Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00170 ATGTCGGATGAAATGTTTAAAGATTTATTTTATGGTGGGATGGATGAGTATGAGTCTATAGTGAGAGCTTTTGGAATAACATCGGATTTTTCAAATAACAATAATGAAATTTCGGGGACGACTGCGATGAATTCTTCTTGTTCGTTGTCATCTTCGGATGCTGGAGGAGGCGAGGAGGATGATTCTGTGAAAGAGAAGGAGAAACAGATCAGTAAAGATGTTGTGGAAGATAACGGGGGGGAGAGTTCCAAGGCAACTGGATCGGGTAAATCGAAGAAGAAAGGAGAGAAAAAAGAGAGAGAAACGAGAGTCGCTTTCATGACCAAGAGCGAGGTTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGACAGAAGGCTGTCAAGAACAGTGCTTATCCCAGGAGCTATTACAGATGCACAACTCAAAAATGTGGAGTGAAAAAACGAGTAGAGAGATCCTACGAAGATCCATCCATTGTAATTACAACCTACGAAGGTCAACACAACCACCCAATTCCGGCGACTTTAAGGGGGAACCTATCGGTGGCGAGCGGGACATTTCCGCCGTCCATGCTGACGCCAATGCCGGTGGTCGGTGGCGTTGGGTTTCTACCTGCAGAACTATTGAGCAATGCAAGCAACAACCAAGCCGTCGGTGGCGGTGCCACAGTTTATTCACAGAACAGCTTCGACTATACTTATAACGGTCGACAACCGGAATACGGGCTTTTGCAGGATATTTTTCCGGCTCCGTCGTCGTTTTTCAACCGACAGCCGTGA 786 45.67 MSDEMFKDLFYGGMDEYESIVRAFGITSDFSNNNNEISGTTAMNSSCSLSSSDAGGGEEDDSVKEKEKQISKDVVEDNGGESSKATGSGKSKKKGEKKERETRVAFMTKSEVDHLEDGYRWRKYGQKAVKNSAYPRSYYRCTTQKCGVKKRVERSYEDPSIVITTYEGQHNHPIPATLRGNLSVASGTFPPSMLTPMPVVGGVGFLPAELLSNASNNQAVGGGATVYSQNSFDYTYNGRQPEYGLLQDIFPAPSSFFNRQP* 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1195290 1197047 - Chy2G024370.1 Chy02g00170 219618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00170 261 MobiDBLite consensus disorder prediction 31 102 - -
Chy02g00170 261 MobiDBLite consensus disorder prediction 31 55 - -
Chy02g00170 261 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 29 252 IPR044810 GO:0003700
Chy02g00170 261 SMART WRKY_cls 115 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g00170 261 Gene3D WRKY domain 100 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g00170 261 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 29 252 - -
Chy02g00170 261 Pfam WRKY DNA -binding domain 116 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g00170 261 MobiDBLite consensus disorder prediction 87 102 - -
Chy02g00170 261 SUPERFAMILY WRKY DNA-binding domain 107 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g00170 261 MobiDBLite consensus disorder prediction 57 79 - -
Chy02g00170 261 ProSiteProfiles WRKY domain profile. 110 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00888 Chy-Chr1:8099252 Chy02g00170 Chy-Chr2:1195290 4.17E-58 dispersed
Chy02g00170 Chy-Chr2:1195290 Chy03g00701 Chy-Chr3:9543590 4.39E-45 dispersed
Chy11g01009 Chy-Chr11:14264192 Chy02g00170 Chy-Chr2:1195290 3.35E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17416 PF03106 WRKY 1.50E-25 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00170 - - cmo:103484390 476.092