAAATCTTCCCTCTGGCATCTGCGTATCCAGTATGGGTCGTCCCATTTCTTATGAGCAAGCGGTTGCCTGGAAGGTTTTAAATGAGGATGATTCCAATCACTGTCTTGCTTTCATGTTCATAAACTGGTCCTTTGTTTGA 2619 46.43 MALVIHKDTSSKQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQSVNRKLSAMNKLLMEENDRLQKQVSHLVYENGFMRQQLHSASGTTTDNSCESVVMSGQPQQQQNPNPQHPNRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRLSWYRDCRCLNVLSVIPTGNGGTIELIYMQTYAPTTLAAARDFWTMRYTTSLEDGSLVILYFASSFEKFEVLILFLDSDSLFKVCERSLSSSSGGPAGPPPSTFVRAEMLPSGYLIRACEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKITIAALRHIRQIAQETNGEIQCTGGRQPAVLRTFSQKLCRGFNDAVNGFADDGWSPMGSDGVEDVTILINTSANKFSGSQYNTSLYPSFGGGVMCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLATTVEHEEFLEVVRLEGLAFSPEDVALAGRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLPSGFRVIPLDPKTDEPTAARTLDLASTLEVGANAARSAGETDFSNYNLRSVLTIAFQFTFENHLQENVAAMARQYVRSVVGSVQRVAMAISPSRLSSNMGLKPLPGSPEALTLARWICRSYRIHVGAELLQADSQSGDATLKQLWHHSDAIMCCSVKTNASAVFTFANQAGLDMLETTLVGLQDIMLDKILDEAGRKILCTEFPKIMQQGFANLPSGICVSSMGRPISYEQAVAWKVLNEDDSNHCLAFMFINWSFV* 873
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 600150 605325 + Chy2G023610.1 Chy02g00094 219542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00094 872 CDD homeodomain 18 78 IPR001356 GO:0003677
Chy02g00094 872 SMART START_1 166 401 IPR002913 GO:0008289
Chy02g00094 872 Coils Coil 83 107 - -
Chy02g00094 872 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Chy02g00094 872 SUPERFAMILY Homeodomain-like 18 79 IPR009057 -
Chy02g00094 872 Pfam MEKHLA domain 727 871 IPR013978 -
Chy02g00094 872 ProSiteProfiles START domain profile. 157 410 IPR002913 GO:0008289
Chy02g00094 872 CDD bZIP 70 109 - -
Chy02g00094 872 Gene3D - 200 409 IPR023393 -
Chy02g00094 872 Gene3D - 9 85 - -
Chy02g00094 872 Pfam START domain 167 399 IPR002913 GO:0008289
Chy02g00094 872 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Chy02g00094 872 SMART HOX_1 15 81 IPR001356 GO:0003677
Chy02g00094 872 MobiDBLite consensus disorder prediction 123 157 - -
Chy02g00094 872 SUPERFAMILY Bet v1-like 167 403 - -
Chy02g00094 872 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 292 - -
Chy02g00094 872 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 310 872 - -
Chy02g00094 872 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 292 IPR044830 GO:0003700
Chy02g00094 872 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 310 872 IPR044830 GO:0003700
Chy02g00094 872 MobiDBLite consensus disorder prediction 123 160 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g00094 Chy12g00385 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00094 Chy-Chr2:600150 Chy11g00810 Chy-Chr11:11625569 0 dispersed
Chy01g02265 Chy-Chr1:27073809 Chy02g00094 Chy-Chr2:600150 0 transposed
Chy04g00157 Chy-Chr4:1390214 Chy02g00094 Chy-Chr2:600150 0 transposed
Chy12g00385 Chy-Chr12:4527977 Chy02g00094 Chy-Chr2:600150 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17409 PF01852 START 8.90E-42 CL0209 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00094 K09338 - csv:101210154 1640.55