Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g00198 | ATGACGAGTCCAGTGAAGTTTAAGTTGGGGAAACAGTCGTCCCTAGCGCCTGATGGAGATGACCATCTCGAAGATTTGGAGGAGCTGGTCAAGCAGCATCAGACTGAGGAGGGGATAGATTCGAGGGTGAGGCTGATGTATTTGGCCAACGAAGGTGATTTGGAAGGGATTAATGAAGTCTTGGATTCGGGAGTTGATGTTAATTTCCGTGATATCGACAACCGGACGGCTTTGCATATTGCTGCTTGCCAGGGATTTGCCGACGTTGTCGCTTTGTTGCTCGAACGTGGCGCTGAAGTTGACTCCAAAGATCGCTGGGGGAGCACGCCTCTTAGAGATGCTATACATTACAAAAACCACGATGTGATCAAACTTCTGGAGAAGCATGGCGCAAAGCCTCCGGTGGCCCCCATGCTCGTCAAGAATGCCCGTGAAGTGCCAGATTATGAAATTGATCCTAAGGAACTTGATTTTACTAACAGTGTGAACATTACCAAGGGAACATTCCGCAGAGCATCTTGGCGTGGAACCGAGGTTGCTGTGAAAGAGCTTGGAGAAGATCTATTCACTGATGAGGATAAAGTGAGGGCTTTCAGAAATGAGCTTGCATTGCTTCAGAAAATACGACACCCCAACGTTGTCCAGTTTCTAGGTGCTGTTACTCAAAGTTGGCCGATGATGATCGTTACAGAATATTTACCAAAGGGAGATCTTGGAGCATTATTGAGTAGAAAGAGAGAAATAAAAACAATGTCTGTTGTGAGACTTGCCCTTGATATTGCAAGGGGGATGAACTACTTGCATGAGAACAAGCCAGCACCAATTATTCATCGTAATCTTGAGCCTTCAAATATTCTGAGGGATGATTCTGGCCACCTGAAAGTAGCAGATTTCGGAGTTAGCAAGTTATTGACAGTTAAAGAAGATAAATTTTCAACTTGTTCAGAGACTTCACGAAGATACCAAGCTCCAGAGGTTTTCAAAAATGAAGAATATGACACAAAGGTGGACGTGTTTTCATTTGCTTTGATTTTGCAAGAGATGCTTGAAGGCTGTTCTCCATTTCCTGACAAAGCTGATAGTGAAGTTCCTAAATTGTACGCAGCAGGAGAACGTCCCCCATTTGGAGCACTAATTAAACGTTACGCAAATGGACTAAAAGAGCTAATTGAAGAATGTTGGAACGAGAAGCCAAGTAAGAGACCAACTTTTAGGCAGATAATAACCCAGCTGGAATTCATTTACAACAGATTCTGTCATAAGAGGCGCTGGAAGGTCAGGCCATTGAAATGCTTCCAGAATATTGAGGCAATGCTGAAGAAAGATCGTCTCCGCCGAAGCAGTTTCAATCTATCTTCACATTCTTCTGCCAGCAGTATTTGA | 1383 | 44.03 | MTSPVKFKLGKQSSLAPDGDDHLEDLEELVKQHQTEEGIDSRVRLMYLANEGDLEGINEVLDSGVDVNFRDIDNRTALHIAACQGFADVVALLLERGAEVDSKDRWGSTPLRDAIHYKNHDVIKLLEKHGAKPPVAPMLVKNAREVPDYEIDPKELDFTNSVNITKGTFRRASWRGTEVAVKELGEDLFTDEDKVRAFRNELALLQKIRHPNVVQFLGAVTQSWPMMIVTEYLPKGDLGALLSRKREIKTMSVVRLALDIARGMNYLHENKPAPIIHRNLEPSNILRDDSGHLKVADFGVSKLLTVKEDKFSTCSETSRRYQAPEVFKNEEYDTKVDVFSFALILQEMLEGCSPFPDKADSEVPKLYAAGERPPFGALIKRYANGLKELIEECWNEKPSKRPTFRQIITQLEFIYNRFCHKRRWKVRPLKCFQNIEAMLKKDRLRRSSFNLSSHSSASSI* | 461 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1354518 | 1359266 | - | Chy2G024650.1 | Chy02g00198 | 219646 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g00198 | 460 | SMART | ANK_2a | 73 | 102 | IPR002110 | GO:0005515 | |
Chy02g00198 | 460 | SMART | ANK_2a | 106 | 135 | IPR002110 | GO:0005515 | |
Chy02g00198 | 460 | SMART | ANK_2a | 40 | 69 | IPR002110 | GO:0005515 | |
Chy02g00198 | 460 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 | 8 | 442 | - | - | |
Chy02g00198 | 460 | Gene3D | Transferase(Phosphotransferase) domain 1 | 234 | 455 | - | - | |
Chy02g00198 | 460 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 8 | 442 | - | - | |
Chy02g00198 | 460 | ProSiteProfiles | Ankyrin repeat region circular profile. | 73 | 105 | - | - | |
Chy02g00198 | 460 | PIRSF | ILK | 2 | 434 | - | - | |
Chy02g00198 | 460 | SUPERFAMILY | Protein kinase-like (PK-like) | 167 | 415 | IPR011009 | - | |
Chy02g00198 | 460 | Gene3D | Phosphorylase Kinase; domain 1 | 150 | 233 | - | - | |
Chy02g00198 | 460 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Chy02g00198 | 460 | CDD | STKc_MAP3K-like | 164 | 411 | - | - | |
Chy02g00198 | 460 | Pfam | Protein tyrosine and serine/threonine kinase | 163 | 411 | IPR001245 | GO:0004672|GO:0006468 | |
Chy02g00198 | 460 | ProSiteProfiles | Ankyrin repeat profile. | 73 | 105 | IPR002110 | GO:0005515 | |
Chy02g00198 | 460 | Pfam | Ankyrin repeats (3 copies) | 45 | 133 | IPR002110 | GO:0005515 | |
Chy02g00198 | 460 | Gene3D | - | 12 | 146 | IPR036770 | - | |
Chy02g00198 | 460 | ProSiteProfiles | Protein kinase domain profile. | 123 | 414 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy02g00198 | 460 | SUPERFAMILY | Ankyrin repeat | 44 | 135 | IPR036770 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy02g00198 | Chy12g00047 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g00198 | Chy-Chr2:1354518 | Chy10g01031 | Chy-Chr10:15602821 | 1.02E-91 | dispersed | |
Chy09g00524 | Chy-Chr9:5434026 | Chy02g00198 | Chy-Chr2:1354518 | 2.49E-14 | dispersed | |
Chy11g00991 | Chy-Chr11:13942694 | Chy02g00198 | Chy-Chr2:1354518 | 0 | wgd | |
Chy12g00047 | Chy-Chr12:415459 | Chy02g00198 | Chy-Chr2:1354518 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71027 | PF07714 | PK_Tyr_Ser-Thr | 3.70E-54 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g00198 | - | - | csv:101215728 | 883.634 |