Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00456 ATGCAAGCATCTCAGAATCGGCAGGCTTCATCTATGATCCATGAGATGGATCCGTACTATTTATCTGATTTTCACGTATTGGGAAACCACGTCTCTCCTGACGCAACCAGCCAGGGAAACAGTGTTAACTTCTCTTCATATAAGGATCAGTTCTTTACTCTGGAATCATTCCCGGCTACTGCTGATCTGAGTGGCTCTAATTCTCCTTCTACTGGGAGTGTTCTGTCGTCTAGGAGCCCCTTCTCACCTCAGGGTTCTCAATCATGCTCATCAGATCAACACCATTCCTTTGAGAACACATGTGGATCACCAATGAGTGGATGCTCTGTAACTGATGAAGACAACGACATAAAGCACAAGCTTAAAGAATTAGAAATTTCTTTGCTGGGGCCTGAATCCGATATTGTGGATAGCTGCTACTGTTCTTTCAGGGGTGGGGCACATCGAGATGCTTCAGTGGCAAGGCGGAACTGGAATCAAGTGGTTGAAATGATTCCTAAACTAAATCTTCAGGACACGCTTATCCATTGTGCCCAAGCAATTCATGATTCCGATCTAAATGTGGCAACACTTTTTATGGATGTTTTAGGGCAGATGGTTTCCGTCTCTGGCAATCCATCCCAGAGATTGGGAGCTTACTTGTTGGAAGGGCTTAGAGCGAGGTTGGAACGATCTGGGAGTGCAATATACAAATCCCTAAAGTGCAAAGAGCCAACAAGCTCTGAACTAATGTCATATATGTCTATTCTATTCCAGATCTGCCCATACTTCAAATTTGGTTACACATCTGCTAATGCTGTAATTTGGGAGGCCATGGTCAATGAACCCATAATCCACATCATTGATTTTCAGATTGCTCAGGGTAGTCAGTATATATCTCTCATCCAGGATCTTGCCAATCGGCCCGGCGGACCCCCAGCTCTTCTTCGCATTACAGGTGTGGATGATTCCCAATCAGCTCATGCTCGAGGAGGGGGACTACAAATTGTGGGACAGAACTTAGCTCAGCTGGCTCAATCAAAAGGAATTCCCTTCCAATTTCATGCTGCTGCAATGTCCGGTTGTGACGTTGAACACAGTAATCTTATAATACAACCAGGAGAAGCGTTGGCTGTAAATTTTCCATACACCTTACACCACATGCCAGATGAGAGCGTGAGCACACAGAATCATCGAGACCGGCTTCTTAGGCTGGTTAAAAGTCTCTCACCGAAAGTAGTAACCATTATTGAGCAGGAATCCAACACCAACACATCCCCATTCCTTCTTCGCTTCATAGAGACGCTAGATTATTACACTGCTATGTTCGAGTCAATAGATGTAGCTCGTTCAAGAGATGACAAGCAGAGAATCAGGGCAGAGCAACACTGTGTGGCCCGAGACATAGTGAACATGGTAGCTTGTGAAGGGTTCGAAAGGGTAGAACGTCATGAACTCCTTGGCAAATGGAGGATGAGAATGAGAATGGCTGGTTTCACTCCATATCCAATGAGCTCATCCGTTACTGGAGCAGTTAGAAATATGTTGAGAGATTTCAATGAGAACTACAGACTCCAAGAAGTTGATGGAGCTATCTACCTTGGATGGAAAAACAGAGCAATGGCAACCGCATCTGCATGGAGATGA 1626 44.96 MQASQNRQASSMIHEMDPYYLSDFHVLGNHVSPDATSQGNSVNFSSYKDQFFTLESFPATADLSGSNSPSTGSVLSSRSPFSPQGSQSCSSDQHHSFENTCGSPMSGCSVTDEDNDIKHKLKELEISLLGPESDIVDSCYCSFRGGAHRDASVARRNWNQVVEMIPKLNLQDTLIHCAQAIHDSDLNVATLFMDVLGQMVSVSGNPSQRLGAYLLEGLRARLERSGSAIYKSLKCKEPTSSELMSYMSILFQICPYFKFGYTSANAVIWEAMVNEPIIHIIDFQIAQGSQYISLIQDLANRPGGPPALLRITGVDDSQSAHARGGGLQIVGQNLAQLAQSKGIPFQFHAAAMSGCDVEHSNLIIQPGEALAVNFPYTLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIIEQESNTNTSPFLLRFIETLDYYTAMFESIDVARSRDDKQRIRAEQHCVARDIVNMVACEGFERVERHELLGKWRMRMRMAGFTPYPMSSSVTGAVRNMLRDFNENYRLQEVDGAIYLGWKNRAMATASAWR* 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2851400 2853025 - Chy2G027230.1 Chy02g00456 219904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00456 541 PANTHER SCARECROW-LIKE PROTEIN 13 12 540 IPR030005 -
Chy02g00456 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 540 IPR005202 -
Chy02g00456 541 MobiDBLite consensus disorder prediction 62 96 - -
Chy02g00456 541 ProSiteProfiles GRAS family profile. 161 541 IPR005202 -
Chy02g00456 541 Pfam GRAS domain family 171 541 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00456 Chy-Chr2:2851400 Chy11g00700 Chy-Chr11:8882365 0 dispersed
Chy02g00456 Chy-Chr2:2851400 Chy04g02153 Chy-Chr4:26695033 2.71E-61 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17448 PF03514 GRAS 3.70E-125 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00456 - - csv:101207883 1072.0