Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00195 ATGGCAGAATTGGATGAAGTGGTGAGTGTGATAGAGAGTAAAAAGTATAGGATGGAGACAACAAGGTCATGGGAGTTCTCAGGGGTTGAAGAAGACAAACCCACCATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAAGATGTTGTCATTGGAATGCTCGACAGTGGTGTGTGGCCAAAGTCCAAAAGCTTCAGTGATAAAGGGATGGGACCCATTCCAAAATCATGGAAAGGAATCTGCCAAACAGGACCTGCCTTCCAATCTGCTCATTGTAATAGGAAGATAATTGGAGCTCGATTTTACCTAAAGGGATACGAGCATCACTTTGGCCGTTTAAATGAAACGGCGGACTACCGATCACCCTGCGACAAGGACGGCCATGGATCTCACACAGCCTCCATCGCCGGCGGCCGGAGGGTATACAACGTGTCGGCCTTTGGTGGCGTTGCTTGGGGCACGGCCTCCGGCGGTGCCCCCTGGGCCCGACTTGCAATTTACAAAGTTTGTTGGGCCATTCCCAACCAAATGAAAGCTTTAGGAAACGTTTGTTTCGACACCGACATGTTGGCGGCCATGGACGACGCCATCGCCGACGGTGTCGACGTTCTCAGCTTGTCTATTGGAAAATCGGAACCGTACAATTACACGGATGACGGAATGGCTATAGGAGCTCTGCACGCGGTTAAAAAAGACATTGTTGTGTCTTGTAGTGCTGGGAATTATGGACCTACGCCGTCGGCGTTGTCTAATGTTGCGCCGTGGATTATCACCGTTGGAGCTAGCACTGTGGATCGGGAATTTTATTCTCCGGTCATTCTCGGTAATGGGTTGAAGATTAAGGGATTGTCAGTGGCTCCATCGAAGTTGGAGAGGAAGAAGATGTATCCATTAGTGTATGCTGGAGATATAATGAACCCTCATGCACCTCGAAACCAATCTGGGCTATGTGTGGCAGGCTCGCTTTCACATGAGAAAGCCAAAGGAAAAATAGTGTTATGCTTTAGAGGTGAAGGAATCAGCCGATTCGCCGGCAGCCTCGAAGTTCAAAGATCGGGTGGCGCCGGAATGATACTCGGAAACGTGCCAGCGGTAGGACGAAGGCCCCACGCCGATCCCCATTTTGTTCCGGCCACCGCCGTGTCTTACGAAGATGCAAATATAATCCTCAAATATATAAAATCTCGCAAAAATCCAACTGCAACTATTGTTCCACCTGTCACTATCTACGGCTCCAGGCCCGCGCCGGCCATGGCCAACTTCTCAAGTCGAGGTCCAAACCCTATCGACCCTCATTTTCTTAAGCCGGACATAACAGCTCCGGGAGTGGACATATTAGCAGCATGGTCCGAACAAGATTCCCCAACTAAACTCCCTAAATACTTAGACCCTCGTATCGTCCAATACAATCTCTACTCCGGCACTTCCATGTCTTGTCCCCACGTCTCCGCCGCCGCCGCCCTCCTCCGTGCCATCCACCCTACATGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCTCCACCACCAACAATAAATCCGGCCAACCCATCACCGACGACTCCACCCTCGACAACTCCCCCGCCACCCCTTTCTCCTTCGGCTCCGGCCACTTCCGTCCCTCCAAGGCGGCCGACCCCGGCCTCGTCTACGACTCCAATTACACCGATTACCTCCATTACCTGTGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCAAGTGCCCTCCACGTGCTCTCCACCCCCATGACCTGAATTACCCTTCCATTGCCGTCCCTCAACTCAGAGACGTCGTGAGGATCAAAAGGACGGTTACTAATGTGGGCGGCGGAGGTAAAAGTGTTTACTTTTTTAAGAGCGAAGCACCGCGGGGTGTGGCGAGGAGGAGAATGAGATTAAGAGTCGATCTAATATCCATTGGACATAAGTGTGTATACTCATATTGCCACACCTATCCCGTCCCCCCCAACTTCAGTTTCACTTAA 1992 51.36 MAELDEVVSVIESKKYRMETTRSWEFSGVEEDKPTINDLVSRANYGKDVVIGMLDSGVWPKSKSFSDKGMGPIPKSWKGICQTGPAFQSAHCNRKIIGARFYLKGYEHHFGRLNETADYRSPCDKDGHGSHTASIAGGRRVYNVSAFGGVAWGTASGGAPWARLAIYKVCWAIPNQMKALGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSEPYNYTDDGMAIGALHAVKKDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLERKKMYPLVYAGDIMNPHAPRNQSGLCVAGSLSHEKAKGKIVLCFRGEGISRFAGSLEVQRSGGAGMILGNVPAVGRRPHADPHFVPATAVSYEDANIILKYIKSRKNPTATIVPPVTIYGSRPAPAMANFSSRGPNPIDPHFLKPDITAPGVDILAAWSEQDSPTKLPKYLDPRIVQYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTSTTNNKSGQPITDDSTLDNSPATPFSFGSGHFRPSKAADPGLVYDSNYTDYLHYLCGLKMNSIDPSFKCPPRALHPHDLNYPSIAVPQLRDVVRIKRTVTNVGGGGKSVYFFKSEAPRGVARRRMRLRVDLISIGHKCVYSYCHTYPVPPNFSFT* 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1328642 1334606 - Chy2G024620.1 Chy02g00195 219643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00195 663 ProSiteProfiles Serine proteases, subtilase domain profile. 23 546 - -
Chy02g00195 663 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 3 645 - -
Chy02g00195 663 Pfam PA domain 296 388 IPR003137 -
Chy02g00195 663 Gene3D - 265 410 - -
Chy02g00195 663 MobiDBLite consensus disorder prediction 508 528 - -
Chy02g00195 663 CDD Peptidases_S8_3 16 510 IPR034197 -
Chy02g00195 663 Pfam Subtilase family 46 520 IPR000209 GO:0006508|GO:0008236
Chy02g00195 663 Pfam Fibronectin type-III domain 586 629 IPR041469 -
Chy02g00195 663 PRINTS Subtilisin serine protease family (S8) signature 124 137 IPR015500 -
Chy02g00195 663 PRINTS Subtilisin serine protease family (S8) signature 473 489 IPR015500 -
Chy02g00195 663 PRINTS Subtilisin serine protease family (S8) signature 46 65 IPR015500 -
Chy02g00195 663 ProSitePatterns Serine proteases, subtilase family, serine active site. 474 484 IPR023828 -
Chy02g00195 663 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 645 IPR045051 -
Chy02g00195 663 CDD PA_subtilisin_like 272 403 - -
Chy02g00195 663 Gene3D - 563 639 - -
Chy02g00195 663 Gene3D Peptidase S8/S53 domain 48 559 IPR036852 GO:0004252|GO:0006508
Chy02g00195 663 SUPERFAMILY Subtilisin-like 39 550 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00195 Chy-Chr2:1328642 Chy06g01923 Chy-Chr6:23142590 2.23E-157 dispersed
Chy02g00195 Chy-Chr2:1328642 Chy01g00548 Chy-Chr1:3921594 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00195 - - csv:101217410 1259.97