Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00122 ATGGCTTCCAGGTCCAGCGGTCATAGCAAAACGCGGGTCGGGAGATACGAGCTGGGACGAACCCTTGGAGAGGGCAGCTTCGCCAAGGTTAAGTTTGCTCGGAACTGCGAGACAGGGGAGAACGTAGCCATCAAAATCCTGGACAAAGAGAACATTCTCAAACACAAGATGATCGGGCAGATTAAACGTGAAATATCCACTATGAAACTCATTAAACATCCAAATGTCATTCGCATGTATGAGGTGATGGCTAGCAAGACCAAGATATATATTGTCTTGGAATTTGTAACGGGTGGAGAACTGTTTGACAAAATTTCATGTAAGGGGAGACTGAAAGAAGATGAAGCAAGAAAGTATTTTCAGCAGTTAATAAATGCAGTGGATTATTGTCATAGCAGAGGTGTTTGTCATCGAGACCTAAAGCCAGAGAATTTATTACTGGATGCTAGTGGTGTTCTAAAAGTTTCAGATTTCGGATTGAGTGCTCTACCTCAACAAGTTCGAGGCGATGGATTACTTCACACTACTTGTGGAACACCCAATTATGTTGCTCCAGAGGTTATCGACAATAAAGGGTACTTTGGAGCAAAGGCTGACCTATGGTCATGTGGGGTTATCCTTTTTGTCCTCATGGCAGGCTACTTGCCATTTGAAGAATCCAATCTCATGCAACTGTATAAAAAGATATTCAAGGCGGATTTCACATGTCCTCCATGGTTCTCCTCTAGTGCCAAGAAATTAATCAAGAGGATCCTGGATCCAAATCCATTAACTAGAATCACTATTGCTGAAGTCCTTGAGAATGATTGGTTTAAGAAAGGATACAAGGCACCCAGTTTCAAAAATGATGAAATCAGTCTTGATAACATTGATGACATCTTTAATGAATCAGAGGCTACCGATAGCCTTGTTGTTGAGAGGAGAGAAGATAGATCTGCATTACTTGCGTCACCTGTCACCATGAATGCATTTGAGCTTATCTCTAAATCTCGGGGCCTCAACCTTGCCACACTCTTTGAGAAGCAAATGGGCGTAATTAAACGTGAAACAAGATTCACATCCAATTGTCCAGCAGATGAAATCATTTCGAAGATCAAAAACACTGCTGTTCCTTTGGGTTTTGATGTGAAGATTAATAACTTCAAGATGAAGCTCCAAGGGGAAAAAACTGGACGCAAAGGTCATTTATCGGTTGCAACAGAGATTTTTCAGGTTGCTCCTTCGCTGCATATGGTGGAGCTTCGCAAAGCTGGAGGCGACACTTTAGAATTTCAAATGTTCTATAATAACCTCTCAACGGGGCTGAAAGATATTGTATGGAAATACGGAGACGAGGTGGAGCAGGAAAGTAAGGGTCTGAAAGGATGA 1368 42.11 MASRSSGHSKTRVGRYELGRTLGEGSFAKVKFARNCETGENVAIKILDKENILKHKMIGQIKREISTMKLIKHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKISCKGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDASGVLKVSDFGLSALPQQVRGDGLLHTTCGTPNYVAPEVIDNKGYFGAKADLWSCGVILFVLMAGYLPFEESNLMQLYKKIFKADFTCPPWFSSSAKKLIKRILDPNPLTRITIAEVLENDWFKKGYKAPSFKNDEISLDNIDDIFNESEATDSLVVERREDRSALLASPVTMNAFELISKSRGLNLATLFEKQMGVIKRETRFTSNCPADEIISKIKNTAVPLGFDVKINNFKMKLQGEKTGRKGHLSVATEIFQVAPSLHMVELRKAGGDTLEFQMFYNNLSTGLKDIVWKYGDEVEQESKGLKG* 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 884175 889596 - Chy2G023890.1 Chy02g00122 219570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00122 455 Gene3D Kinase associated domain 1, KA1 316 441 - -
Chy02g00122 455 CDD STKc_SnRK3 15 270 - -
Chy02g00122 455 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Chy02g00122 455 CDD CIPK_C 322 437 - -
Chy02g00122 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Chy02g00122 455 Pfam NAF domain 318 377 IPR004041 GO:0007165
Chy02g00122 455 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00122 455 Gene3D Transferase(Phosphotransferase) domain 1 96 279 - -
Chy02g00122 455 PANTHER SERINE/THREONINE KINASE 9 446 - -
Chy02g00122 455 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00122 455 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 446 - -
Chy02g00122 455 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Chy02g00122 455 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Chy02g00122 455 SUPERFAMILY Protein kinase-like (PK-like) 13 279 IPR011009 -
Chy02g00122 455 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g00122 Chy12g00355 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00122 Chy-Chr2:884175 Chy05g00039 Chy-Chr5:263124 0 dispersed
Chy02g02291 Chy-Chr2:26969689 Chy02g00122 Chy-Chr2:884175 1.78E-23 transposed
Chy12g00355 Chy-Chr12:3797110 Chy02g00122 Chy-Chr2:884175 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71025 PF00069 Pkinase 3.60E-75 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00122 - - csv:101214052 897.886