Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00294 ATGGACGAAGAGGCTAATTCTTGGCTTAGGAGAACGAAGTTTTCTCACACGGTTTATCATCGATGGGACTCATTAAGATTAAACCCAGTACCTTTCATCGTCGAACCACCTCGCAATTCTGGCTTGAAATCGAGGCCTTCATCGGCTTCATCTGCTCAGAAGCCGAATCCTGATATTTCGAAGATTCAGCGAAGTTTCATATCCAATAAACAGAGGTCTCTGTCTCCTCTCCCTGAGAGCAACCTCTCTGAAGTTTTCAAGGAAGCAAAATCCGAGAGTAAGAGATTCTCAACTCCAACTCCTCGACTTAGAGAACGAACTAAGGAATTCAAGAACAAGCTATTCAATAAGGACCCTCAAGTTTCAAAATCATCCAATTCCAAGTCATCGTTGAATACCAGTCCCTTGAAACAACTATCTTCAGGGAAAGGGCTTGATAAGTCAAAGTTGAAGAAGGACTCTTCCTGGACTAAATATTTCGATTCTGGAAAAGTCACTGCGGTTGAAACAGCGGATGACTGGACTGTTGATCTCTCCAAGTTGTTTGTTGGATTAAGGTTTGCTCATGGAGCTCATAGTCGACTTTATCATGGAAAATACAACGAGGAACCTGTTGCTGTTAAAATTATTAGAGTGCCTGATGATGACGAAAACGGAACGCTTGCGTCTCGATTGGAGAAGCAATTCACCAGAGAAGTTACCCTTTTATCCCGTCTCTATCATCCAAATGTTATAAAGTTTGTAGCTGCTTGTAGGAACCCACCTGTATACTGTGTCATTACTGAATATTTGTCTCAAGGATCGTTAAGGGCATACCTACACAAACTTGAGCACCAATCCCTCCCTTTGCAAAAACTAATTAAATTTGCTTTAGATGTCGCTCGTGGCATGGAATACCTTCACTCACAAGGTGTAATTCATCGGGATCTTAAGCCTGAGAATGTTCTTATTGATGAAGACATGCACTTGAAAATTGCAGATTTTGGTATAGCTTGTCCTGAGGCCTTTTTTGACCCATTAGCTGATGATCCCGGAACTTACCGATGGATGGCACCGGAGATGATCAAACACAAACCTTGTAGTCGAAAGGTTGACGTGTACAGCTTTGGGCTTATGTTATGGGAAATGGTATCTGGTGCAATTCCATACGAGGATATGACTCCCATTCAAGCAGCCTTTGCTGTTGTGAATAAGAATCTTAGGCCTGTTATCTCAAGTGATTGTCCATTAGCAATGCGAGCTTTAATCGAGCAATGTTGGTCGCTACAACCGGACAAGAGACCTGATTTCTGGCAGATTGTGAAGGTATTAGAGCAATTCGAATCTTCGCTTTCTCGTGATGGGACGCTGAATTTATTAGGTAACCCTCTGTCTAGTTTCCATGACCATAAGAAAGGGCTCCTCCATTGGATTCAAAAGCTTGGCCCCCTGCATCCCGAAGTTTCACCCTCGCCCGTGCCAAAACCAAAATTCTCATAA 1479 42.8 MDEEANSWLRRTKFSHTVYHRWDSLRLNPVPFIVEPPRNSGLKSRPSSASSAQKPNPDISKIQRSFISNKQRSLSPLPESNLSEVFKEAKSESKRFSTPTPRLRERTKEFKNKLFNKDPQVSKSSNSKSSLNTSPLKQLSSGKGLDKSKLKKDSSWTKYFDSGKVTAVETADDWTVDLSKLFVGLRFAHGAHSRLYHGKYNEEPVAVKIIRVPDDDENGTLASRLEKQFTREVTLLSRLYHPNVIKFVAACRNPPVYCVITEYLSQGSLRAYLHKLEHQSLPLQKLIKFALDVARGMEYLHSQGVIHRDLKPENVLIDEDMHLKIADFGIACPEAFFDPLADDPGTYRWMAPEMIKHKPCSRKVDVYSFGLMLWEMVSGAIPYEDMTPIQAAFAVVNKNLRPVISSDCPLAMRALIEQCWSLQPDKRPDFWQIVKVLEQFESSLSRDGTLNLLGNPLSSFHDHKKGLLHWIQKLGPLHPEVSPSPVPKPKFS* 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1918726 1921103 + Chy2G025610.1 Chy02g00294 219742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00294 492 PRINTS Tyrosine kinase catalytic domain signature 364 386 IPR001245 GO:0004672|GO:0006468
Chy02g00294 492 PRINTS Tyrosine kinase catalytic domain signature 408 430 IPR001245 GO:0004672|GO:0006468
Chy02g00294 492 PRINTS Tyrosine kinase catalytic domain signature 299 317 IPR001245 GO:0004672|GO:0006468
Chy02g00294 492 PRINTS Tyrosine kinase catalytic domain signature 345 355 IPR001245 GO:0004672|GO:0006468
Chy02g00294 492 PRINTS Tyrosine kinase catalytic domain signature 261 274 IPR001245 GO:0004672|GO:0006468
Chy02g00294 492 Pfam Protein tyrosine and serine/threonine kinase 188 437 IPR001245 GO:0004672|GO:0006468
Chy02g00294 492 MobiDBLite consensus disorder prediction 37 60 - -
Chy02g00294 492 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 464 - -
Chy02g00294 492 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 464 - -
Chy02g00294 492 Gene3D Transferase(Phosphotransferase) domain 1 266 453 - -
Chy02g00294 492 MobiDBLite consensus disorder prediction 110 149 - -
Chy02g00294 492 MobiDBLite consensus disorder prediction 117 141 - -
Chy02g00294 492 CDD STKc_MAP3K-like 188 437 - -
Chy02g00294 492 SUPERFAMILY Protein kinase-like (PK-like) 166 437 IPR011009 -
Chy02g00294 492 MobiDBLite consensus disorder prediction 41 60 - -
Chy02g00294 492 ProSiteProfiles Protein kinase domain profile. 181 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00294 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Chy02g00294 492 SMART serkin_6 181 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00294 492 Gene3D Phosphorylase Kinase; domain 1 169 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00294 Chy-Chr2:1918726 Chy12g01272 Chy-Chr12:17302183 2.24E-118 dispersed
Chy01g00317 Chy-Chr1:2263868 Chy02g00294 Chy-Chr2:1918726 1.69E-07 transposed
Chy03g00525 Chy-Chr3:7286151 Chy02g00294 Chy-Chr2:1918726 4.49E-71 transposed
Chy12g00928 Chy-Chr12:14655762 Chy02g00294 Chy-Chr2:1918726 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71032 PF07714 PK_Tyr_Ser-Thr 1.60E-61 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00294 - - csv:101204268 935.25