Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00369 ATGATTCATTTTCTCATTCAAACACCTTCTTCTTGGCCTTTAACTTTACTACTTCTGATTTCAATCTCTGGATTCATAATCCCTTGTTGTAGCCAACGTTATTTATCCTGCTCAGGAGCCAACACAGGTCACCCCAATCTAAATTCAAACATCAATTTCCTATTGGATTCCTTGATCTCTCACGCTTCCTCTCGCACTTTCTACACTGAGACCTCTAATGGAATCCATGGCCTCTTCCTCTGCCGAGGGGATGTTCCCAATGAGACTTGTCGTACCTGCATCGAAGGGGCTAGTCAACAAATCAAGGTCGATTGTGCATCACAAACAAATGGTACCATAGGCTTTGATGAATGTATGTTGAGATACTCAGTTGTGAACTTCTTTGGAATTCTGGAGATGTCTCCAAGAATACTACTATATAATAGTCTGAATCAATCTACTTTTGAAGACCGCGATTTCGTCGATCTTGCATTGGTGTCTAATTTAGTAAGAGATGCTAAAAATGCAAATTCGATGTTCAAGGAAGGTGAGGTAAATATAGTGGGGATGGATCAGAGATTTGGATTGGCACAGTGTACAAGAGATATTGGTAAGCGTGATTGTGAGATCTGTTTGACAAATTTAGTGGATTATGCAAAGGGATGTTGCCTAAGGCAACGAGCATGGCGAGTTTTAGCCCCCAATTGTAATTTAAGAGTTGAGGCCTTTCGTTTTTATGGACTTCCAACTCCATCCTTGCCTCTTGATGAAGAAGGTGAGGTGAAGACATTCAGTTTATTTTCTTGTCTGTCATCAAATTTTAAAGATCTTTTATCTAACGATAAAAGGGAATGCACAGGAGGGAGCAGAACAAGGATCATAGTCATCACCGTATCAACAGTTGCCGCGACTGCAGTTCTGCTAGGCCTATTGCTTGGCTCATTTTTATGGAGAAAAAAGAGACGGGAGATGGACAGAAGTGACGAGTTTCCTTTGCGAAATGGATCAGATCAACAACCAGTTTACTCACTAAGGCAACATTTTGATGAAACAAATCATGACAATGATGGAGATATGCATTACTTCAACTTTAGTACTCTAAAAGCTGCTACAAATAACTTTTCAGATGTTAATAAACTTGGAGAAGGGGGGTTTGGTCCAGTTTACAAGGGAAAGCTGATAGGTGGTGAGGAAGTAGCAGTGAAAAGACTATCATCAAAATCAAGTCAAGGACATGAAGAGTTTAAGAATGAAGCAAAGGTCATTTGGAAGCTTCAACATAAGAATCTGGTCAGGCTCTTGGGATGTTGTGTTGAAGGAGAAGAAAAACTTCTAGTCTATGAGTACATGGCAAATACTAGCCTTGATGCTTTCTTGTTTGATCCATTGAAGTGCAAACAACTTGATTTGCTCAAGCGCGAAAACATTGTCAATGGGATTGCAAGAGGAATTCTCTACCTCCATGAAGATTCTCGACTCAAAATCATCCACAGAGATTTGAAAGCAAGCAATGTACTATTAGATGAGGAGATGAACCCAAAAATATCAGACTTCGGAACTGCCAGGATATTTGGAGGCAAGCAAATTGATGCCAGCACCAATAGAATAGTTGGAACATATGGTTATATGGCACCAGAGTATGCTATGGAGGGAGTTTTCTCAGTTAAGTCTGACGTATACAGTTTTGGAGTTCTTATTCTAGAAGTGATGAGCGGGAAGAAAAACATTGGTTTTCTGAACATGGACAGAGCACAGAACCTTCTGTCATATGCGTGGGAGCTTTGGAGTGAAGGAAGAGCAGAGGAAATGATAGACAAGAACTTGAGCGGAGAATGTCCTGAGAGTGAGGCTGTAAAATGGATCCACATAGGGTTGTTGTGTGTGCAAGAAGATCCTAACATCAGGCCTACCATGTCAATGGTTGTTCTAATGCTTGGAAGCAAATCGATTCAGCTTCCTCAGCCATCAAAACCTCCATTTCTTACAAGTAGAGGGTCTCTAAGTAGATATCAATCTTCAACAACTGAAACAGGAACAGGGTTACACACCACAGATCAGTCGTCTACTAGTGCTTCTATTTAG 2061 40.66 