Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00167 ATGGCTGCTTCTACAATGGCTCTTTCCTCCCCAACTCTGGCCGGCCAAGCCGTGAAACTTTCCCCCAATGCCCCTGAACTTCAGGGCAATGCAAAATTCACCATGAGGAAGACTGCCAGCAAGTCAGTTTCCTCCGGCAGCCCGTGGTATGGTCCTGACCGTGTCAAGTACTTGGGCCCATTCTCTGGCGAGCCACCGTCCTACCTTACTGGAGAGTTCCCTGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCTGATCCCGAGACCTTCGCCAAGAACCGTGAGTTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGGTGTGTCTTCCCTGAGCTTTTGTCTCGCAATGGTGTGAAGTTTGGTGAAGCTGTCTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGGCTTGACTACTTGGGCAACCCCAGCTTGGTCCATGCTCAGAGCATTTTGGCCATCTGGGCTTGCCAGGTTGTGTTGATGGGTGCCGTCGAGGGTTACCGTATTGCTGGCGGCCCACTCGGAGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTTGACCCATTGGGTTTGGCTGATGACCCAGAGGCCTTCGCTGAGTTGAAGGTTAAGGAGCTCAAGAATGGAAGGGAGGATGAAATGTCCCGTCCAGTGTCCACAAATATGATGTTATCAGTTGACCAATTCAGAGGTTTAATGGAAGCATATAGCTTAAAAGCATATGATTGA 753 53.25 MAASTMALSSPTLAGQAVKLSPNAPELQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGREDEMSRPVSTNMMLSVDQFRGLMEAYSLKAYD* 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1173807 1175516 + Chy2G024340.1 Chy02g00167 219615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00167 250 Gene3D Chlorophyll a/b binding protein domain 56 219 - -
Chy02g00167 250 Pfam Chlorophyll A-B binding protein 65 218 IPR022796 -
Chy02g00167 250 SUPERFAMILY Chlorophyll a-b binding protein 48 218 - -
Chy02g00167 250 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 219 IPR001344 GO:0009765|GO:0016020
Chy02g00167 250 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00167 Chy-Chr2:1173807 Chy11g01011 Chy-Chr11:14276644 2.38E-148 dispersed
Chy02g00166 Chy-Chr2:1171702 Chy02g00167 Chy-Chr2:1173807 2.73E-160 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00167 K08912 - csv:101221671 447.203