Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00416 ATGGACAAAGGATGGGGTCTAACCCTTCGTGATTCTGATCATCAGTCCATTGGGTTCTTCTCAAACAAGCAACCACCACCCCCTCCCCCACCCACTCTCAATTCCTTTCAAAGAATGTTTCAAGGTTTAGAATTCTCCGGAAAACTTGGCCACACCGACTCCACTCCCGACGATAATAATCGTTTGGCCGTTGAGGTCGATTTTTTCTCCTCTAAGAAAAGAGTGGTTGATGATCTTCAGGCTGATCAAGACTCCAAACCTACTTCTACTACTTCTATCATTAAAGACGATAAAGCTTCGACCCCTCCGCCTCCCCCCACAACTTCCTTCAATCTTGTTAACACTGGGTTGCATCTGTTAACTGCTAACACCGGAAGCGATCAATCAACCGTGGATGATGGAATTTCATCAGATGGTGAAAATAAACGAGCCAAAAACGAGCTAGCGCAGCTACAAGTGGAGCTTCAGCGAATGAACGCGGAGAATCACAAGCTAAGGGACATGCTAAGCCATGTGAGCAACAGCTATAGTTCTTTACATATGCATCTCTTGAGCTTAATGCAACAGAAGCAGCAACAACAAAATCACCCCTCCGAACCCGCTCATCAACGAGAGATTGGTGGGGAGAAGAAATCAACGGAAATAAAACATGAAGTTGGAAAGGTAATGGTACCAAGACAATTTATGGATCTAGGACCAAGTGGAAATAACAACAACATAGGTGAAAGCGAAGAATTATTATGTAATTCCTCATCGGATGAAAGAACTCGTTCTGGGTCTCCATTGAACATCAACAACAACAACAACAACAACAATACTGAAACCGCTTCCAAAAAAAGAGATCACGCGGAAATCATGCCTCCTAACTTCGATCACGAAAATTCCAAAAGATCCATCCCCAGAGAAGATAGCCCCGAATCAGAATCTAAGGGTTGGGGTCCCAACAACCACAAGACCCCCCGCTTCAACAATTCTTCTAATTCTAAACCACTTGACCAATCCACCGAAGCCACCATGCGTAAAGCCCGTGTCTCAGTCCGTGCTCGTTCCGAAGCTCCCATGATTTCCGATGGGTGTCAATGGCGAAAATATGGCCAAAAAATGGCTAAAGGAAACCCTTGTCCACGAGCCTATTATCGCTGCACAATGGCTGTGGGTTGCCCTGTTCGAAAACAAGTTCAACGTTGTGCTGAAGATAGGACTATATTGATAACAACTTACGAAGGCAACCACAACCACCCACTTCCGCCGGCGGCGATGGCGATGGCGTCAACCACGACAGCGGCGGCTACTATGTTATTATCAGGGTCTATGTCAAGTGCGGACCATAATTTAATGAACCCAAATTTATTAGCCCGAGCCATACTTCCATGTTCTTCAAGCATGGCTACAATTTCAGCTTCAGCTCCATTTCCAACCATCACATTAGACCTCACTCACACTCCAAACCCATTACAGTTTCAAAGACCCACCGCAGCGCCTTTCCAAGTGCCGTTCCCTGGCGGACAACCACCATCAGCCGCCGCCCAATTGCCTCAAGTATTGGGACAAGCCTTGTATAACAATCAGTCAAAATTCTCCGGCCTACAGCTTTCTCATGAAATGGGAGCTAATTCCTCTCACTTGGGTCATCACCAAATTACACAACCCGCGACTCCAGCTCAACCCGGTGGTGCTTCTTTTGCTGACACGTTGAGTGCCGCAACGGCTGCTATCACCGCTGATCCCAATTTCACAGCCGCTCTAGCCGCCGCTATCTCCTCCATCATCGTAAACTGCAAAGTTACAATGAGAAAGATCAGCTTTAGTCACCTTTTGGTTTCTCTGTTACTTTTGATTCTACATTATTCCTCTGAAGCAACATCTGCTTCCAATGAAGGGTTTTTAAGGATTGGATTGAAAAAGATTAAATCTGATCAAAACAGTCGGTTCAAAGCTTTGCTTGAGTCAAAGAAAGGAAAGTTTTTAGGATCTTCTGTTGGAAAACATAATCAATGGGGTAATAATCTTGAAGAATCTAAAAATGCTGATATTGTACCATTAAAGAACTATTTGGATGCTCAATACTATGGAGAGATTGGCATTGGCACACCACCTCAAAAGTTCACTGTAATTTTTGATACTGGAAGCTCTAATTTGTGGGTGCCATCTGCCAAATGTATTTTTTCGCTTGCTTGCTTTTTCCATGCTAAGTATCAATCAGGGCGGTCAAGCACATACAAAAAAAATGGAACATCTGCTGCTATTCAGTACGGTTCAGGAGCTATTTCTGGCTTCTTTAGTTACGACAACGTTCGAGTTGGTGATGCTATCGTTCGTAATCAGGAACTCATTGAGGCAACTAGCATGTCTACTATGACATTCATGGCCGCCAAATTTGATGGTATATTGGGACTTGGATTTCAAGAGATCGCGACTGGTGGTGCTGTTCCAGTGTGGTATAACATGGTTAAACAAAAACTTGTCAAGGAGCAAGTTTTCTCGTTTTGGCTGAATCGTAATGCTGAAGAGAAAGAAGGAGGTGAACTTGTGTTTGGAGGGGTCGATCCTAAGCACTTCAAAGGCCAACATACATATGTGCCTGTGACTGACAAAGGGTATTGGCAGTTCGACATTGGCGATATTCTTATTGGTGGTGAAACAACAAAATATTGTGCTGGCGGTTGCTCTGCAATTGCAGATTCTGGAACTTCTTTGTTGGCTGGTCCATCTAATATAGTGGTATCAATTAATAGAGCAATTGGAGCAGCTGCAGTTGCACATCCAGAATGCAAGGCAATTGTTTCACAATATAGACGGGCTATTATGGATTTGCTTTTAGCCAAGGCACAACCAGAGAAGATATGCTCCAAAATTGGGGTGTGTACCTTTGATGAAACTCATGATGTTAGTTTGAAAATTGAGAACGTGATGAGTGATAAAGATGGTAGATCGTCTGGTGGGTTCTCAGAAGCTATGTGCTCAGCTTGTGAGATGGCGGTTTTGTGGATTCAAGATGAGCTGAAGCAGAACAAAACTCAAGAAGATATCATTGATAATGTCAATGAGCTATGCGACCGTGGGTTGAACCAAGATGAAACATTGGTTGACTGTGGACGAATCTCTCAAATGCCTAACGTGTCCTTCACCATTGGCGATAGAGTTTTTGAGCTCACCTCAAAAGATTATATTCTGAAGGTGGGTGAGGGATCTGCAGCTCAATGCATCAGTGGATTCATACCTTTCGACATTCCTCCTCCTCGTGGACCCCTATGGATCTTGGGAGACGTTTTCATGGGACCTTATCATACAGTCTTTGATTTTGGCAAAGCGAGAGTCGGATTTGCCGAAGCTGCTTGA 3339 44.14 MDKGWGLTLRDSDHQSIGFFSNKQPPPPPPPTLNSFQRMFQGLEFSGKLGHTDSTPDDNNRLAVEVDFFSSKKRVVDDLQADQDSKPTSTTSIIKDDKASTPPPPPTTSFNLVNTGLHLLTANTGSDQSTVDDGISSDGENKRAKNELAQLQVELQRMNAENHKLRDMLSHVSNSYSSLHMHLLSLMQQKQQQQNHPSEPAHQREIGGEKKSTEIKHEVGKVMVPRQFMDLGPSGNNNNIGESEELLCNSSSDERTRSGSPLNINNNNNNNNTETASKKRDHAEIMPPNFDHENSKRSIPREDSPESESKGWGPNNHKTPRFNNSSNSKPLDQSTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTTAAATMLLSGSMSSADHNLMNPNLLARAILPCSSSMATISASAPFPTITLDLTHTPNPLQFQRPTAAPFQVPFPGGQPPSAAAQLPQVLGQALYNNQSKFSGLQLSHEMGANSSHLGHHQITQPATPAQPGGASFADTLSAATAAITADPNFTAALAAAISSIIVNCKVTMRKISFSHLLVSLLLLILHYSSEATSASNEGFLRIGLKKIKSDQNSRFKALLESKKGKFLGSSVGKHNQWGNNLEESKNADIVPLKNYLDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSAKCIFSLACFFHAKYQSGRSSTYKKNGTSAAIQYGSGAISGFFSYDNVRVGDAIVRNQELIEATSMSTMTFMAAKFDGILGLGFQEIATGGAVPVWYNMVKQKLVKEQVFSFWLNRNAEEKEGGELVFGGVDPKHFKGQHTYVPVTDKGYWQFDIGDILIGGETTKYCAGGCSAIADSGTSLLAGPSNIVVSINRAIGAAAVAHPECKAIVSQYRRAIMDLLLAKAQPEKICSKIGVCTFDETHDVSLKIENVMSDKDGRSSGGFSEAMCSACEMAVLWIQDELKQNKTQEDIIDNVNELCDRGLNQDETLVDCGRISQMPNVSFTIGDRVFELTSKDYILKVGEGSAAQCISGFIPFDIPPPRGPLWILGDVFMGPYHTVFDFGKARVGFAEAA* 1113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2603287 2619928 - Chy2G026830.1 Chy02g00416 219864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00416 1112 PANTHER ASPARTIC PROTEINASE-LIKE 605 1112 - -
Chy02g00416 1112 SUPERFAMILY Acid proteases 609 1111 IPR021109 -
Chy02g00416 1112 MobiDBLite consensus disorder prediction 82 97 - -
Chy02g00416 1112 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 704 715 IPR001969 GO:0004190|GO:0006508
Chy02g00416 1112 SUPERFAMILY WRKY DNA-binding domain 348 416 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g00416 1112 Pfam Saposin-like type B, region 1 986 1020 IPR007856 GO:0006629
Chy02g00416 1112 ProSiteProfiles Peptidase family A1 domain profile. 689 1109 IPR033121 -
Chy02g00416 1112 MobiDBLite consensus disorder prediction 540 555 - -