MIHFLIQTPSSWPLTLLLLISISGFIIPCCSQRYLSCSGANTGHPNLNSNINFLLDSLISHASSRTFYTETSNGIHGLFLCRGDVPNETCRTCIEGASQQIKVDCASQTNGTIGFDECMLRYSVVNFFGILEMSPRILLYNSLNQSTFEDRDFVDLALVSNLVRDAKNANSMFKEGEVNIVGMDQRFGLAQCTRDIGKRDCEICLTNLVDYAKGCCLRQRAWRVLAPNCNLRVEAFRFYGLPTPSLPLDEEGEVKTFSLFSCLSSNFKDLLSNDKRECTGGSRTRIIVITVSTVAATAVLLGLLLGSFLWRKKRREMDRSDEFPLRNGSDQQPVYSLRQHFDETNHDNDGDMHYFNFSTLKAATNNFSDVNKLGEGGFGPVYKGKLIGGEEVAVKRLSSKSSQGHEEFKNEAKVIWKLQHKNLVRLLGCCVEGEEKLLVYEYMANTSLDAFLFDPLKCKQLDLLKRENIVNGIARGILYLHEDSRLKIIHRDLKASNVLLDEEMNPKISDFGTARIFGGKQIDASTNRIVGTYGYMAPEYAMEGVFSVKSDVYSFGVLILEVMSGKKNIGFLNMDRAQNLLSYAWELWSEGRAEEMIDKNLSGECPESEAVKWIHIGLLCVQEDPNIRPTMSMVVLMLGSKSIQLPQPSKPPFLTSRGSLSRYQSSTTETGTGLHTTDQSSTSASI* 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2353959 2356656 + Chy2G026360.1 Chy02g00369 219817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00369 686 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 35 670 - -
Chy02g00369 686 Pfam Protein tyrosine and serine/threonine kinase 371 636 IPR001245 GO:0004672|GO:0006468
Chy02g00369 686 Gene3D Phosphorylase Kinase; domain 1 340 442 - -
Chy02g00369 686 SMART serkin_6 367 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00369 686 ProSiteProfiles Gnk2-homologous domain profile. 133 238 IPR002902 -
Chy02g00369 686 Pfam Salt stress response/antifungal 41 123 IPR002902 -
Chy02g00369 686 Pfam Salt stress response/antifungal 157 234 IPR002902 -
Chy02g00369 686 ProSiteProfiles Gnk2-homologous domain profile. 29 127 IPR002902 -
Chy02g00369 686 CDD STKc_IRAK 373 638 - -
Chy02g00369 686 Gene3D - 138 238 IPR038408 -
Chy02g00369 686 Gene3D - 30 127 IPR038408 -
Chy02g00369 686 MobiDBLite consensus disorder prediction 647 686 - -
Chy02g00369 686 Gene3D Transferase(Phosphotransferase) domain 1 443 647 - -
Chy02g00369 686 SUPERFAMILY Protein kinase-like (PK-like) 350 666 IPR011009 -
Chy02g00369 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Chy02g00369 686 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 35 670 - -
Chy02g00369 686 ProSiteProfiles Protein kinase domain profile. 367 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00369 Chy-Chr2:2353959 Chy12g01037 Chy-Chr12:15569969 1.03E-13 dispersed
Chy12g01026 Chy-Chr12:15484341 Chy02g00369 Chy-Chr2:2353959 2.53E-25 dispersed
Chy02g00369 Chy-Chr2:2353959 Chy02g00370 Chy-Chr2:2359828 0 tandem
Chy10g00236 Chy-Chr10:5990296 Chy02g00369 Chy-Chr2:2353959 2.96E-15 transposed
Chy12g01036 Chy-Chr12:15562552 Chy02g00369 Chy-Chr2:2353959 3.17E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71034 PF07714 PK_Tyr_Ser-Thr 2.70E-50 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00369 - - cmo:103484582 1153.66