Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00491 ATGGACCCCACAAATGGAAATAATGCTACCAGCAAAAGCCCAAATTTGGCCTCAAAGCAGAGACTGCGATGGACACATGATCTTCACGAACGATTTGTTAATGCAGTCGCACAACTTGGTGGTCCAGATCGTGCTACACCCAAAGGCGTCCTTAGAGTAATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGAAATATCGACTTGCAAAATACCTTCCCGACTCCTCGTCTGATGGGAAAAAGACCGACAAGAAGGATTCTAGTGACATTCTATCAAACATTGATGGCTCGTCGGGAATGCAAATTACTGAAGCTCTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTACAGAGACAGCTGCAGTTACGGATTGAAGCCCAAGGCAAGTACTTGAAGAAGATAATCGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGGAGCTCCAGCTGCCTCCGCCTTTACAGCTCCTGCTTCTGGTGATAACTGCCCAGAAGTTGATAAAAACGACCCCTCGACACCCGCGTCCACATCCGAGTTTCCTCGCCAGGAGAAGGTATCAAAGGAACGTGCCCAAGGCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCATTGACGCCTGATTCTGGTTGCCATAGCTCCCCACGTGAGAGTCCGAGGCCAGTGAAGAAGCAAATACAGTCAAAGATGATACTTGCACATCAGATACTGGAGTCTAGTTTAAACTCCACTCACAAGGAATGA 789 46.89 MDPTNGNNATSKSPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKTDKKDSSDILSNIDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPAASAFTAPASGDNCPEVDKNDPSTPASTSEFPRQEKVSKERAQGKSVSIDDSFSSHHEPLTPDSGCHSSPRESPRPVKKQIQSKMILAHQILESSLNSTHKE* 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3008442 3010458 + Chy2G027580.1 Chy02g00491 219939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00491 262 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Chy02g00491 262 Gene3D - 18 77 - -
Chy02g00491 262 MobiDBLite consensus disorder prediction 1 20 - -
Chy02g00491 262 MobiDBLite consensus disorder prediction 79 95 - -
Chy02g00491 262 MobiDBLite consensus disorder prediction 78 101 - -
Chy02g00491 262 SUPERFAMILY Homeodomain-like 18 73 IPR009057 -
Chy02g00491 262 MobiDBLite consensus disorder prediction 166 241 - -
Chy02g00491 262 MobiDBLite consensus disorder prediction 207 228 - -
Chy02g00491 262 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 1 261 - -
Chy02g00491 262 Pfam MYB-CC type transfactor, LHEQLE motif 105 151 IPR025756 -
Chy02g00491 262 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 74 IPR006447 GO:0003677
Chy02g00491 262 Coils Coil 108 128 - -
Chy02g00491 262 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 261 IPR044848 GO:0003700
Chy02g00491 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00491 Chy-Chr2:3008442 Chy04g01721 Chy-Chr4:23582162 6.04E-09 dispersed
Chy02g00490 Chy-Chr2:3000544 Chy02g00491 Chy-Chr2:3008442 3.63E-35 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17451 PF00249 Myb_DNA-binding 8.30E-08 CL0123 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00491 - - csv:101215173 489.96