Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00388 ATGGAGTTACAGGACGCCATTCTTCTTCTCTCCGCCTTCCTCTTCTTCTCCTTATGGTGGCGCTACTGGTCTGCTACCGGGGGCGGATCGAAGAATCTTCCACCTGGCCCACCTGGCTGGCCGATCGTCGGAAACCTCATCCAAGTCATCCTCCAGCGTCGTCCATTCATCTTCGTAGCACGCGATTTACGTGAAAAATATGGTCCCATTTTCACCATGCAAATGGGACAACGCACACTCATCATTGTGTCAAGTGCGGAACTCATTCACGAAGCTCTTGTGCAACGTGGACCCTTATTCGCCAGCCGCCCTGCAGACTCTCCCATCCGCCTTGTCTTTAGCGTCGGCAAATGCGCTGTCAACTCTGCCGAATACGGTCCTCTCTGGCGAACCCTCCGCCGCAACTTCGTTACTGAGTTAATCAATCCTACCAGAATCAAGCAGTGTAGCTGGATACGGAAGTGGGCCATAGAAAGCCATCTGGAAAGACTAAGAAAAGAGAATGCAGAGAAAGGATTCGTTGAGGTTATGAGTAACTGCCGCCTTTCAGTCTGTAGTATTCTCATCTGCATATGCTTTGGAGCCAAAATCCCGGAACAAGAGATTAAAGTCATAGAGAGTATACTGAAGGATGTGATGTTGATTACACTGCCAAAGCTTCCGGACTTCTTGCCGATTCTGACGCCGTTGTTTAGGCGGCAGTTGAAGCAAGCGAAAGAGCTGAGGAGAAAGCAGTTGGAGTGTTTGATTCCGTTGATAAGGAAGAGAAGGATGTTTATGGAGAGAAATGGGGATGAGAGTGTGAGGAAGGAGTTGCCGGAGATGGTTAGTCCGATGGGGGCGGCGTATCTTGATTCGCTTTTCGAACTGGAAACGCCGGGACGAGGGAGGTTGGGAGAGGAGGAATTGGTGACGCTTTGTTCGGAAGTTATTAATGCTGGAACTGACACGAGCGCGACGGCGTTGGAGTGGGCTTTGCTTCATTTGGTACAAGATCAAGACGTTCAGGAAAGACTATACAATGAAATCATTAACGTTGTTGGTAAAGATGGGCTAATTACCGAAGGGGACATAGAGAAAATGCCATATCTAGGGGCGGTGGTAAAAGAGACTTTCCGGCGTCACCCACCAAGTCATTTCTTACTATCTCACGCGGCGACCAAAGAAACCGAGCTCGGCGGCTACACAATCCCGGCGGATGCCAGCGTGGAGTTTTACACAGCCCATTTGACAGAAGACTCGAACACATGGGAAGAACCGGGTTCATTCCGACCGGACAGGTTCTTGGAAGGCGACGGCGTTGGCGTGGACGTCACAGGGACTAAGGCCGTCAAGATGGTACCGTTCGGGGCAGGGCGGCGAATCTGCCCGGCCATGACTTTGGGCACGTTGCATGTTCACATGATGCTGGCCAAAATGGTACACGCTTTCAAGTGGGTCCCGGTTCCCGGAGCCCCGCCGGACCCGACCGAGACATTTGCCTTTACCGTGATTATGAAGAATCCTCTGAAGGCTATCGTATTGGACCGGGCTCGTTTATGA 1542 51.43 MELQDAILLLSAFLFFSLWWRYWSATGGGSKNLPPGPPGWPIVGNLIQVILQRRPFIFVARDLREKYGPIFTMQMGQRTLIIVSSAELIHEALVQRGPLFASRPADSPIRLVFSVGKCAVNSAEYGPLWRTLRRNFVTELINPTRIKQCSWIRKWAIESHLERLRKENAEKGFVEVMSNCRLSVCSILICICFGAKIPEQEIKVIESILKDVMLITLPKLPDFLPILTPLFRRQLKQAKELRRKQLECLIPLIRKRRMFMERNGDESVRKELPEMVSPMGAAYLDSLFELETPGRGRLGEEELVTLCSEVINAGTDTSATALEWALLHLVQDQDVQERLYNEIINVVGKDGLITEGDIEKMPYLGAVVKETFRRHPPSHFLLSHAATKETELGGYTIPADASVEFYTAHLTEDSNTWEEPGSFRPDRFLEGDGVGVDVTGTKAVKMVPFGAGRRICPAMTLGTLHVHMMLAKMVHAFKWVPVPGAPPDPTETFAFTVIMKNPLKAIVLDRARL* 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2478579 2481171 + Chy2G026550.1 Chy02g00388 219836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00388 513 PANTHER CYTOCHROME P450 LIKE PROTEIN 4 508 - -
Chy02g00388 513 SUPERFAMILY Cytochrome P450 34 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Chy02g00388 513 Pfam Cytochrome P450 34 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy02g00388 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 508 - -
Chy02g00388 513 Gene3D Cytochrome P450 25 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00388 Chy-Chr2:2478579 Chy03g00416 Chy-Chr3:6139345 1.97E-159 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00388 K21995 - csv:101216852 1009.59