Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g00511 ATGGCGTTTTCCGATGAGAACAATTCCAACTTTATCAAACCCACTTCTTTTCTTCCAGGAGGAGGGTTGGAGAAGAGTGGGAGGGCTTTTGGGCAGGAGATTAGTAGGGTTAATAGTAATCGGAGAGCTCTTAATGCTATTAATCAGAATTCTGTGGTGAATCAAGCTTACCCTTGTGTTGTTAACAAGAGAGGATTCTCAGGAAAGCAAGAGATTTGCGAGAAGAAGCAGGTTGATCCGTTCCATAGACCCATTACAAGGAAATTTGCTGCTCAAATTGCTAGCAGTCAACAGCTTCATCATCATCTTCAGGAAAATAATAAGCCTAACTCATATCTTACAAACTCAAATGCATTTGGACATTCCATATTTGTAGACGAGGACTGCAAAACACTAGAAAATGACCATCCAGTCCCCATGTTCTTGGAGAAATCAGAACCATCATTGTCTCAGGAAGCAAGCCAAATGGAGGAGGTTGAAATGGAGGATATAGCAGAGGAGGAAGATCCAGTAATCGACATTGACATTATTGATTCCGATAACCCGCTTGCCGTTGTCGAGTACGTGGACGATCTCTACGCTCACTACAGAAAAATTGAGAACTCGAGCTGTGTTCCCCCCAATTACATGACCAAACAAGTTGACATTAATGAGAAGATGAGAGCTATTCTAATCGATTGGCTTATAGAGGTGCATGACAAGTTTGATCTCATGGGAGAAACATTGTTTCTCACAGTGAATCTCATAGACAGATTTTTGGCACAGAAAAACGTAGTGAGAAAGAAGCTTCAGCTTGTTGGTTTGGTTTCTATGCTGTTAGCTTGCAAATATGAAGAAGTTTCTGTTCCTGTTGTGGGTGATTTGATTCTTATTTCTGATAAAGCTTACTCTAGAAAAGAAGTTCTTGAAATGGAGACAGTAATGCTCAACTGTTTGCAGTTTAATATGTCAGTTCCCACACCCTTTGTTTTCCTCCAAAGGTTCCTTAAAGCTGCTCAATCTGACAAAAAGCTTCAGCTAATGGCATTCTTCTTGATCGAACTATCGCTCGTCGAGTATGAAATGCTGAGGTTCCCACCCTCGCTGCTAGCGGCAGCGGCAATTTACACAGCTCAATGTACTCTCACCAGAGTCGATGGTGGTTGGAGCCGAACCTGCGAGTGGCATTCCAGCTACTCAGAAAATCAGCTCCTAGAATGCTCGAGACTAATGGTGGGGTTCCATCAAAATGCAGCAACCGGGAAGCTCACCGGAGTCCATAGGAAGTACTGTACATCAAAATTTAACTACACTGCAAAATGTGAACCTGCACATTTTCTTTTGCAGACTCAGCAATAG 1338 42.38 MAFSDENNSNFIKPTSFLPGGGLEKSGRAFGQEISRVNSNRRALNAINQNSVVNQAYPCVVNKRGFSGKQEICEKKQVDPFHRPITRKFAAQIASSQQLHHHLQENNKPNSYLTNSNAFGHSIFVDEDCKTLENDHPVPMFLEKSEPSLSQEASQMEEVEMEDIAEEEDPVIDIDIIDSDNPLAVVEYVDDLYAHYRKIENSSCVPPNYMTKQVDINEKMRAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLAQKNVVRKKLQLVGLVSMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMETVMLNCLQFNMSVPTPFVFLQRFLKAAQSDKKLQLMAFFLIELSLVEYEMLRFPPSLLAAAAIYTAQCTLTRVDGGWSRTCEWHSSYSENQLLECSRLMVGFHQNAATGKLTGVHRKYCTSKFNYTAKCEPAHFLLQTQQ* 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3107784 3110059 + Chy2G027780.1 Chy02g00511 219959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g00511 445 Gene3D - 191 432 - -
Chy02g00511 445 Pfam Cyclin, N-terminal domain 192 317 IPR006671 -
Chy02g00511 445 PANTHER CYCLINS 30 440 IPR039361 -
Chy02g00511 445 PIRSF Cyclin_A_B_D_E 23 445 IPR039361 -
Chy02g00511 445 CDD CYCLIN 220 309 IPR013763 -
Chy02g00511 445 PANTHER CYCLIN-B2-1 30 440 - -
Chy02g00511 445 SUPERFAMILY Cyclin-like 180 316 IPR036915 -
Chy02g00511 445 SUPERFAMILY Cyclin-like 318 437 IPR036915 -
Chy02g00511 445 CDD CYCLIN 317 405 IPR013763 -
Chy02g00511 445 Pfam Cyclin, C-terminal domain 319 435 IPR004367 -
Chy02g00511 445 SMART Cyclin_C_2 319 437 IPR004367 -
Chy02g00511 445 Gene3D - 205 317 - -
Chy02g00511 445 SMART cyclin_7 323 406 IPR013763 -
Chy02g00511 445 SMART cyclin_7 226 310 IPR013763 -
Chy02g00511 445 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00511 Chy-Chr2:3107784 Chy05g00192 Chy-Chr5:1517240 1.36E-82 dispersed
Chy02g00511 Chy-Chr2:3107784 Chy07g00389 Chy-Chr7:3102293 2.98E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g00511 K21777 - csv:101216622 853.973