Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00503 ATGATTGGCTTTCCAGCAGAACTACTGAGCCGAGGACTTCAACTCTCTTTCAAACATTTTGGAGCCTCAGAGCTTAAGAGGGTTCTTTTTAAAGATATCTTCACTGGGACGAGTGGGAGTTACTCATTTGGAGACAGCGCAAATGTAACTCCGAGACCTGAAGTTGTCAACATTGGGGCTTTATTCTCTTTCCGTTCTATGATAGGCAAAGTTGGAAAAATTGCTGTAGAAGCTGCCATCGAGGATGTAAATTCTAATCCATCCATTCTGGGGGGGACGAAACTGAAGCTCAGTTCACATGATACCAACTACAGTGGATTTTTGGGCATCATTGAATCCTTGCGTTTCATGGAGACCAAGACTATGGCCATAATTGGCCCCCAAAATTCTGTAACTGCTCATGTCATATCTCATATTGCAAATGAGGTCCAAGTCCCTCTATTGTCATTTTCAGCAACAGATCCCACACTGTCATCACTTCAGTTTCCTTTCTTTATCAGAACTTCGCAGAATGATCTGTATCAGATGGCTGCAGTAGCTGAAATAGTCGACTACTTCCAATGGAAAGAGGTGATTGCTATCTTTGTCGATGACGATCATGGTAGAAATGGTATTGCTGCATTGGGGGATCAACTTAATGAGAGACGATGCAAGATCTCATTGAAAGTACCATTGAAGCCTGATGCTAGTCGAGATGAGGTCACTGATGCACTTGTTAAGGTGGCTTTAACCGAGTCTCGAATACTTGTTATTCACACTTATGAGACCACAGGTATGGTTGTGCTCAGTGTGGCTCAATATCTTGGATTGACAGGGCCTGGGTACGTTTGGATAGCCACTAACTGGCTTTCTTTGCTACTCGACACAAATTCCCCTCTTCCTTCTGCTTCTATGGAAAATATTCAAGGACTTGTTGCTTTACGTCTTTATACACCAGATTCTGTACTCAAAAGGAATTTTGTTTCAAGGTGGACCAATTTCACTGATGTAAAGTCATCAAGTGGTTCGCTCGGATTGAGTACTTATGGATTATATGCTTATGATACTGTTTGGATACTTGCTCATGCAATAAATGCATTTCTTAATGAAGGTGGAAATCTTTCATTTTCAACACTTTCGAAGTTAACTGGGGTTGATGTTAGAACTTTGAATCTCAACTCTATGAACATCTTCAATGGTGGGAAGACACTACTTGACAAAATTTTAGAAGTCAATTTTACTGGAATAACAGGTTCAGTTGAGTTCACTCCAGAAAGGGATTTAATTCATCCTGCGTTTGAAGTGATCAATATAATCGGCACAGGGGAAAGAAGAATTGGCTATTGGTCTAACTATTCTGGCCTGTCAATTGTGCCTCCTGAAACACTTTACTCGAAACCACCTAACCGAACCAGTTCAAATCAAAAGCTATATGATGTGGTATGGCCTGGACAAGCAACACAGAAGCCTCGTGGGTGGGCATTTCCAAACACTGGGAGACATTTAAGAATTGGAGTTCCGAGACGAGTCAGTTATCAAGAATTTGTCTCACAAGTAGAAGGAACGGACATGTTCACTGGCTACTGCATCGATGTCTTCACTGCAGCAATCAATTTCTTGCCTTATGCAGTCCCCTATAAGTTAATTCCTTTTGGGGATGGCGTTACTAATCCTAGTGAAACTGAATTGATTCGACTAATCACAACTGGCGTCTATGATGGAGCGATAGGGGACATTGCAATCATCACAAACCGAACCAGGATGGCTGATTTTACACAACCATACATAGAGTCTGGCCTAGTAGTTGTAGCCCCAGTGAAGAAGTTGAATTCTAGCGCTTGGGCCTTTTTACAACCGTTCACTGCAAGGATGTGGTGTGCTACCGCTGCTTCTTTTATTGTAATAGGAGCAGTTGTTTGGATTTTGGAACATAGGATAAATGATGATTTTCGTGGCCCTCCGAAGAAACAAGTTATCACCATTCTATGGTTCAGCTTTTCAACTCTATTCTTCTCTCACCGGCAAAATACAGTCAGTGCCCTCGGTCGCCTCGTGCTGATCATATGGCTGTTTGTTGTTCTAATTATCAATTCAAGCTATACTGCAAATTTGACTTCTATCCTTACAGTTCAACAACTTTCTTCTCCTGTGAAGGGGATTGAAACTTTGATTTCGAACAATGAACCAATTGGCTACCAGCAGGGTTCATTTGCTCGAAACTACTTGATTGAGGAACTTGGCATTCATGAGTCGAGACTCGTTCCACTCATCTCAGCAGAACACTATGTCAAAGCCTTGAATGATGGGCCAACAAATAATGGTGTTGCTGCTATTGTCGATGAGCGAGCATATGTAGAGCTCTTCCTTTCAACCCGTTGTGAATACAGTATTGTTGGCCAAGAGTTCACAAAAAATGGGTGGGGATTTGCTTTCCCTCGCGACTCTCCATTAGCAGTTGACATGTCCACAGCTATTTTAAGACTGTCCGAAACCGGAGATCTTCAAAGAATCCATGACAAATGGTTAATGAAAAGTGCCTGCACATCACAAGCCTCAAAAATTGAGGTGGATCGACTTCAGCTAAATAGCTTTTGGGGACTTTTTCTAATATGTGGATTAGCCTGTGTGCTCGCTCTATCAATATACCTCTGTCAAACGGTGCGCCAATATAGTGAACATTATGCTGAAAAACTCGGGTCTTCTGAGCAATCATCTAGATCTGCAAGCCTACATAGATTCCTTTCTTTTGCAGATGAGAAAGAAGAAGTCTTCAAAAGTCAATCCAAGCGAAGAAGAATGCAAGAGGCTTCAGTTAGAAGCCTGAATGAAGAAAATTCAACAGGCAGTTCAAGAAAATTTGGCCATGGTTATCCTGATGGAATTGATGCATGA 