Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00370 ATGTTCTGTTTCCTCGATTACAGATCTTTGCCAATTTCGTTGCTAATACTGATTTCAATATTTGGGCTCAGCCACTCCCATCATTTCGAACCCAAATATAGGTTCCACATCTGTTCAGCGCCAAGTAATAATACAAACGCTAATCTGGGTTCGAACCTCAGTGGCTTACTGAGTTCCCTATCAGAAGCTTCATCTGACAGCTTCTACAATATAACTTTCAATGGAATGTACGGTGCCGTCCTTTGTCGAGGCGATATTAACAGCGATAACTGTCACAGTTGTGTCAGTACCGCAAGCAAAGAATTAAGCGTTCGATGCTCTTTAAGAGTTAACGGCACAATATGGTACGATGAGTGTATACTGAGATACTCAGACAAGAACTTCTTGGGTACTGTAGAGATGTCGCCAAGATTCCTCATGGGCGATTCTGGGAACCAGACATCGCCAGATGATCGTGACATTGACGGACCTGATCTGTTGTCTCAGATGGCCAGTGAAGCTGCCGGGTTAGAGATGATGTTCAAGGCAAACAAGTTAGATAACCGTGGGACACGCTATGGACTGGTTCAGTGCACAAGGGATCTTAACAGTAACCAGTGTGGTACATGTTTGACGGCTCTGCTGGAGGAGATCAAGCTGGTTTACAAAGGGAGAGTGGGGTGGAGAATTTTGAGCCAAAGTTGTAGCATAACGTATGAGCAATATCTTTTCTATCAGCTACCAGATTCGCCTCCAGGATTAAGTGCGAAAATGATTGCAGTAATCACTGTATCAACGATTGCTGCAGTAGCAATTCTTGCTATTCTATTGTATTGCTTACTTTTGTCCAGGAAGAGACGACAAGATATGGACACAGGTGAACAAGTTCTGTTGCGAAATTTGGGAGATGCAAAGTCCGCAGAATTGATGAAGCAGGATTTGCATTCAAGAGATAGAGACAATGATGAAGACATGCACTACTTCAGTTTCATCACCCTACAGGTTGCCACAAACAACTTTGCAGATGCAAATAGGCTTGGAGAAGGTGGTTTTGGTCCGGTTTTCAAGGGAAAGTTGACGAATGGGGAAGAAATAGCTGTAAAAAGACTGTCTGTGAAGTCGAGTCAAGGTCACGATGAGTTCAAGAATGAAGTAATGGTCATAATGAAGCTTCAACACAAAAATCTGGTCAGACTTTTGGGATGCTGTCTGGAGGGAGAGGAAAAGCTACTTGTCTATGAGTACATGGCAAACACTAGTCTAGATGCCTTCTTATTTGATCCAGTTAAAACCAAACAACTTGACTGGGTTAAGCGCAACAACATCATCAATGGAGTTGCAAAAGGAATTCTTTACCTACACGAAGACTCTCGACTCAAAATCATTCATAGGGATTTAAAAGCTAGCAATGTGTTGTTGGATGACGAGATGAATGCAAAGATATCAGACTTTGGAACAGCCAGAATTTTTGGAGGCAAGCAAGTTGAGGCTAGCACCAACAGAGTTGTTGGGACTTTTGGATATATGGCACCAGAATATGCAATGGAAGGAGTGTTTTCAATAAAGTCTGATGTTTACAGTTTTGGGATTTTAATGTTAGAAGTGATAAGCGGAAGAAAGAACAGCGGTTTCTTCAAAGTAGACAATGCACAGAGCCTTCTAGCACAGGCATGGCAACTATGGAAGGAAGGCAGAGAAGAGGAAATGGTTGATCCGAACCTGGTTGGAGAATGCTCTTTAAGCGAAGCTCTGAGATGGATCCAAATCGGTCTTCTATGTGTCCAACAAGATCCAAACATCAGACCAACCATGTCAATGGTTGTTCTAATGCTTGGAAGCAAATCGATTCACCTTCCCCAACCGTCGAAACCTCCATTCTTTCCGATTGGGTTCCCGATGTCAGCCAACCAATCTTCAACGACTTTACTGGGAACGGGATATCTCTCCAGTCAATCCTCTACCACTGCATCTATATAG 1956 43.05 