Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00214 ATGATGTCCAAATCGTATACCAATCTTTTAGATTTAGCTTCTGGGAATTTTCCCATTATGGGTCGTGAGAAGAAGCGACTTCCACGAGTAATGACTGTTGCGGGGGTAATATCAGAGCTTGATGATGATCAGGCAAATAGTGTGACTTCTGAGGGACCTTCGTCAGTTGTGCAAGACCGTATAATTATTGTTGCCAATCAGCTTCCTATTAAAGCTAAGCGTAGACCGGACAATAAAGGGTGGAGTTTTAGTTGGGATGAAGACTCTTTGCTGTGGCAGCTTAAGGATGGTTTACCTGAAGATATGGAGGTTTTGTATGTAGGATCTTTGCGGGTGGATGTTGATTTTTCTGAACAAGAAGATGTATCACAGCTTTTGTTGGAGAGGTTTAAGTGTGTTCCAGCGTTTTTACCTCATGACATTTTATCTAAATTTTATCATGGTTTTTGTAAGCAGCAATTGTGGCCGCTCTTCCATTATATGCTTCCGTTCTCTGCAACTCATGGTGGTCGGTTTGACCGCTCTCTGTGGGAAGCATATGTAGCAGCAAATAAAATTTTTTCTCAAAGGGTGATTGAGGTCATAAACCCAGATGATGACTTTGTATGGATTCATGATTATCATCTAATGGTGCTACCCTCCTTCTTGAGGAGAAGGTTTACAAGACTGAGAATGGGCTTTTTTCTTCACAGTCCATTTCCTTCATCAGAAATATATAGGACATTGCCAGTGAGGGAAGAGATTCTCAAGGCACTTTTGAATGCAGACCTTATTGGTTTTCACACTTTTGATTATGCTCGACATTTCCTGTCTTGTTGTAGTCGGATGTTGGGTTTGGAATATCAGTCAAAGAGGGGCTATATTGGCTTGGAATATTTTGGAAGGACCGTGGGGATAAAAATCATGCCTGTTGGAATTCACATGGGCCAGATGGAGTCAGTGTTAAGACTTGCTGACAAAGACTGGAGGGTACAGGAGCTCAAGCGACAGTTTGAAGGAAAAGTTGTGTTACTTGGAGTTGATGATATGGATATTTTTAAAGGGGTCAATCTGAAGTTGTTGGCAATGGAACAGATGCTGCGGCAACATCCAAAGTGGCAGAGAAGAGCCGTTTTCGTACAGATTGCAAACCCAGCTAGAGGAAAAGGGAAAGATCTCGAGGAAATACAAGATGAAATACAGGAATGCTGCCAGAGAATTAATGAAAGTTTTGGACAGCCAAATTATGAGCCAATTGTGTTCATTGATCGGCCTGTTTCTCTCGCTGAAAGAGCGGCATATTATACCATTGCTGAATGTGTTGTAGTCACAGCGGTGAGGGATGGTATGAACCTAACTCCTTATGAGTACGTTGTCTGCAGGCAGGGATCCCCTGGATCAGATTATAGCTCAGAAACAAATGGACCACAAAAGAGCATGCTAGTCATATCTGAGTTCATGGGATGTTCCCCTTCTCTTAGTGGTGCAATACGGGTTAACCCATGGAACATTGAAGCCACTGCTGAAGCATTGAATGAGGCAATATCAATGGCTGAAGCTGAAAAGCAATTGCGCCACGAGAAGCATTATAAATATGTGAGTACACATGATGTGGCGTACTGGTCAAAGAGTTTTTTCCAAGATATGGAAAGAACTTGTAAGGATCACTTTAGAAGACGGTGCTGGGGAATTGGGTTGGGCTTTGGTTTCAGGGTTGTAGCACTTGATCCTAACTTTAGAAAGCTGTCTATTGATGCCATTGTGGCTGCATATTCGAGGTCTAAAAGGAGGGCTATACTTTTGGATTATGATGGCACTGTCATGCCGCAAACTTCAATCGACAAGACCCCAAGTCGCCAGGTGATTTCAATCATAGATTCACTTTGTGATGATGTTAGGAATACTGTTTTTGTGGTCAGTGGAAGAGGGCGTGAAAGTTTGGGCAATTGGTTTTCTCCTTGCGATAAACTTGGAATTGCTGCAGAGCATGGCTATTTTATGAGGTGGTCCGCCGATAAGGACTGGGAGAATTGTGGTCAAGGTAGTGATTTTGGCTGGATACAGATTGCAGAGCCAGTCATGAAATTATACACAGAAGCTACTGACGGCTCTTCTATTGAAACCAAGGAAAGTGCCTTGGTGTGGCATCACCAGGATGCAGACCCTGATTTCGGTTGCAGCCAGGCGAAAGAATTATTGGATCACCTTGAAAGTGTGCTGGCCAATGAACCAGTTGCTGTAAAAAGTGGTCAGTTTATTGTAGAAGTGAAGCCACAGGGAGTCAGCAAAGGTTTGGTGGCAGAAAAGATCTTCACGTCAATGGCAGAAGCAGGAAGACGGGCTGATTTTGTGCTTTGCATTGGTGATGACAGATCTGATGAAGACATGTTTGAGATAATTGGTAATGCAGTGTCAAGTGGCGCCCTCTCTTCCAATACATTAGTTTTTGCCTGCACGGTTGGACAGAAACCAAGCAAGGCCAAGTATTACCTAGATGACACAACTGAGGTCATTAATATGCTTGAAGCCCTTGCAGAAGTTTCGGACATAGCTTCTCCTCCAGAATCCCCTTGA 