2871 41.8 MIGFPAELLSRGLQLSFKHFGASELKRVLFKDIFTGTSGSYSFGDSANVTPRPEVVNIGALFSFRSMIGKVGKIAVEAAIEDVNSNPSILGGTKLKLSSHDTNYSGFLGIIESLRFMETKTMAIIGPQNSVTAHVISHIANEVQVPLLSFSATDPTLSSLQFPFFIRTSQNDLYQMAAVAEIVDYFQWKEVIAIFVDDDHGRNGIAALGDQLNERRCKISLKVPLKPDASRDEVTDALVKVALTESRILVIHTYETTGMVVLSVAQYLGLTGPGYVWIATNWLSLLLDTNSPLPSASMENIQGLVALRLYTPDSVLKRNFVSRWTNFTDVKSSSGSLGLSTYGLYAYDTVWILAHAINAFLNEGGNLSFSTLSKLTGVDVRTLNLNSMNIFNGGKTLLDKILEVNFTGITGSVEFTPERDLIHPAFEVINIIGTGERRIGYWSNYSGLSIVPPETLYSKPPNRTSSNQKLYDVVWPGQATQKPRGWAFPNTGRHLRIGVPRRVSYQEFVSQVEGTDMFTGYCIDVFTAAINFLPYAVPYKLIPFGDGVTNPSETELIRLITTGVYDGAIGDIAIITNRTRMADFTQPYIESGLVVVAPVKKLNSSAWAFLQPFTARMWCATAASFIVIGAVVWILEHRINDDFRGPPKKQVITILWFSFSTLFFSHRQNTVSALGRLVLIIWLFVVLIINSSYTANLTSILTVQQLSSPVKGIETLISNNEPIGYQQGSFARNYLIEELGIHESRLVPLISAEHYVKALNDGPTNNGVAAIVDERAYVELFLSTRCEYSIVGQEFTKNGWGFAFPRDSPLAVDMSTAILRLSETGDLQRIHDKWLMKSACTSQASKIEVDRLQLNSFWGLFLICGLACVLALSIYLCQTVRQYSEHYAEKLGSSEQSSRSASLHRFLSFADEKEEVFKSQSKRRRMQEASVRSLNEENSTGSSRKFGHGYPDGIDA* 957
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3072710 3076869 - Chy2G027700.1 Chy02g00503 219951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00503 956 Gene3D - 801 834 - -
Chy02g00503 956 MobiDBLite consensus disorder prediction 914 931 - -
Chy02g00503 956 Pfam Ligand-gated ion channel 836 868 IPR001320 GO:0015276|GO:0016020
Chy02g00503 956 Pfam Bacterial extracellular solute-binding proteins, family 3 518 835 IPR001638 -
Chy02g00503 956 MobiDBLite consensus disorder prediction 914 956 - -
Chy02g00503 956 CDD GluR_Plant 495 835 - -
Chy02g00503 956 Gene3D - 491 605 - -
Chy02g00503 956 SUPERFAMILY Periplasmic binding protein-like II 473 838 - -
Chy02g00503 956 Pfam Receptor family ligand binding region 74 432 IPR001828 -
Chy02g00503 956 Gene3D - 74 423 - -
Chy02g00503 956 PIRSF IGluLR_plant 29 948 IPR017103 -
Chy02g00503 956 Gene3D - 766 800 - -
Chy02g00503 956 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 129 157 - -
Chy02g00503 956 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 346 358 - -
Chy02g00503 956 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 69 85 - -
Chy02g00503 956 SUPERFAMILY Periplasmic binding protein-like I 52 486 IPR028082 -
Chy02g00503 956 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 945 - -
Chy02g00503 956 Gene3D - 606 732 - -
Chy02g00503 956 Gene3D - 171 448 - -
Chy02g00503 956 CDD PBP1_GABAb_receptor_plant 57 452 IPR044440 -
Chy02g00503 956 PANTHER GLUTAMATE RECEPTOR 3.6 36 945 - -
Chy02g00503 956 SMART GluR_14 496 837 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00586 Chy-Chr1:4180344 Chy02g00503 Chy-Chr2:3072710 0 dispersed
Chy02g00503 Chy-Chr2:3072710 Chy11g00602 Chy-Chr11:6997659 0 dispersed
Chy02g00503 Chy-Chr2:3072710 Chy07g00408 Chy-Chr7:3234623 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00503 K05387 - csv:101213408 1764.97