Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00436 ATGGCGACCTCATGTTTCGGTTCACTTAGGATTCGTAAATCAAAAGGCAAACCCTTATCAACCCCTTCCTCTTTTAAATCCCAGATGAATTCTGAAATGGAAAATATGGAAAGGAGAAGATTTGATAGTTTGGAATCGTGGTCGATGATCCTAGAGTCGGAAAATGTTGAAACTTGGGAGACATCAAAGGAAGATCAGGAAGAGTGGACAGCTGATTTATCTCAACTCTTCATTGGTAACAAATTTGCCTCTGGCGCTCACAGTCGGATATACCGTGGAATTTACAAGCAGAGAGCCGTTGCTGTGAAGATGGTGAGAATTCCAAACCAAAAGGAGGAAACAAGAGCCAAACTCGAGCAACAGTTCAAGTCCGAAGTTGCCTTGCTTTCTCGTCTCTTTCATCCCAACATAGTTCAGTTCATTGCAGCCTGTAAAAAACCGCCTGTATACTGCATAATTACAGAGTATATGTCACAAGGAACTCTGAGGATGTATCTAAACAAGAAAGAGCCATATTCACTCTCAACAGAAACAATACTGAGGTTAGCTCTTGACATATCAAGAGGAATGGAATACCTCCATTCCCAAGGAGTAATCCACAGAGATCTAAAATCAAACAACTTGCTTCTAAACGATGAAATGAGAGTAAAAGTGGCCGATTTCGGAACCTCCTGCCTCGAAACACAGTGCCGAGAATCAAAAGGGAACATGGGAACTTACCGATGGATGGCGCCGGAAATGATCAAAGAGAAGCCTTATACTCGCAAAGTTGATGTGTACAGCTTTGGGATTGTGCTGTGGGAACTCACCACGGCTCTGCTTCCCTTTCAAGGAATGACCCCCGTGCAAGCTGCCTTTGCCGTCGCCGAGAAGAATGAGAGACCACCATTGCCGGCGAGTTGTCAGCCGGCGCTAGCCCACCTGATTAAACGGTGTTGGGCGGCGAATCCGTCGAAGCGGCCGGATTTCAGCGACATTGTGGCGGCGTTAGAGAAATACGACGAGTGTGTGAAAGAGGGACTTCCTCTTGCACACCATAGAAGATTGGTAAACAAAAACGCTATTATTGAACGCTTGAAAGCTTGTGCTTCAACCAGCTCTTCAATACCTATACATGCTTGA 1122 45.19 MATSCFGSLRIRKSKGKPLSTPSSFKSQMNSEMENMERRRFDSLESWSMILESENVETWETSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRESKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVAALEKYDECVKEGLPLAHHRRLVNKNAIIERLKACASTSSSIPIHA* 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2755036 2756439 + Chy2G027030.1 Chy02g00436 219884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00436 373 CDD STKc_MAP3K-like 83 330 - -
Chy02g00436 373 Gene3D Transferase(Phosphotransferase) domain 1 159 363 - -
Chy02g00436 373 MobiDBLite consensus disorder prediction 13 32 - -
Chy02g00436 373 Gene3D Phosphorylase Kinase; domain 1 65 158 - -
Chy02g00436 373 MobiDBLite consensus disorder prediction 17 31 - -
Chy02g00436 373 SMART serkin_6 76 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00436 373 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 361 - -
Chy02g00436 373 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 361 - -
Chy02g00436 373 PRINTS Tyrosine kinase catalytic domain signature 238 248 IPR001245 GO:0004672|GO:0006468
Chy02g00436 373 PRINTS Tyrosine kinase catalytic domain signature 154 167 IPR001245 GO:0004672|GO:0006468
Chy02g00436 373 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672|GO:0006468
Chy02g00436 373 PRINTS Tyrosine kinase catalytic domain signature 192 210 IPR001245 GO:0004672|GO:0006468
Chy02g00436 373 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Chy02g00436 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Chy02g00436 373 Pfam Protein tyrosine and serine/threonine kinase 78 330 IPR001245 GO:0004672|GO:0006468
Chy02g00436 373 ProSiteProfiles Protein kinase domain profile. 76 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00436 373 SUPERFAMILY Protein kinase-like (PK-like) 51 330 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g00436 Chy12g01101 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00436 Chy-Chr2:2755036 Chy12g00928 Chy-Chr12:14655762 1.46E-109 dispersed
Chy02g00436 Chy-Chr2:2755036 Chy12g01272 Chy-Chr12:17302183 1.51E-140 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71038 PF07714 PK_Tyr_Ser-Thr 3.80E-68 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00436 - - cmo:103484647 744.191