Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00171 ATGGAGAAGGAGCCTCTTCTTCCATATCTAAGCCCAAGAGGGAAACCTTCTCCCCTACCTCCTCAATTATGTCCACTTCCTGAAAACGATGAAATTACTCTGCCTATGACACCCACGGAGTTCAAAGACCGCTTGATCTTTGGTCCTTCATCGTCCCCACAAGACTCTTCTCCTATATTCGACGCTTTGACGCTATCTCTTTCCTCTTCGAGACCTTCTGCTTCATCTTCTCTTCAAGACCCATCTACACCTTTGGACCCAAGATCACAACCGCAGTCTCAACAGGCGTGGCTTGTGGATTCCAATTACACATGGCCCAAAAGCAACCTCCATCGCTCCAAAACTGCACCTGCCATGGCGGTCATCAACGATGTCAATCATTCGCAGGAGCCCAAGCCACAATTTGGTAAACAGTCTATTATCCGCCAAGCGGTTGTTCTTCTAATTGTTTACTTATCATTGGGTGTGCTTATCTATTGGTTAAATCGTGATAATTTTGCGGCTCAAGAGACTCATCCTGTGGTCGATGCATTGTACTTTTGTATTGTAACGATGTGCACTATTGGGTATGGAGATATTACCCCCAATAGTACGGCGACAAAGCTGTTCTCAGTATTGTTTGTGTTGGTGGGATTTGGGTTTATAGATATATTGCTCTCTGGAATGGTTAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTGAGGAATGTAAAGAGGGGGGTGAAGCGTGAATCTGGGAAGTCCTATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAGGTGGCATTGGCCTTAGGTGTTGTGATCCTTTGTATAGGAGTTGGCATGGGTGTTATGCATTTTGTTGAGAACCTGGGATGGTTGGATTCATTTTATCTTTCAGTTATGTCTGTCACAACAGTTGGATATGGTGATCAGGCATTCAAGTCGATGACTGGTCGGATTTTTGCTTCAATCTGGTTGCTTGTATCGACCCTTGCTGTTGCTCGGGCCTTTCTTTATTTAGCGGAGGCAAGAGTAGATAAGCGGCATAGGATGATGGCAAAATGGATACTTGGTCAAGACATGACTGTTTCTGAGTTTCTTGCTGCTGATATTGACAACAATGGCTTTGTGAGTAGGTCAGAATATGTGATATACAAGCTGAAGGAGATGGGTAAGGTATCAGAGAAAGATGTCATGCAGATATCTAATAACTTTGATAGGCTAGACAGTGGCAAGTGTGGGAAGATTACACTGGCTGATCTCTTGGAAAGTCATCACTGA 1278 43.66 MEKEPLLPYLSPRGKPSPLPPQLCPLPENDEITLPMTPTEFKDRLIFGPSSSPQDSSPIFDALTLSLSSSRPSASSSLQDPSTPLDPRSQPQSQQAWLVDSNYTWPKSNLHRSKTAPAMAVINDVNHSQEPKPQFGKQSIIRQAVVLLIVYLSLGVLIYWLNRDNFAAQETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVKRESGKSYIIDVKKGRMRIRMKVALALGVVILCIGVGMGVMHFVENLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADIDNNGFVSRSEYVIYKLKEMGKVSEKDVMQISNNFDRLDSGKCGKITLADLLESHH* 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1206876 1210634 - Chy2G024380.1 Chy02g00171 219619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00171 425 SUPERFAMILY EF-hand 363 422 IPR011992 -
Chy02g00171 425 Gene3D - 137 237 - -
Chy02g00171 425 SUPERFAMILY Voltage-gated potassium channels 255 361 - -
Chy02g00171 425 Gene3D - 270 333 - -
Chy02g00171 425 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Chy02g00171 425 Pfam Ion channel 271 340 IPR013099 -
Chy02g00171 425 Pfam Ion channel 147 226 IPR013099 -
Chy02g00171 425 MobiDBLite consensus disorder prediction 11 25 - -
Chy02g00171 425 PRINTS Two pore domain K+ channel signature 183 211 IPR003280 GO:0005267|GO:0016020|GO:0071805
Chy02g00171 425 PRINTS Two pore domain K+ channel signature 303 312 IPR003280 GO:0005267|GO:0016020|GO:0071805
Chy02g00171 425 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 90 420 IPR003280 GO:0005267|GO:0016020|GO:0071805
Chy02g00171 425 SUPERFAMILY Voltage-gated potassium channels 141 233 - -
Chy02g00171 425 MobiDBLite consensus disorder prediction 1 34 - -
Chy02g00171 425 MobiDBLite consensus disorder prediction 71 93 - -
Chy02g00171 425 Gene3D - 334 425 - -
Chy02g00171 425 PANTHER TWO-PORE POTASSIUM CHANNEL 3 90 420 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00171 Chy-Chr2:1206876 Chy12g00628 Chy-Chr12:8994580 1.74E-63 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00171 K05389 - csv:101220017 804.668