Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00198 ATGACGAGTCCAGTGAAGTTTAAGTTGGGGAAACAGTCGTCCCTAGCGCCTGATGGAGATGACCATCTCGAAGATTTGGAGGAGCTGGTCAAGCAGCATCAGACTGAGGAGGGGATAGATTCGAGGGTGAGGCTGATGTATTTGGCCAACGAAGGTGATTTGGAAGGGATTAATGAAGTCTTGGATTCGGGAGTTGATGTTAATTTCCGTGATATCGACAACCGGACGGCTTTGCATATTGCTGCTTGCCAGGGATTTGCCGACGTTGTCGCTTTGTTGCTCGAACGTGGCGCTGAAGTTGACTCCAAAGATCGCTGGGGGAGCACGCCTCTTAGAGATGCTATACATTACAAAAACCACGATGTGATCAAACTTCTGGAGAAGCATGGCGCAAAGCCTCCGGTGGCCCCCATGCTCGTCAAGAATGCCCGTGAAGTGCCAGATTATGAAATTGATCCTAAGGAACTTGATTTTACTAACAGTGTGAACATTACCAAGGGAACATTCCGCAGAGCATCTTGGCGTGGAACCGAGGTTGCTGTGAAAGAGCTTGGAGAAGATCTATTCACTGATGAGGATAAAGTGAGGGCTTTCAGAAATGAGCTTGCATTGCTTCAGAAAATACGACACCCCAACGTTGTCCAGTTTCTAGGTGCTGTTACTCAAAGTTGGCCGATGATGATCGTTACAGAATATTTACCAAAGGGAGATCTTGGAGCATTATTGAGTAGAAAGAGAGAAATAAAAACAATGTCTGTTGTGAGACTTGCCCTTGATATTGCAAGGGGGATGAACTACTTGCATGAGAACAAGCCAGCACCAATTATTCATCGTAATCTTGAGCCTTCAAATATTCTGAGGGATGATTCTGGCCACCTGAAAGTAGCAGATTTCGGAGTTAGCAAGTTATTGACAGTTAAAGAAGATAAATTTTCAACTTGTTCAGAGACTTCACGAAGATACCAAGCTCCAGAGGTTTTCAAAAATGAAGAATATGACACAAAGGTGGACGTGTTTTCATTTGCTTTGATTTTGCAAGAGATGCTTGAAGGCTGTTCTCCATTTCCTGACAAAGCTGATAGTGAAGTTCCTAAATTGTACGCAGCAGGAGAACGTCCCCCATTTGGAGCACTAATTAAACGTTACGCAAATGGACTAAAAGAGCTAATTGAAGAATGTTGGAACGAGAAGCCAAGTAAGAGACCAACTTTTAGGCAGATAATAACCCAGCTGGAATTCATTTACAACAGATTCTGTCATAAGAGGCGCTGGAAGGTCAGGCCATTGAAATGCTTCCAGAATATTGAGGCAATGCTGAAGAAAGATCGTCTCCGCCGAAGCAGTTTCAATCTATCTTCACATTCTTCTGCCAGCAGTATTTGA 1383 44.03 MTSPVKFKLGKQSSLAPDGDDHLEDLEELVKQHQTEEGIDSRVRLMYLANEGDLEGINEVLDSGVDVNFRDIDNRTALHIAACQGFADVVALLLERGAEVDSKDRWGSTPLRDAIHYKNHDVIKLLEKHGAKPPVAPMLVKNAREVPDYEIDPKELDFTNSVNITKGTFRRASWRGTEVAVKELGEDLFTDEDKVRAFRNELALLQKIRHPNVVQFLGAVTQSWPMMIVTEYLPKGDLGALLSRKREIKTMSVVRLALDIARGMNYLHENKPAPIIHRNLEPSNILRDDSGHLKVADFGVSKLLTVKEDKFSTCSETSRRYQAPEVFKNEEYDTKVDVFSFALILQEMLEGCSPFPDKADSEVPKLYAAGERPPFGALIKRYANGLKELIEECWNEKPSKRPTFRQIITQLEFIYNRFCHKRRWKVRPLKCFQNIEAMLKKDRLRRSSFNLSSHSSASSI* 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1354518 1359266 - Chy2G024650.1 Chy02g00198 219646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00198 460 SMART ANK_2a 73 102 IPR002110 GO:0005515
Chy02g00198 460 SMART ANK_2a 106 135 IPR002110 GO:0005515
Chy02g00198 460 SMART ANK_2a 40 69 IPR002110 GO:0005515
Chy02g00198 460 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 8 442 - -
Chy02g00198 460 Gene3D Transferase(Phosphotransferase) domain 1 234 455 - -
Chy02g00198 460 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 442 - -
Chy02g00198 460 ProSiteProfiles Ankyrin repeat region circular profile. 73 105 - -
Chy02g00198 460 PIRSF ILK 2 434 - -
Chy02g00198 460 SUPERFAMILY Protein kinase-like (PK-like) 167 415 IPR011009 -
Chy02g00198 460 Gene3D Phosphorylase Kinase; domain 1 150 233 - -
Chy02g00198 460 MobiDBLite consensus disorder prediction 1 20 - -
Chy02g00198 460 CDD STKc_MAP3K-like 164 411 - -
Chy02g00198 460 Pfam Protein tyrosine and serine/threonine kinase 163 411 IPR001245 GO:0004672|GO:0006468
Chy02g00198 460 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Chy02g00198 460 Pfam Ankyrin repeats (3 copies) 45 133 IPR002110 GO:0005515
Chy02g00198 460 Gene3D - 12 146 IPR036770 -
Chy02g00198 460 ProSiteProfiles Protein kinase domain profile. 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00198 460 SUPERFAMILY Ankyrin repeat 44 135 IPR036770 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g00198 Chy12g00047 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00198 Chy-Chr2:1354518 Chy10g01031 Chy-Chr10:15602821 1.02E-91 dispersed
Chy09g00524 Chy-Chr9:5434026 Chy02g00198 Chy-Chr2:1354518 2.49E-14 dispersed
Chy11g00991 Chy-Chr11:13942694 Chy02g00198 Chy-Chr2:1354518 0 wgd
Chy12g00047 Chy-Chr12:415459 Chy02g00198 Chy-Chr2:1354518 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71027 PF07714 PK_Tyr_Ser-Thr 3.70E-54 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00198 - - csv:101215728 883.634