Chy02g00416 1112 Pfam Saposin-like type B, region 2 923 955 IPR008138 -
Chy02g00416 1112 ProSiteProfiles WRKY domain profile. 350 416 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g00416 1112 MobiDBLite consensus disorder prediction 15 36 - -
Chy02g00416 1112 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 605 1112 IPR001461 GO:0004190|GO:0006508
Chy02g00416 1112 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 891 902 IPR001969 GO:0004190|GO:0006508
Chy02g00416 1112 SMART WRKY_cls 355 415 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g00416 1112 MobiDBLite consensus disorder prediction 275 308 - -
Chy02g00416 1112 CDD phytepsin 679 1110 IPR033869 GO:0004190
Chy02g00416 1112 ProSiteProfiles Saposin B type domain profile. 919 959 IPR008139 -
Chy02g00416 1112 MobiDBLite consensus disorder prediction 228 338 - -
Chy02g00416 1112 MobiDBLite consensus disorder prediction 188 214 - -
Chy02g00416 1112 Gene3D - 919 1022 - -
Chy02g00416 1112 MobiDBLite consensus disorder prediction 309 338 - -
Chy02g00416 1112 Coils Coil 141 168 - -
Chy02g00416 1112 Pfam WRKY DNA -binding domain 357 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g00416 1112 SUPERFAMILY Saposin 921 1019 IPR011001 -
Chy02g00416 1112 ProSiteProfiles Saposin B type domain profile. 983 1024 IPR008139 -
Chy02g00416 1112 Pfam Eukaryotic aspartyl protease 688 1111 IPR033121 -
Chy02g00416 1112 Gene3D WRKY domain 340 417 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g00416 1112 Gene3D Acid Proteases 629 847 IPR021109 -
Chy02g00416 1112 MobiDBLite consensus disorder prediction 231 274 - -
Chy02g00416 1112 MobiDBLite consensus disorder prediction 77 107 - -
Chy02g00416 1112 Gene3D Acid Proteases 848 1112 IPR021109 -
Chy02g00416 1112 MobiDBLite consensus disorder prediction 540 559 - -
Chy02g00416 1112 PRINTS Pepsin (A1) aspartic protease family signature 695 715 IPR001461 GO:0004190|GO:0006508
Chy02g00416 1112 PRINTS Pepsin (A1) aspartic protease family signature 841 854 IPR001461 GO:0004190|GO:0006508
Chy02g00416 1112 PRINTS Pepsin (A1) aspartic protease family signature 891 902 IPR001461 GO:0004190|GO:0006508
Chy02g00416 1112 PRINTS Pepsin (A1) aspartic protease family signature 1085 1100 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00416 Chy-Chr2:2603287 Chy06g01857 Chy-Chr6:22383479 0 dispersed
Chy01g00439 Chy-Chr1:3151990 Chy02g00416 Chy-Chr2:2603287 2.94E-140 wgd
Chy12g01078 Chy-Chr12:15869215 Chy02g00416 Chy-Chr2:2603287 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17445 PF00026 Asp 2.10E-126 CL0129 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00416 K08245 - csv:101222214 1044.26