Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00475 ATGGCGTCAATTGCTGGTTCCAAAGCTTCGTCAAATCAGCCACAGCAACCAGCTAATGGTGAAATGGCTAATGGAAAGGATACCGGGTCCTTGCCTCCGCAGATTTCAAAGTTAAGCAAACCTGTATCAGTTATTTCTGACCAGTCTAAAGCAGTGAAGAGTATCTCAAAGAAGGATGTGGAATTATCTTCCGACAAAAAGTCACCAGTATCGAATCAAAATGGATCTGCTAAGTTGTTGACTGAAAAATTTAATTTCAGCATATCGTCTCCTGGTCTGAAACAAACACCAACTGAAGTAGATTCCCCTCTCAATGAAGCTAAATGCTCACCTGGAAGCTCACTAGACCAAGAGAAGAAAACATCAGAATATGGAAGTGTAAAGAGCAGTTCTTTTTCCGGTAAAGTAAGTGATGGGACTAGTTGTCTTGCCAAGACGAGTGGAAGTACAAAGGTTAGCGACCATGGTAACTTTGTTGAGAGTGGAAAGAGCAGTATATGTAGAGGGAGCACAAGCAGTGATATAAGCGACGAGAGCTCTTGCAGTAGTTTTAGTAGTAGTATCAGTAAACCTCACAAAGCAAATGATTTGAGATGGGAAGCCATTCAAGTTGTCCGTGCAAAAGATGGGGCTATGGGATTAGGTCATTTTAGACTTCTGAAGAAGTTGGGTTGTGGGGATATTGGGAGTGTCTATCTCTCTGAGTTAAGGGGAACCAAATGCCATTTCGCAATGAAGGTTATGGATAAAAATACTTTAGCGAGTCGTAAGAAGTTGCTTCGTGCACAGACAGAAAGAGAAATACTTCAATCTCTTGATCACCCCTTCCTTCCAACGTTATACACTCACTTTGAGACAGAAAAATTCTCGTGCTTGGTGATGGAGTTCTGCCCTGGAGGAGACTTGCATACCCTAAGGCAGAGGCAACCAGGGAAGCATTTTCCCGAGCAGGCAGTAAAATTCTATGTAGCAGAGGTTCTTCTTGCACTGGAATACCTGCACATGCTTGGGATTGTGTACCGTGATCTTAAGCCAGAAAATGTCCTTGTGAGAGAAGACGGACACATAATGCTTTCAGACTTTGACCTATCTCTCCGTTGTGCTGTTAACCCGACTCTGGTAAAAAATCTCTCTGCAGAGTCTGAGGCTTTGAGAAAGAACACAGGTTACTGTGTGCAGCCTGCTTGCATTGAGCCGTCCTGCATCCAACCATCTTGTGTAGTTCCTACAACCTGCTTCTCACCTCGTCTCTTTTCTAGTAAGTCAAAGAAGGAACGAAAACCCAAAATTGATTTGGGAAATCAGGTCAGCCCATTGCCAGAGCTCATTGCAGAACCAACCGATGCCCGATCCATGTCTTTTGTAGGAACTCATGAGTACTTGGCACCTGAGATAATCAAGGGTGAAGGCCATGGAAGTGCTGTAGATTGGTGGACTTTTGGAATTTTTCTATATGAGCTACTATTTGGTAAAACTCCTTTTAAGGGGTCTGGAAATCGAGCTACATTATTCAACATTGTCGGTCAGCCTCTTCGGTTTCCAGATGCACCAGTTGTGAGTTTTGCTGCGAAGGATCTGATAAGGGGATTGCTAGTGAAGGAGCCACAACAAAGATTGGCTTATAAACGTGGAGCAACTGAGATCAAGCAGCATCCTTTCTTCGAAGGTGTAAATTGGGCATTAATACGTTGTGCTACTCCTCCTGAAATCCCTAGGCCGGTCGAGATTGAGAGAATACCACATGCAGTAGCGTCAACCAGTGAAAAGGCCGTTGCAATTGCAGCAATTGCTCCAGATAAAAAAGCTTCCGATAATTATCTCGAGTTTGATTTCTTTTAG 1839 43.56 MASIAGSKASSNQPQQPANGEMANGKDTGSLPPQISKLSKPVSVISDQSKAVKSISKKDVELSSDKKSPVSNQNGSAKLLTEKFNFSISSPGLKQTPTEVDSPLNEAKCSPGSSLDQEKKTSEYGSVKSSSFSGKVSDGTSCLAKTSGSTKVSDHGNFVESGKSSICRGSTSSDISDESSCSSFSSSISKPHKANDLRWEAIQVVRAKDGAMGLGHFRLLKKLGCGDIGSVYLSELRGTKCHFAMKVMDKNTLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVNPTLVKNLSAESEALRKNTGYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKERKPKIDLGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNIVGQPLRFPDAPVVSFAAKDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPRPVEIERIPHAVASTSEKAVAIAAIAPDKKASDNYLEFDFF* 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2924268 2927793 - Chy2G027420.1 Chy02g00475 219923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00475 612 Gene3D Transferase(Phosphotransferase) domain 1 301 368 - -
Chy02g00475 612 Gene3D Transferase(Phosphotransferase) domain 1 448 572 - -
Chy02g00475 612 ProSiteProfiles Protein kinase domain profile. 217 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00475 612 CDD STKc_phototropin_like 216 577 - -
Chy02g00475 612 Gene3D Phosphorylase Kinase; domain 1 215 300 - -
Chy02g00475 612 Pfam Protein kinase domain 451 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00475 612 Pfam Protein kinase domain 218 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00475 612 SMART serkin_6 217 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g00475 612 MobiDBLite consensus disorder prediction 1 51 - -
Chy02g00475 612 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 612 - -
Chy02g00475 612 PANTHER FLIPPASE KINASE 1-RELATED 5 612 - -
Chy02g00475 612 MobiDBLite consensus disorder prediction 88 140 - -
Chy02g00475 612 MobiDBLite consensus disorder prediction 1 76 - -
Chy02g00475 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Chy02g00475 612 SUPERFAMILY Protein kinase-like (PK-like) 192 581 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00475 Chy-Chr2:2924268 Chy12g00620 Chy-Chr12:8912134 0 dispersed
Chy05g00118 Chy-Chr5:899509 Chy02g00475 Chy-Chr2:2924268 1.03E-76 dispersed
Chy07g01044 Chy-Chr7:15376101 Chy02g00475 Chy-Chr2:2924268 4.16E-113 dispersed
Chy02g00475 Chy-Chr2:2924268 Chy08g00920 Chy-Chr8:16632692 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71039 PF00069 Pkinase 6.50E-38 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00475 K08286 - csv:101209748 1166.37