Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00222 ATGGAAGTTGTAAAAGTAGCTCTGCTACTGTTCTTCTTCATCTGGGTGGTCTCTGCCTCAGACAGTCATTTGTCTCCCAAAGGAGTAAACTATGAAGTGGCGGCTTTGATGTCAATGAAGAGTAGGATAAAGGACGAGCGGAGAGTGATGCAAGGATGGGACATAAATTCGGTCGATCCATGCACCTGGAATATGGTTGCTTGCTCTACTGAGGGATTTGTGATTTCTCTCGAGATGCCAAATATGGGTTTATCTGGAACGCTTTTCCCTAGCATTGGGAACCTGAGTCATCTTAGGATAATGTTGTTGCAAAATAATGAGATATCTGGTCCAATTCCCGATGATATAGGAGAACTTTCAGAGCTTCAGACTCTTGACCTTTCTAACAACCAGTTCGTTGGCGGGATTCCAAGTTCTTTGGGGTTTCTTACTCGTTTAAATTACTTGAAGCTCAGTAGTAACAAGTTAAGTGGACCAATACCAGAATCTGTTGCAAATATCTCAGGCCTTTCCTTTTTGGATTTATCGAACAATAATCTCAGTGGTCCAACTCCTAGAATACTTGCGAAAGAGTACAGTGTGGCAGGGAATAGCTTCCTTTGTGCATCTTCATTATCTAAATTTTGTGGTGTAGTTCCGAAGCCAGTTAATGAAACTGGTTTGTCTCAGAAAGATAATGGCCGTCATCACTTGGTTCTTTACATAGCTCTAATTGTGAGTTTCACATTTGTGGTTTCTGTTGTTTTACTTTTTGGCTGGGTGCATTGTTATAGATCTCATCTTGTCTTCACATCCTACGTTCAGCAAGATTATGAATTTGATATAGGTCATCTGAAAAGGTTTACATTCCGCGAGCTACAAAAGGCAACAAGTAATTTTAGTCCCCAAAACATCCTGGGACAGGGTGGTTTTGGAGTAGTTTATAAAGGTTATCTTCCAAATGGGACATATGTTGCTGTCAAGAGACTGAAAGATCCGAATTACACTGGAGAAGTGCAGTTTCAAACTGAAGTTGAAATGATTGGCTTAGCAGTGCACCGCAACCTCTTACGTTTGTATGGCTTTTGTATGACCCCAGATGAGAGATTGCTGGTTTATCCTTATATGCCAAATGGGAGTGTTGCTGACCGTCTTAGAGATGCAGGCCAAGAGAAGCCTTCATTGAATTGGAACAGAAGATTGCGTATTGCCGTTGGCGCTGCACGTGGACTTCTATACTTGCATGAGCAGTGTAACCCAAAAATTATTCACCGGGATGTAAAAGCTGCAAATATTCTTCTAGATGAAGGCTTTGAAGCCGTGGTCGGCGATTTTGGTCTGGCAAAGATGTTAGATAGGAGAGATTCACATGTTACTACTGCAGTTAGAGGCACAGTGGGACATATTGCCCCGGAATATCTTTCAACTGGACAATCTTCAGAAAAGACTGATGTTTTTGGATTTGGCATATTGGTTCTTGAACTCTTGACAGGGCAAAAAGCACTTGATGCTGGGAATGGTCAAATTCGAAAGGGAATGATCCTCGAATGGGTTAGAACATTACATGAGGAGAAGAGGTTAGATGTGCTGGTGGACAGGGATCTTAAAGGATGTTTTGATGCCATGGAGCTTGAAAAATGTGTAGAGTTGGCTCTGCAGTGTACTCAATCACATCCACAACTTCGACCAAAGATGTCCGATATCTTGAAGATTCTAGAAGGTCTCGTTGGACAGTCTAGCCAAATGGAGGAATCACCAGCTGGAGCAAGTCTTTATGAGGATAGAGCGCACAGTTTCTCAAGAAATTACAGTGATATTCATGAAGAATCTTCATTTGTGGTCGAAGCCATGGAGCTTTCAGGACCTCGGTGA 1851 42.14 MEVVKVALLLFFFIWVVSASDSHLSPKGVNYEVAALMSMKSRIKDERRVMQGWDINSVDPCTWNMVACSTEGFVISLEMPNMGLSGTLFPSIGNLSHLRIMLLQNNEISGPIPDDIGELSELQTLDLSNNQFVGGIPSSLGFLTRLNYLKLSSNKLSGPIPESVANISGLSFLDLSNNNLSGPTPRILAKEYSVAGNSFLCASSLSKFCGVVPKPVNETGLSQKDNGRHHLVLYIALIVSFTFVVSVVLLFGWVHCYRSHLVFTSYVQQDYEFDIGHLKRFTFRELQKATSNFSPQNILGQGGFGVVYKGYLPNGTYVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYPYMPNGSVADRLRDAGQEKPSLNWNRRLRIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDEGFEAVVGDFGLAKMLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILVLELLTGQKALDAGNGQIRKGMILEWVRTLHEEKRLDVLVDRDLKGCFDAMELEKCVELALQCTQSHPQLRPKMSDILKILEGLVGQSSQMEESPAGASLYEDRAHSFSRNYSDIHEESSFVVEAMELSGPR* 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1483656 1487267 - Chy2G024890.1 Chy02g00222 219670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00222 616 Gene3D Ribonuclease Inhibitor 29 211 IPR032675 -
Chy02g00222 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Chy02g00222 616 SMART serkin_6 293 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00222 616 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Chy02g00222 616 Pfam Protein kinase domain 296 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00222 616 SUPERFAMILY Protein kinase-like (PK-like) 275 566 IPR011009 -
Chy02g00222 616 SUPERFAMILY L domain-like 31 192 - -
Chy02g00222 616 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 616 - -
Chy02g00222 616 Gene3D Transferase(Phosphotransferase) domain 1 369 577 - -
Chy02g00222 616 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 616 - -
Chy02g00222 616 Pfam Leucine Rich Repeat 122 143 IPR001611 GO:0005515
Chy02g00222 616 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Chy02g00222 616 Gene3D Phosphorylase Kinase; domain 1 263 368 - -
Chy02g00222 616 ProSiteProfiles Protein kinase domain profile. 293 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00222 Chy-Chr2:1483656 Chy03g01723 Chy-Chr3:18729498 0 dispersed
Chy02g00222 Chy-Chr2:1483656 Chy09g00168 Chy-Chr9:1428418 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71028 PF00069 Pkinase 4.90E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00222 - - csv:101218118 1189.1