MFCFLDYRSLPISLLILISIFGLSHSHHFEPKYRFHICSAPSNNTNANLGSNLSGLLSSLSEASSDSFYNITFNGMYGAVLCRGDINSDNCHSCVSTASKELSVRCSLRVNGTIWYDECILRYSDKNFLGTVEMSPRFLMGDSGNQTSPDDRDIDGPDLLSQMASEAAGLEMMFKANKLDNRGTRYGLVQCTRDLNSNQCGTCLTALLEEIKLVYKGRVGWRILSQSCSITYEQYLFYQLPDSPPGLSAKMIAVITVSTIAAVAILAILLYCLLLSRKRRQDMDTGEQVLLRNLGDAKSAELMKQDLHSRDRDNDEDMHYFSFITLQVATNNFADANRLGEGGFGPVFKGKLTNGEEIAVKRLSVKSSQGHDEFKNEVMVIMKLQHKNLVRLLGCCLEGEEKLLVYEYMANTSLDAFLFDPVKTKQLDWVKRNNIINGVAKGILYLHEDSRLKIIHRDLKASNVLLDDEMNAKISDFGTARIFGGKQVEASTNRVVGTFGYMAPEYAMEGVFSIKSDVYSFGILMLEVISGRKNSGFFKVDNAQSLLAQAWQLWKEGREEEMVDPNLVGECSLSEALRWIQIGLLCVQQDPNIRPTMSMVVLMLGSKSIHLPQPSKPPFFPIGFPMSANQSSTTLLGTGYLSSQSSTTASI* 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2359828 2362816 + Chy2G026370.1 Chy02g00370 219818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00370 651 Gene3D - 31 128 IPR038408 -
Chy02g00370 651 Gene3D - 140 237 IPR038408 -
Chy02g00370 651 SMART serkin_6 333 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00370 651 Pfam Protein tyrosine and serine/threonine kinase 337 602 IPR001245 GO:0004672|GO:0006468
Chy02g00370 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Chy02g00370 651 SUPERFAMILY Protein kinase-like (PK-like) 316 632 IPR011009 -
Chy02g00370 651 CDD STKc_IRAK 339 604 - -
Chy02g00370 651 ProSiteProfiles Protein kinase domain profile. 333 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00370 651 ProSiteProfiles Gnk2-homologous domain profile. 134 237 IPR002902 -
Chy02g00370 651 Pfam Salt stress response/antifungal 171 235 IPR002902 -
Chy02g00370 651 Pfam Salt stress response/antifungal 42 125 IPR002902 -
Chy02g00370 651 Gene3D Transferase(Phosphotransferase) domain 1 409 611 - -
Chy02g00370 651 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 630 - -
Chy02g00370 651 Gene3D Phosphorylase Kinase; domain 1 307 408 - -
Chy02g00370 651 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 630 - -
Chy02g00370 651 ProSiteProfiles Gnk2-homologous domain profile. 31 128 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00370 Chy-Chr2:2359828 Chy12g01037 Chy-Chr12:15569969 2.54E-11 dispersed
Chy04g01441 Chy-Chr4:21039699 Chy02g00370 Chy-Chr2:2359828 2.95E-98 dispersed
Chy10g00236 Chy-Chr10:5990296 Chy02g00370 Chy-Chr2:2359828 1.15E-15 dispersed
Chy10g00886 Chy-Chr10:14646950 Chy02g00370 Chy-Chr2:2359828 8.46E-105 dispersed
Chy02g00369 Chy-Chr2:2353959 Chy02g00370 Chy-Chr2:2359828 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71035 PF07714 PK_Tyr_Ser-Thr 4.90E-48 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00370 - - csv:101207389 1187.94