2553 43.16 MMSKSYTNLLDLASGNFPIMGREKKRLPRVMTVAGVISELDDDQANSVTSEGPSSVVQDRIIIVANQLPIKAKRRPDNKGWSFSWDEDSLLWQLKDGLPEDMEVLYVGSLRVDVDFSEQEDVSQLLLERFKCVPAFLPHDILSKFYHGFCKQQLWPLFHYMLPFSATHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDFVWIHDYHLMVLPSFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMGQMESVLRLADKDWRVQELKRQFEGKVVLLGVDDMDIFKGVNLKLLAMEQMLRQHPKWQRRAVFVQIANPARGKGKDLEEIQDEIQECCQRINESFGQPNYEPIVFIDRPVSLAERAAYYTIAECVVVTAVRDGMNLTPYEYVVCRQGSPGSDYSSETNGPQKSMLVISEFMGCSPSLSGAIRVNPWNIEATAEALNEAISMAEAEKQLRHEKHYKYVSTHDVAYWSKSFFQDMERTCKDHFRRRCWGIGLGFGFRVVALDPNFRKLSIDAIVAAYSRSKRRAILLDYDGTVMPQTSIDKTPSRQVISIIDSLCDDVRNTVFVVSGRGRESLGNWFSPCDKLGIAAEHGYFMRWSADKDWENCGQGSDFGWIQIAEPVMKLYTEATDGSSIETKESALVWHHQDADPDFGCSQAKELLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFTSMAEAGRRADFVLCIGDDRSDEDMFEIIGNAVSSGALSSNTLVFACTVGQKPSKAKYYLDDTTEVINMLEALAEVSDIASPPESP* 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1426609 1430443 - Chy2G024810.1 Chy02g00214 219662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00214 850 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Chy02g00214 850 CDD HAD_TPP 591 832 - -
Chy02g00214 850 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 842 IPR001830 GO:0003824|GO:0005992
Chy02g00214 850 SUPERFAMILY HAD-like 590 838 IPR036412 -
Chy02g00214 850 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Chy02g00214 850 Pfam Trehalose-phosphatase 593 827 IPR003337 GO:0003824|GO:0005992
Chy02g00214 850 Gene3D Glycogen Phosphorylase B; 50 320 - -
Chy02g00214 850 TIGRFAM T6PP: trehalose-phosphatase 587 838 IPR003337 GO:0003824|GO:0005992
Chy02g00214 850 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 798 IPR006379 -
Chy02g00214 850 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Chy02g00214 850 Gene3D - 719 845 IPR023214 -
Chy02g00214 850 Gene3D - 589 695 IPR023214 -
Chy02g00214 850 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 1 842 - -
Chy02g00214 850 Gene3D Glycogen Phosphorylase B; 321 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00325 Chy-Chr1:2333737 Chy02g00214 Chy-Chr2:1426609 2.82E-99 dispersed
Chy01g00326 Chy-Chr1:2334885 Chy02g00214 Chy-Chr2:1426609 0 dispersed
Chy02g00214 Chy-Chr2:1426609 Chy06g02157 Chy-Chr6:25872096 0 dispersed
Chy07g01323 Chy-Chr7:17891795 Chy02g00214 Chy-Chr2:1426609 8.05E-07 dispersed
Chy02g00214 Chy-Chr2:1426609 Chy10g00918 Chy-Chr10:14841488 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00214 K16055 - csv:101213082 1707.19