Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00387 ATGATCTCTTCACTGAGGCTTACATCTTCCAATTTCAATTCCACTGAAATTTTCAACAGAAAATCTCAACTTCTTAGGCCGAATCTACCCTTGCAGTCCCCAGATTCCAGTGTTCTTAAACATGTCGATCGATCTTTTTTAACCAATAAACCACTTCACATCTCGTCGGTTGAAAATTTTTCTTTGCTCACAAAATCATCTGAGCGTTCCACGGTGTGCAGGGCTTATGAGGCCGAATCGCGACGTCTGCAAATTAACATTGAGCTTCCTGATGAACAGACGACTCAGAAACTCAAAATTGCGCTCTATTTCGCCACTTGGTGGGCTTTGAATGTTGTGTTCAATGTCTATAACAAGAAGGTTCTTAATGCCTTCCCTTATCCTTGGCTCACCTCTACTCTCTCCCTCGCCGCTGGATCGCTTATGATGCTTGTTTCTTGGACCACTCGAATGGTCGACGCTCCCAAAACCGATTTGGATTTCTGGAAATCTCTATTGCCGGTTGCAGTGGCACATACAATTGGCCATGTTGCAGCAACTGTAAGCATGTCCAAGGTCGCAGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCGGCTTTCAGTGTGTTGGTCTCTAGGTTTTTGTTGGGTGAGATGTTTCCATTGCCCGTTTACTTATCTCTAATCCCAATCATTGGAGGCTGCGCTCTTTCCGCCATTACTGAGCTCAATTTCAACATAATTGGTTTCTCGGGTGCGATGATATCAAACTTGGCATTTGTATTTAGAAACATATTCTCAAAGAAAGGGATGAAAGGAAAGTCAGTGAGTGGGATGAATTACTATGCTTGTCTCTCATTGTTGTCTCTGCTCATTCTTACTCCTTTTGCCATTGCCGTGGAGGGACCCAAGTTGTGGGCTGAAGGACTCCAAAAGGCTCTCGCTCAAATTGGTCCCAATTTCATTTGGTGGTTGGGAGCTCAAAGTATGTTCTATCACTTGTACAATCAAGTGTCTTACATGTCTCTTGATCAGATATCACCATTGACATTCAGCGTGGGTAACACAATGAAGAGAATATTCGTAATAGTGTCGTCCATTATCATCTTCCACACCCCGATCCGACCCGTGAATGCCATTGGAGCTGCCATTGCAATCCTTGGAACTTTCCTCTACTCGCAGGTTCGGAGAACCTTTAGACCTACTGTCTCCCGAAATCCCCATAACTACATATCATAA 1221 44.06 MISSLRLTSSNFNSTEIFNRKSQLLRPNLPLQSPDSSVLKHVDRSFLTNKPLHISSVENFSLLTKSSERSTVCRAYEAESRRLQINIELPDEQTTQKLKIALYFATWWALNVVFNVYNKKVLNAFPYPWLTSTLSLAAGSLMMLVSWTTRMVDAPKTDLDFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLPVYLSLIPIIGGCALSAITELNFNIIGFSGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSLLSLLILTPFAIAVEGPKLWAEGLQKALAQIGPNFIWWLGAQSMFYHLYNQVSYMSLDQISPLTFSVGNTMKRIFVIVSSIIIFHTPIRPVNAIGAAIAILGTFLYSQVRRTFRPTVSRNPHNYIS* 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2470861 2472640 + Chy2G026540.1 Chy02g00387 219835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00387 406 PANTHER SOLUTE CARRIER FAMILY 35 37 390 - -
Chy02g00387 406 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
Chy02g00387 406 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 37 390 - -
Chy02g00387 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 234 - -
Chy02g00387 406 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 98 392 IPR004696 GO:0016021|GO:0022857|GO:0055085
Chy02g00387 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 286 387 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00387 Chy-Chr2:2470861 Chy02g01687 Chy-Chr2:16869224 0 dispersed
Chy06g00267 Chy-Chr6:1792692 Chy02g00387 Chy-Chr2:2470861 2.26E-99 transposed
Chy02g00387 Chy-Chr2:2470861 Chy06g01802 Chy-Chr6:21686807 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00387 K15283 - csv:101216621 712.22